RNA–Protein interactions for RNA: ENST00000498529.5

CSNK1E-214, Transcript of casein kinase 1 epsilon, humanhuman

TSL 3

Gene CSNK1E, Length 381 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-214ENST00000498529 ITPK1Q13572 414 aa7.96□□□□□ -1.14
CSNK1E-214ENST00000498529 RRS1Q15050 365 aaKnown RBP7.96□□□□□ -1.14
CSNK1E-214ENST00000498529 FLAD1Q8NFF5 587 aa7.96□□□□□ -1.14
CSNK1E-214ENST00000498529 SYTL4Q96C24 671 aaPredicted RBP7.96□□□□□ -1.14
CSNK1E-214ENST00000498529 CARD11Q9BXL7 1154 aa7.96□□□□□ -1.14
CSNK1E-214ENST00000498529 SCUBE2Q9NQ36 999 aa7.96□□□□□ -1.14
CSNK1E-214ENST00000498529 KCPQ6ZWJ8 1503 aa7.95□□□□□ -1.14
CSNK1E-214ENST00000498529 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.95□□□□□ -1.14
CSNK1E-214ENST00000498529 CDAN1Q8IWY9 1227 aa7.95□□□□□ -1.14
CSNK1E-214ENST00000498529 JMYQ8N9B5 988 aa7.95□□□□□ -1.14
CSNK1E-214ENST00000498529 PIGBQ92521 554 aa7.95□□□□□ -1.14
CSNK1E-214ENST00000498529 METRNQ9UJH8 293 aa7.95□□□□□ -1.14
CSNK1E-214ENST00000498529 ADAMTSL1Q8N6G6 1762 aa7.94□□□□□ -1.14
CSNK1E-214ENST00000498529 HSP90AB2PQ58FF8 381 aa7.94□□□□□ -1.14
CSNK1E-214ENST00000498529 TMC1Q8TDI8 760 aa7.94□□□□□ -1.14
CSNK1E-214ENST00000498529 COG3Q96JB2 828 aa7.94□□□□□ -1.14
CSNK1E-214ENST00000498529 SLC4A9Q96Q91 983 aa7.94□□□□□ -1.14
CSNK1E-214ENST00000498529 THSD7BQ9C0I4 1608 aa7.93□□□□□ -1.14
CSNK1E-214ENST00000498529 LOC102724428A0A0B4J2F2 783 aa7.93□□□□□ -1.14
CSNK1E-214ENST00000498529 GTPBP6O43824 516 aaPredicted RBP7.93□□□□□ -1.14
CSNK1E-214ENST00000498529 APLP1P51693 650 aa7.93□□□□□ -1.14
CSNK1E-214ENST00000498529 SIK1P57059 783 aa7.93□□□□□ -1.14
CSNK1E-214ENST00000498529 ZNF526Q8TF50 670 aaPredicted RBP7.93□□□□□ -1.14
CSNK1E-214ENST00000498529 ST20-MTHFSA0A0A6YYL1 179 aa7.92□□□□□ -1.14
CSNK1E-214ENST00000498529 TOMM70O94826 608 aa7.92□□□□□ -1.14
CSNK1E-214ENST00000498529 TATP17735 454 aaPredicted RBP7.92□□□□□ -1.14
CSNK1E-214ENST00000498529 KCNA3P22001 575 aa7.92□□□□□ -1.14
CSNK1E-214ENST00000498529 AMPHP49418 695 aa7.92□□□□□ -1.14
CSNK1E-214ENST00000498529 RAPGEF4Q8WZA2 1011 aa7.92□□□□□ -1.14
CSNK1E-214ENST00000498529 SMARCC1Q92922 1105 aaPredicted RBP7.92□□□□□ -1.14
CSNK1E-214ENST00000498529 GGNBP2Q9H3C7 697 aa7.92□□□□□ -1.14
CSNK1E-214ENST00000498529 NMRK2Q9NPI5 230 aa7.92□□□□□ -1.14
CSNK1E-214ENST00000498529 CNTNAP4Q9C0A0 1308 aa7.92□□□□□ -1.14
CSNK1E-214ENST00000498529 MPRIPQ6WCQ1 1025 aa7.91□□□□□ -1.14
CSNK1E-214ENST00000498529 SLC39A7Q92504 469 aa7.91□□□□□ -1.14
CSNK1E-214ENST00000498529 AK7Q96M32 723 aa7.91□□□□□ -1.14
CSNK1E-214ENST00000498529 CARD14Q9BXL6 1004 aa7.91□□□□□ -1.14
CSNK1E-214ENST00000498529 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.91□□□□□ -1.14
CSNK1E-214ENST00000498529 EMILIN1Q9Y6C2 1016 aa7.91□□□□□ -1.14
CSNK1E-214ENST00000498529 WASHC2AQ641Q2 1341 aa7.9□□□□□ -1.14
CSNK1E-214ENST00000498529 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.9□□□□□ -1.14
CSNK1E-214ENST00000498529 STK25O00506 426 aa7.9□□□□□ -1.14
CSNK1E-214ENST00000498529 PHF14O94880 888 aa7.9□□□□□ -1.14
CSNK1E-214ENST00000498529 MMP10P09238 476 aa7.9□□□□□ -1.14
CSNK1E-214ENST00000498529 C7P10643 843 aa7.9□□□□□ -1.14
CSNK1E-214ENST00000498529 GYS1P13807 737 aa7.9□□□□□ -1.14
CSNK1E-214ENST00000498529 PRKCSHP14314 528 aaPredicted RBP7.9□□□□□ -1.14
CSNK1E-214ENST00000498529 PHKG2P15735 406 aa7.9□□□□□ -1.14
CSNK1E-214ENST00000498529 ZNF467Q7Z7K2 595 aaPredicted RBP7.9□□□□□ -1.14
CSNK1E-214ENST00000498529 RBM46Q8TBY0 533 aaKnown RBP7.9□□□□□ -1.14
CSNK1E-214ENST00000498529 DCAF5Q96JK2 942 aa7.9□□□□□ -1.14
CSNK1E-214ENST00000498529 ZFP91Q96JP5 570 aaPredicted RBP7.9□□□□□ -1.14
CSNK1E-214ENST00000498529 ATG3Q9NT62 314 aa7.9□□□□□ -1.14
CSNK1E-214ENST00000498529 RYDENQ9NUL5 291 aaKnown RBP7.9□□□□□ -1.14
CSNK1E-214ENST00000498529 WWC3Q9ULE0 1092 aa7.9□□□□□ -1.14
CSNK1E-214ENST00000498529 ASAP1Q9ULH1 1129 aa7.9□□□□□ -1.14
CSNK1E-214ENST00000498529 SCN4AP35499 1836 aa7.89□□□□□ -1.15
CSNK1E-214ENST00000498529 GNPATO15228 680 aa7.89□□□□□ -1.15
CSNK1E-214ENST00000498529 PYGBP11216 843 aa7.89□□□□□ -1.15
CSNK1E-214ENST00000498529 HMGB2P26583 209 aaKnown RBP7.89□□□□□ -1.15
CSNK1E-214ENST00000498529 TGFB2P61812 414 aa7.89□□□□□ -1.15
CSNK1E-214ENST00000498529 KLRG1Q96E93 195 aa7.89□□□□□ -1.15
CSNK1E-214ENST00000498529 EYA1Q99502 592 aa7.89□□□□□ -1.15
CSNK1E-214ENST00000498529 SLX4Q8IY92 1834 aa7.88□□□□□ -1.15
CSNK1E-214ENST00000498529 PRELPP51888 382 aa7.88□□□□□ -1.15
CSNK1E-214ENST00000498529 HTRA3P83110 453 aa7.88□□□□□ -1.15
CSNK1E-214ENST00000498529 DDR1Q08345 913 aa7.88□□□□□ -1.15
CSNK1E-214ENST00000498529 NEUROD1Q13562 356 aa7.88□□□□□ -1.15
CSNK1E-214ENST00000498529 COL13A1Q5TAT6 717 aaPredicted RBP7.88□□□□□ -1.15
CSNK1E-214ENST00000498529 RC3H1Q5TC82 1133 aaKnown RBP7.88□□□□□ -1.15
CSNK1E-214ENST00000498529 USP42Q9H9J4 1324 aaKnown RBP7.87□□□□□ -1.15
CSNK1E-214ENST00000498529 POTEJP0CG39 1038 aa7.87□□□□□ -1.15
CSNK1E-214ENST00000498529 DPEP1P16444 411 aa7.87□□□□□ -1.15
CSNK1E-214ENST00000498529 ZC3H4Q9UPT8 1303 aaKnown RBP7.86□□□□□ -1.15
CSNK1E-214ENST00000498529 A0A0G2JLW4 131 aa7.86□□□□□ -1.15
CSNK1E-214ENST00000498529 FSTL1Q12841 308 aa7.86□□□□□ -1.15
CSNK1E-214ENST00000498529 ARHGEF1Q92888 912 aaKnown RBP7.86□□□□□ -1.15
CSNK1E-214ENST00000498529 TMOD3Q9NYL9 352 aa7.86□□□□□ -1.15
CSNK1E-214ENST00000498529 POLKQ9UBT6 870 aa7.86□□□□□ -1.15
CSNK1E-214ENST00000498529 CARMIL3Q8ND23 1372 aa7.85□□□□□ -1.15
CSNK1E-214ENST00000498529 RPS6KA4O75676 772 aa7.85□□□□□ -1.15
CSNK1E-214ENST00000498529 ATP6V1AP38606 617 aa7.85□□□□□ -1.15
CSNK1E-214ENST00000498529 C9orf131Q5VYM1 1079 aa7.85□□□□□ -1.15
CSNK1E-214ENST00000498529 PHF12Q96QT6 1004 aa7.85□□□□□ -1.15
CSNK1E-214ENST00000498529 TRPM7Q96QT4 1865 aa7.85□□□□□ -1.15
CSNK1E-214ENST00000498529 LAMB4A4D0S4 1761 aa7.84□□□□□ -1.15
CSNK1E-214ENST00000498529 POLRMTO00411 1230 aaKnown RBP7.84□□□□□ -1.15
CSNK1E-214ENST00000498529 PDAP1Q13442 181 aaKnown RBP7.84□□□□□ -1.15
CSNK1E-214ENST00000498529 EIF4A2Q14240 407 aaKnown RBP7.84□□□□□ -1.15
CSNK1E-214ENST00000498529 IFNL2Q8IZJ0 200 aa7.84□□□□□ -1.15
CSNK1E-214ENST00000498529 NLGN1Q8N2Q7 840 aa7.84□□□□□ -1.15
CSNK1E-214ENST00000498529 SPG7Q9UQ90 795 aa7.84□□□□□ -1.15
CSNK1E-214ENST00000498529 BCS1LQ9Y276 419 aa7.84□□□□□ -1.15
CSNK1E-214ENST00000498529 STK24Q9Y6E0 443 aa7.84□□□□□ -1.15
CSNK1E-214ENST00000498529 LTBP1Q14766 1721 aa7.83□□□□□ -1.16
CSNK1E-214ENST00000498529 POTECB2RU33 542 aa7.83□□□□□ -1.16
CSNK1E-214ENST00000498529 ERVV-2B6SEH9 535 aa7.83□□□□□ -1.16
CSNK1E-214ENST00000498529 TM4SF1P30408 202 aa7.83□□□□□ -1.16
CSNK1E-214ENST00000498529 TMF1P82094 1093 aa7.83□□□□□ -1.16
CSNK1E-214ENST00000498529 CCDC87Q9NVE4 849 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms