RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 ZBTB47Q9UFB7 747 aaPredicted RBP7.41□□□□□ -1.22
CSTF1-207ENST00000498689 TRIM35Q9UPQ4 493 aa7.41□□□□□ -1.22
CSTF1-207ENST00000498689 MINK1Q8N4C8 1332 aaPredicted RBP7.41□□□□□ -1.22
CSTF1-207ENST00000498689 LTN1O94822 1766 aa7.41□□□□□ -1.22
CSTF1-207ENST00000498689 AFDNP55196 1824 aaKnown RBP7.41□□□□□ -1.22
CSTF1-207ENST00000498689 NUBP1P53384 320 aa7.4□□□□□ -1.22
CSTF1-207ENST00000498689 FKBP8Q14318 412 aa7.4□□□□□ -1.22
CSTF1-207ENST00000498689 SIRT1Q96EB6 747 aa7.4□□□□□ -1.22
CSTF1-207ENST00000498689 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.39□□□□□ -1.23
CSTF1-207ENST00000498689 DALRD3Q5D0E6 543 aaKnown RBP7.39□□□□□ -1.23
CSTF1-207ENST00000498689 LCE2DQ5TA82 110 aaPredicted RBP7.39□□□□□ -1.23
CSTF1-207ENST00000498689 FLAD1Q8NFF5 587 aa7.39□□□□□ -1.23
CSTF1-207ENST00000498689 PIM2Q9P1W9 311 aa7.39□□□□□ -1.23
CSTF1-207ENST00000498689 RPGRIP1LQ68CZ1 1315 aa7.38□□□□□ -1.23
CSTF1-207ENST00000498689 CSB-PGBD3P0DP91 1061 aa7.38□□□□□ -1.23
CSTF1-207ENST00000498689 LMNB1P20700 586 aa7.38□□□□□ -1.23
CSTF1-207ENST00000498689 LDHDQ86WU2 507 aa7.38□□□□□ -1.23
CSTF1-207ENST00000498689 IFNL1Q8IU54 200 aa7.38□□□□□ -1.23
CSTF1-207ENST00000498689 FAM212AQ96EL1 285 aa7.38□□□□□ -1.23
CSTF1-207ENST00000498689 HPS5Q9UPZ3 1129 aa7.38□□□□□ -1.23
CSTF1-207ENST00000498689 TTC28Q96AY4 2481 aa7.38□□□□□ -1.23
CSTF1-207ENST00000498689 PIK3C2GO75747 1445 aa7.37□□□□□ -1.23
CSTF1-207ENST00000498689 CPSF1Q10570 1443 aaKnown RBP7.37□□□□□ -1.23
CSTF1-207ENST00000498689 ANKRD36BQ8N2N9 1353 aa7.37□□□□□ -1.23
CSTF1-207ENST00000498689 CCDC7Q96M83 1385 aa7.37□□□□□ -1.23
CSTF1-207ENST00000498689 DDNO94850 711 aaPredicted RBP7.37□□□□□ -1.23
CSTF1-207ENST00000498689 CHRNA5P30532 468 aa7.37□□□□□ -1.23
CSTF1-207ENST00000498689 SNX27Q96L92 541 aa7.37□□□□□ -1.23
CSTF1-207ENST00000498689 ACEP12821 1306 aa7.36□□□□□ -1.23
CSTF1-207ENST00000498689 PLA2G5P39877 138 aa7.36□□□□□ -1.23
CSTF1-207ENST00000498689 MAP1SQ66K74 1059 aaPredicted RBP7.36□□□□□ -1.23
CSTF1-207ENST00000498689 DDX54Q8TDD1 881 aaKnown RBP7.36□□□□□ -1.23
CSTF1-207ENST00000498689 ZIC5Q96T25 663 aa7.36□□□□□ -1.23
CSTF1-207ENST00000498689 TMEM106CQ9BVX2 250 aa7.36□□□□□ -1.23
CSTF1-207ENST00000498689 POLR3AO14802 1390 aaPredicted RBP7.35□□□□□ -1.23
CSTF1-207ENST00000498689 WASLO00401 505 aaPredicted RBP7.35□□□□□ -1.23
CSTF1-207ENST00000498689 CIAPIN1Q6FI81 312 aa7.35□□□□□ -1.23
CSTF1-207ENST00000498689 NLRP13Q86W25 1043 aa7.35□□□□□ -1.23
CSTF1-207ENST00000498689 MYH14Q7Z406 1995 aaKnown RBP7.35□□□□□ -1.23
CSTF1-207ENST00000498689 USP47Q96K76 1375 aa7.34□□□□□ -1.23
CSTF1-207ENST00000498689 NFKBIEO00221 500 aa7.34□□□□□ -1.23
CSTF1-207ENST00000498689 CA12O43570 354 aa7.34□□□□□ -1.23
CSTF1-207ENST00000498689 IL2RBP14784 551 aa7.34□□□□□ -1.23
CSTF1-207ENST00000498689 MAP2K2P36507 400 aa7.34□□□□□ -1.23
CSTF1-207ENST00000498689 ECE1P42892 770 aa7.34□□□□□ -1.23
CSTF1-207ENST00000498689 EAPPQ56P03 285 aaPredicted RBP7.34□□□□□ -1.23
CSTF1-207ENST00000498689 IER5LQ5T953 404 aa7.34□□□□□ -1.23
CSTF1-207ENST00000498689 DCAF8Q5TAQ9 597 aa7.34□□□□□ -1.23
CSTF1-207ENST00000498689 DPY19L2Q6NUT2 758 aa7.34□□□□□ -1.23
CSTF1-207ENST00000498689 AK7Q96M32 723 aa7.34□□□□□ -1.23
CSTF1-207ENST00000498689 TAF1DQ9H5J8 278 aaPredicted RBP7.34□□□□□ -1.23
CSTF1-207ENST00000498689 POGKQ9P215 609 aa7.34□□□□□ -1.23
CSTF1-207ENST00000498689 CNTROBQ8N137 903 aa7.33□□□□□ -1.24
CSTF1-207ENST00000498689 NUDT16Q96DE0 195 aaKnown RBP7.33□□□□□ -1.24
CSTF1-207ENST00000498689 NSD3Q9BZ95 1437 aa7.33□□□□□ -1.24
CSTF1-207ENST00000498689 PYGBP11216 843 aa7.32□□□□□ -1.24
CSTF1-207ENST00000498689 PLCG2P16885 1265 aa7.32□□□□□ -1.24
CSTF1-207ENST00000498689 BRPF1P55201 1214 aaPredicted RBP7.32□□□□□ -1.24
CSTF1-207ENST00000498689 CST9Q5W186 159 aa7.32□□□□□ -1.24
CSTF1-207ENST00000498689 SLAIN1Q8ND83 568 aa7.32□□□□□ -1.24
CSTF1-207ENST00000498689 DDX21Q9NR30 783 aaKnown RBP eCLIP7.32□□□□□ -1.24
CSTF1-207ENST00000498689 CCDC87Q9NVE4 849 aa7.32□□□□□ -1.24
CSTF1-207ENST00000498689 EIF3AQ14152 1382 aaKnown RBP7.32□□□□□ -1.24
CSTF1-207ENST00000498689 POLR2AP24928 1970 aaKnown RBP7.31□□□□□ -1.24
CSTF1-207ENST00000498689 SOX12O15370 315 aa7.31□□□□□ -1.24
CSTF1-207ENST00000498689 ARHGEF25Q86VW2 580 aa7.31□□□□□ -1.24
CSTF1-207ENST00000498689 ANKRD31Q8N7Z5 1873 aa7.31□□□□□ -1.24
CSTF1-207ENST00000498689 FAM122AQ96E09 287 aa7.31□□□□□ -1.24
CSTF1-207ENST00000498689 RBM27Q9P2N5 1060 aaKnown RBP7.31□□□□□ -1.24
CSTF1-207ENST00000498689 NFAT5O94916 1531 aa7.31□□□□□ -1.24
CSTF1-207ENST00000498689 COL5A3P25940 1745 aaPredicted RBP7.3□□□□□ -1.24
CSTF1-207ENST00000498689 SOX1O00570 391 aaPredicted RBP7.3□□□□□ -1.24
CSTF1-207ENST00000498689 SSFA2P28290 1259 aa7.3□□□□□ -1.24
CSTF1-207ENST00000498689 NLRP6P59044 892 aa7.3□□□□□ -1.24
CSTF1-207ENST00000498689 CFAP70Q5T0N1 1121 aa7.3□□□□□ -1.24
CSTF1-207ENST00000498689 CTU1Q7Z7A3 348 aaKnown RBP7.3□□□□□ -1.24
CSTF1-207ENST00000498689 CCDC24Q8N4L8 307 aa7.3□□□□□ -1.24
CSTF1-207ENST00000498689 LINC00116Q8NCU8 138 aa7.3□□□□□ -1.24
CSTF1-207ENST00000498689 TLL2Q9Y6L7 1015 aa7.3□□□□□ -1.24
CSTF1-207ENST00000498689 FAM208AQ9UK61 1670 aaKnown RBP7.3□□□□□ -1.24
CSTF1-207ENST00000498689 PALLDQ8WX93 1383 aa7.3□□□□□ -1.24
CSTF1-207ENST00000498689 COL11A2P13942 1736 aaPredicted RBP7.3□□□□□ -1.24
CSTF1-207ENST00000498689 ERBB4Q15303 1308 aa7.29□□□□□ -1.24
CSTF1-207ENST00000498689 H0YGN5 161 aa7.29□□□□□ -1.24
CSTF1-207ENST00000498689 TRAF5O00463 557 aa7.29□□□□□ -1.24
CSTF1-207ENST00000498689 NBPF1Q3BBV0 1214 aa7.29□□□□□ -1.24
CSTF1-207ENST00000498689 RGL3Q3MIN7 710 aa7.29□□□□□ -1.24
CSTF1-207ENST00000498689 ERFEQ4G0M1 354 aa7.29□□□□□ -1.24
CSTF1-207ENST00000498689 NLRP2Q9NX02 1062 aa7.29□□□□□ -1.24
CSTF1-207ENST00000498689 SLX4Q8IY92 1834 aa7.29□□□□□ -1.24
CSTF1-207ENST00000498689 LRCH3Q96II8 777 aa7.28□□□□□ -1.24
CSTF1-207ENST00000498689 PCDHB8Q9UN66 801 aa7.28□□□□□ -1.24
CSTF1-207ENST00000498689 ADGRB1O14514 1584 aa7.28□□□□□ -1.24
CSTF1-207ENST00000498689 PIEZO1Q92508 2521 aa7.28□□□□□ -1.24
CSTF1-207ENST00000498689 NRXN2Q9P2S2 1712 aa7.27□□□□□ -1.25
CSTF1-207ENST00000498689 BDP1A6H8Y1 2624 aa7.27□□□□□ -1.25
CSTF1-207ENST00000498689 GNPATO15228 680 aa7.27□□□□□ -1.25
CSTF1-207ENST00000498689 TMF1P82094 1093 aa7.27□□□□□ -1.25
CSTF1-207ENST00000498689 CDAN1Q8IWY9 1227 aa7.27□□□□□ -1.25
CSTF1-207ENST00000498689 C14orf93Q9H972 538 aaKnown RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms