RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-222ENST00000498810 KHSRPQ92945 711 aaKnown RBP eCLIP14.47□□□□□ -0.09
CDK11A-222ENST00000498810 RTN4Q9NQC3 1192 aaKnown RBP14.47□□□□□ -0.09
CDK11A-222ENST00000498810 TXNRD1Q16881 649 aa14.46□□□□□ -0.09
CDK11A-222ENST00000498810 KRTAP3-3Q9BYR6 98 aa14.46□□□□□ -0.09
CDK11A-222ENST00000498810 KRTAP3-2Q9BYR7 98 aa14.46□□□□□ -0.09
CDK11A-222ENST00000498810 STK32BQ9NY57 414 aa14.46□□□□□ -0.09
CDK11A-222ENST00000498810 SPG7Q9UQ90 795 aa14.46□□□□□ -0.09
CDK11A-222ENST00000498810 EIF4A2Q14240 407 aaKnown RBP14.45□□□□□ -0.1
CDK11A-222ENST00000498810 TOGARAM1Q9Y4F4 1720 aa14.45□□□□□ -0.1
CDK11A-222ENST00000498810 LY75O60449 1722 aa14.44□□□□□ -0.1
CDK11A-222ENST00000498810 EYA1Q99502 592 aa14.44□□□□□ -0.1
CDK11A-222ENST00000498810 PRIM1P49642 420 aaKnown RBP14.43□□□□□ -0.1
CDK11A-222ENST00000498810 DSG2Q14126 1118 aa14.43□□□□□ -0.1
CDK11A-222ENST00000498810 VARS2Q5ST30 1063 aaKnown RBP14.43□□□□□ -0.1
CDK11A-222ENST00000498810 PCDHGA4Q9Y5G9 962 aa14.43□□□□□ -0.1
CDK11A-222ENST00000498810 NCAPD2Q15021 1401 aa14.42□□□□□ -0.1
CDK11A-222ENST00000498810 PLPP6Q8IY26 295 aa14.42□□□□□ -0.1
CDK11A-222ENST00000498810 CRISPLD2Q9H0B8 497 aa14.42□□□□□ -0.1
CDK11A-222ENST00000498810 PPP1R1BQ9UD71 204 aaPredicted RBP14.42□□□□□ -0.1
CDK11A-222ENST00000498810 CASZ1Q86V15 1759 aa14.42□□□□□ -0.1
CDK11A-222ENST00000498810 ANO8Q9HCE9 1232 aaPredicted RBP14.41□□□□□ -0.1
CDK11A-222ENST00000498810 C5P01031 1676 aa14.41□□□□□ -0.1
CDK11A-222ENST00000498810 VIRMAQ69YN4 1812 aaKnown RBP14.41□□□□□ -0.1
CDK11A-222ENST00000498810 PAPPAQ13219 1627 aa14.41□□□□□ -0.1
CDK11A-222ENST00000498810 IGSF1Q8N6C5 1336 aa14.41□□□□□ -0.1
CDK11A-222ENST00000498810 TUBGCP6Q96RT7 1819 aa14.4□□□□□ -0.1
CDK11A-222ENST00000498810 QSER1Q2KHR3 1735 aa14.39□□□□□ -0.11
CDK11A-222ENST00000498810 MPRIPQ6WCQ1 1025 aa14.39□□□□□ -0.11
CDK11A-222ENST00000498810 PTCD2Q8WV60 388 aaKnown RBP14.39□□□□□ -0.11
CDK11A-222ENST00000498810 ZNF316A6NFI3 1004 aaPredicted RBP14.38□□□□□ -0.11
CDK11A-222ENST00000498810 CYP27B1O15528 508 aa14.38□□□□□ -0.11
CDK11A-222ENST00000498810 SLC27A3Q5K4L6 730 aa14.38□□□□□ -0.11
CDK11A-222ENST00000498810 SPNS2Q8IVW8 549 aa14.38□□□□□ -0.11
CDK11A-222ENST00000498810 IFNL2Q8IZJ0 200 aa14.38□□□□□ -0.11
CDK11A-222ENST00000498810 SPON1Q9HCB6 807 aa14.38□□□□□ -0.11
CDK11A-222ENST00000498810 CCNL1Q9UK58 526 aaPredicted RBP14.38□□□□□ -0.11
CDK11A-222ENST00000498810 TAF1LQ8IZX4 1826 aa14.38□□□□□ -0.11
CDK11A-222ENST00000498810 PLEKHG2Q9H7P9 1386 aa14.37□□□□□ -0.11
CDK11A-222ENST00000498810 MTHFSP49914 203 aa14.37□□□□□ -0.11
CDK11A-222ENST00000498810 SLC15A2Q16348 729 aa14.37□□□□□ -0.11
CDK11A-222ENST00000498810 PLEKHO1Q53GL0 409 aaPredicted RBP14.37□□□□□ -0.11
CDK11A-222ENST00000498810 C1orf141Q5JVX7 400 aa14.37□□□□□ -0.11
CDK11A-222ENST00000498810 ZNF530Q6P9A1 599 aaPredicted RBP14.37□□□□□ -0.11
CDK11A-222ENST00000498810 ZNF687Q8N1G0 1237 aa14.37□□□□□ -0.11
CDK11A-222ENST00000498810 TMOD3Q9NYL9 352 aa14.37□□□□□ -0.11
CDK11A-222ENST00000498810 PALLDQ8WX93 1383 aa14.36□□□□□ -0.11
CDK11A-222ENST00000498810 NPC1L1Q9UHC9 1359 aa14.36□□□□□ -0.11
CDK11A-222ENST00000498810 NUDT7P0C024 238 aa14.36□□□□□ -0.11
CDK11A-222ENST00000498810 SULT6B1Q6IMI4 303 aa14.36□□□□□ -0.11
CDK11A-222ENST00000498810 PER1O15534 1290 aaPredicted RBP14.35□□□□□ -0.11
CDK11A-222ENST00000498810 DIAPH1O60610 1272 aaKnown RBP14.35□□□□□ -0.11
CDK11A-222ENST00000498810 HSP90AB1P08238 724 aaKnown RBP14.35□□□□□ -0.11
CDK11A-222ENST00000498810 PHKG2P15735 406 aa14.35□□□□□ -0.11
CDK11A-222ENST00000498810 AMOTQ4VCS5 1084 aa14.35□□□□□ -0.11
CDK11A-222ENST00000498810 BBXQ8WY36 941 aaPredicted RBP14.35□□□□□ -0.11
CDK11A-222ENST00000498810 SMARCC1Q92922 1105 aaPredicted RBP14.35□□□□□ -0.11
CDK11A-222ENST00000498810 CFAP53Q96M91 514 aa14.35□□□□□ -0.11
CDK11A-222ENST00000498810 SCN11AQ9UI33 1791 aa14.34□□□□□ -0.11
CDK11A-222ENST00000498810 ZBTB7AO95365 584 aa14.34□□□□□ -0.11
CDK11A-222ENST00000498810 HMGB2P26583 209 aaKnown RBP14.34□□□□□ -0.11
CDK11A-222ENST00000498810 AEBP1Q8IUX7 1158 aa14.34□□□□□ -0.11
CDK11A-222ENST00000498810 TFCP2L1Q9NZI6 479 aa14.34□□□□□ -0.11
CDK11A-222ENST00000498810 U2SURPO15042 1029 aaKnown RBP14.33□□□□□ -0.12
CDK11A-222ENST00000498810 KCNQ4P56696 695 aa14.33□□□□□ -0.12
CDK11A-222ENST00000498810 HMOX1P09601 288 aa14.32□□□□□ -0.12
CDK11A-222ENST00000498810 PDE4AP27815 886 aa14.32□□□□□ -0.12
CDK11A-222ENST00000498810 IL13P35225 146 aa14.32□□□□□ -0.12
CDK11A-222ENST00000498810 ZNF827Q17R98 1081 aa14.32□□□□□ -0.12
CDK11A-222ENST00000498810 LRRC4BQ9NT99 713 aa14.32□□□□□ -0.12
CDK11A-222ENST00000498810 C4BP0C0L5 1744 aa14.32□□□□□ -0.12
CDK11A-222ENST00000498810 KDRP35968 1356 aa14.31□□□□□ -0.12
CDK11A-222ENST00000498810 SRCAPQ6ZRS2 3230 aa14.3□□□□□ -0.12
CDK11A-222ENST00000498810 CABP4P57796 275 aa14.3□□□□□ -0.12
CDK11A-222ENST00000498810 DCAF5Q96JK2 942 aa14.3□□□□□ -0.12
CDK11A-222ENST00000498810 AK7Q96M32 723 aa14.3□□□□□ -0.12
CDK11A-222ENST00000498810 MTFR1LQ9H019 292 aa14.3□□□□□ -0.12
CDK11A-222ENST00000498810 PPP1R15BQ5SWA1 713 aa14.29□□□□□ -0.12
CDK11A-222ENST00000498810 PIGBQ92521 554 aa14.29□□□□□ -0.12
CDK11A-222ENST00000498810 PDGFDQ9GZP0 370 aaPredicted RBP14.29□□□□□ -0.12
CDK11A-222ENST00000498810 LHX6Q9UPM6 363 aa14.29□□□□□ -0.12
CDK11A-222ENST00000498810 COL3A1P02461 1466 aaPredicted RBP14.29□□□□□ -0.12
CDK11A-222ENST00000498810 KDM6AO15550 1401 aaPredicted RBP14.28□□□□□ -0.12
CDK11A-222ENST00000498810 MMRN1Q13201 1228 aa14.28□□□□□ -0.12
CDK11A-222ENST00000498810 UBR3Q6ZT12 1888 aa14.28□□□□□ -0.12
CDK11A-222ENST00000498810 NUDCQ9Y266 331 aa14.28□□□□□ -0.12
CDK11A-222ENST00000498810 ERVV-2B6SEH9 535 aa14.27□□□□□ -0.13
CDK11A-222ENST00000498810 POLD1P28340 1107 aa14.27□□□□□ -0.13
CDK11A-222ENST00000498810 PNPLA7Q6ZV29 1317 aa14.26□□□□□ -0.13
CDK11A-222ENST00000498810 AKAP4Q5JQC9 854 aa14.26□□□□□ -0.13
CDK11A-222ENST00000498810 OXER1Q8TDS5 423 aa14.26□□□□□ -0.13
CDK11A-222ENST00000498810 COL5A3P25940 1745 aaPredicted RBP14.26□□□□□ -0.13
CDK11A-222ENST00000498810 LOC102724428A0A0B4J2F2 783 aa14.25□□□□□ -0.13
CDK11A-222ENST00000498810 PHF14O94880 888 aa14.25□□□□□ -0.13
CDK11A-222ENST00000498810 PPP2R1AP30153 589 aa14.25□□□□□ -0.13
CDK11A-222ENST00000498810 ATP6V1AP38606 617 aa14.25□□□□□ -0.13
CDK11A-222ENST00000498810 SIK1P57059 783 aa14.25□□□□□ -0.13
CDK11A-222ENST00000498810 ASAP1Q9ULH1 1129 aa14.25□□□□□ -0.13
CDK11A-222ENST00000498810 ZNF831Q5JPB2 1677 aa14.24□□□□□ -0.13
CDK11A-222ENST00000498810 NEFMP07197 916 aa14.24□□□□□ -0.13
CDK11A-222ENST00000498810 MFSD10Q14728 455 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms