RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 BIN2Q9UBW5 565 aaPredicted RBP13.69□□□□□ -0.22
PBX1-211ENST00000498497 EVCP57679 992 aa13.68□□□□□ -0.22
PBX1-211ENST00000498497 UBE2HP62256 183 aa13.68□□□□□ -0.22
PBX1-211ENST00000498497 MMS22LQ6ZRQ5 1243 aa13.68□□□□□ -0.22
PBX1-211ENST00000498497 ARID4AP29374 1257 aaPredicted RBP13.68□□□□□ -0.22
PBX1-211ENST00000498497 CPLX2Q6PUV4 134 aaKnown RBP13.68□□□□□ -0.22
PBX1-211ENST00000498497 LRRC8AQ8IWT6 810 aa13.68□□□□□ -0.22
PBX1-211ENST00000498497 DACT1Q9NYF0 836 aa13.68□□□□□ -0.22
PBX1-211ENST00000498497 MRVI1Q9Y6F6 885 aa13.68□□□□□ -0.22
PBX1-211ENST00000498497 FYCO1Q9BQS8 1478 aa13.68□□□□□ -0.22
PBX1-211ENST00000498497 CAND2O75155 1236 aa13.68□□□□□ -0.22
PBX1-211ENST00000498497 FOSBP53539 338 aa13.68□□□□□ -0.22
PBX1-211ENST00000498497 MAP3K11Q16584 847 aa13.68□□□□□ -0.22
PBX1-211ENST00000498497 PLEKHM2Q8IWE5 1019 aa13.68□□□□□ -0.22
PBX1-211ENST00000498497 NUP62CLQ9H1M0 184 aa13.68□□□□□ -0.22
PBX1-211ENST00000498497 BICC1Q9H694 974 aaKnown RBP13.68□□□□□ -0.22
PBX1-211ENST00000498497 CCDC9Q9Y3X0 531 aaKnown RBP13.68□□□□□ -0.22
PBX1-211ENST00000498497 WDR33Q9C0J8 1336 aaKnown RBP13.67□□□□□ -0.22
PBX1-211ENST00000498497 IFIT2P09913 472 aaKnown RBP13.67□□□□□ -0.22
PBX1-211ENST00000498497 FAN1Q9Y2M0 1017 aa13.67□□□□□ -0.22
PBX1-211ENST00000498497 RALGAPBQ86X10 1494 aa13.67□□□□□ -0.22
PBX1-211ENST00000498497 TBC1D8O95759 1140 aa13.67□□□□□ -0.22
PBX1-211ENST00000498497 KAT2BQ92831 832 aa13.67□□□□□ -0.22
PBX1-211ENST00000498497 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.67□□□□□ -0.22
PBX1-211ENST00000498497 ERBINQ96RT1 1412 aa13.67□□□□□ -0.22
PBX1-211ENST00000498497 GOLGA8FQ08AF8 430 aa13.66□□□□□ -0.22
PBX1-211ENST00000498497 GOLGA8DPQ0D2H9 430 aa13.66□□□□□ -0.22
PBX1-211ENST00000498497 GBP6Q6ZN66 633 aa13.66□□□□□ -0.22
PBX1-211ENST00000498497 RUNDC1Q96C34 613 aa13.66□□□□□ -0.22
PBX1-211ENST00000498497 PICK1Q9NRD5 415 aa13.66□□□□□ -0.22
PBX1-211ENST00000498497 BECN2A8MW95 431 aa13.66□□□□□ -0.22
PBX1-211ENST00000498497 EIF2S2P20042 333 aaKnown RBP13.66□□□□□ -0.22
PBX1-211ENST00000498497 MORC1Q86VD1 984 aa13.66□□□□□ -0.22
PBX1-211ENST00000498497 SIRT2Q8IXJ6 389 aa13.66□□□□□ -0.22
PBX1-211ENST00000498497 RAD50Q92878 1312 aa13.66□□□□□ -0.22
PBX1-211ENST00000498497 KIAA1107Q9UPP5 1409 aa13.66□□□□□ -0.22
PBX1-211ENST00000498497 N4BP2L2Q92802 583 aaPredicted RBP13.66□□□□□ -0.22
PBX1-211ENST00000498497 ORC3Q9UBD5 711 aaPredicted RBP13.66□□□□□ -0.22
PBX1-211ENST00000498497 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.66□□□□□ -0.22
PBX1-211ENST00000498497 MAGI2Q86UL8 1455 aa13.66□□□□□ -0.22
PBX1-211ENST00000498497 GPRASP1Q5JY77 1395 aa13.65□□□□□ -0.22
PBX1-211ENST00000498497 MAP4K4O95819 1239 aaPredicted RBP13.65□□□□□ -0.22
PBX1-211ENST00000498497 TPM1P09493 284 aa13.65□□□□□ -0.22
PBX1-211ENST00000498497 GDAP1L1Q96MZ0 367 aa13.65□□□□□ -0.22
PBX1-211ENST00000498497 STAG3Q9UJ98 1225 aa13.65□□□□□ -0.22
PBX1-211ENST00000498497 G3BP2Q9UN86 482 aaKnown RBP13.65□□□□□ -0.22
PBX1-211ENST00000498497 LAMC3Q9Y6N6 1575 aa13.65□□□□□ -0.22
PBX1-211ENST00000498497 SMC2O95347 1197 aa13.65□□□□□ -0.22
PBX1-211ENST00000498497 BICD2Q8TD16 824 aa13.65□□□□□ -0.22
PBX1-211ENST00000498497 TTC22Q5TAA0 569 aa13.64□□□□□ -0.23
PBX1-211ENST00000498497 THUMPD2Q9BTF0 503 aaKnown RBP13.64□□□□□ -0.23
PBX1-211ENST00000498497 MED4Q9NPJ6 270 aa13.64□□□□□ -0.23
PBX1-211ENST00000498497 ERLIN2O94905 339 aa13.64□□□□□ -0.23
PBX1-211ENST00000498497 ZRSR1Q15695 479 aaKnown RBP13.64□□□□□ -0.23
PBX1-211ENST00000498497 MAP9Q49MG5 647 aa13.64□□□□□ -0.23
PBX1-211ENST00000498497 CD248Q9HCU0 757 aa13.64□□□□□ -0.23
PBX1-211ENST00000498497 ARFGAP3Q9NP61 516 aa13.64□□□□□ -0.23
PBX1-211ENST00000498497 SSBP05455 408 aaKnown RBP eCLIP13.64□□□□□ -0.23
PBX1-211ENST00000498497 SYT1P21579 422 aa13.64□□□□□ -0.23
PBX1-211ENST00000498497 NBPF6Q5VWK0 638 aa13.64□□□□□ -0.23
PBX1-211ENST00000498497 NBPF4Q96M43 638 aa13.64□□□□□ -0.23
PBX1-211ENST00000498497 CCDC171Q6TFL3 1326 aa13.64□□□□□ -0.23
PBX1-211ENST00000498497 ZMYM3Q14202 1370 aa13.63□□□□□ -0.23
PBX1-211ENST00000498497 PPFIA3O75145 1194 aa13.63□□□□□ -0.23
PBX1-211ENST00000498497 CREBRFQ8IUR6 639 aa13.63□□□□□ -0.23
PBX1-211ENST00000498497 THOC1Q96FV9 657 aaKnown RBP13.63□□□□□ -0.23
PBX1-211ENST00000498497 FUCA2Q9BTY2 467 aa13.63□□□□□ -0.23
PBX1-211ENST00000498497 EFCAB5A4FU69 1503 aa13.63□□□□□ -0.23
PBX1-211ENST00000498497 EPRSP07814 1512 aaKnown RBP13.63□□□□□ -0.23
PBX1-211ENST00000498497 ZRANB2O95218 330 aaKnown RBP eCLIP13.63□□□□□ -0.23
PBX1-211ENST00000498497 TADA2BQ86TJ2 420 aa13.63□□□□□ -0.23
PBX1-211ENST00000498497 TICAM2Q86XR7 235 aa13.63□□□□□ -0.23
PBX1-211ENST00000498497 CEP57Q86XR8 500 aa13.63□□□□□ -0.23
PBX1-211ENST00000498497 CCDC83Q8IWF9 413 aa13.63□□□□□ -0.23
PBX1-211ENST00000498497 POLD4Q9HCU8 107 aa13.63□□□□□ -0.23
PBX1-211ENST00000498497 STX6O43752 255 aa13.62□□□□□ -0.23
PBX1-211ENST00000498497 MTHFSP49914 203 aa13.62□□□□□ -0.23
PBX1-211ENST00000498497 NYAP1Q6ZVC0 841 aa13.62□□□□□ -0.23
PBX1-211ENST00000498497 SMC3Q9UQE7 1217 aa13.62□□□□□ -0.23
PBX1-211ENST00000498497 MBD5Q9P267 1494 aa13.62□□□□□ -0.23
PBX1-211ENST00000498497 ERC2O15083 957 aa13.62□□□□□ -0.23
PBX1-211ENST00000498497 ACTN3Q08043 901 aaPredicted RBP13.62□□□□□ -0.23
PBX1-211ENST00000498497 NUTM2GQ5VZR2 741 aa13.62□□□□□ -0.23
PBX1-211ENST00000498497 CC2D1AQ6P1N0 951 aaPredicted RBP13.62□□□□□ -0.23
PBX1-211ENST00000498497 KIF14Q15058 1648 aa13.62□□□□□ -0.23
PBX1-211ENST00000498497 ZSCAN22P10073 491 aaPredicted RBP13.62□□□□□ -0.23
PBX1-211ENST00000498497 HNRNPH1P31943 449 aaKnown RBP13.62□□□□□ -0.23
PBX1-211ENST00000498497 HINFPQ9BQA5 517 aa13.62□□□□□ -0.23
PBX1-211ENST00000498497 KIAA0586Q9BVV6 1533 aa13.61□□□□□ -0.23
PBX1-211ENST00000498497 PZPP20742 1482 aa13.61□□□□□ -0.23
PBX1-211ENST00000498497 AP1G2O75843 785 aa13.61□□□□□ -0.23
PBX1-211ENST00000498497 IVLP07476 585 aa13.61□□□□□ -0.23
PBX1-211ENST00000498497 SLFNL1Q499Z3 407 aa13.61□□□□□ -0.23
PBX1-211ENST00000498497 PPIP5K1Q6PFW1 1433 aa13.61□□□□□ -0.23
PBX1-211ENST00000498497 PPP1R12AO14974 1030 aaPredicted RBP13.61□□□□□ -0.23
PBX1-211ENST00000498497 KIF1CO43896 1103 aaKnown RBP13.61□□□□□ -0.23
PBX1-211ENST00000498497 PUF60Q9UHX1 559 aaKnown RBP13.61□□□□□ -0.23
PBX1-211ENST00000498497 CTTNBP2Q8WZ74 1663 aa13.61□□□□□ -0.23
PBX1-211ENST00000498497 CORO7P57737 925 aa13.6□□□□□ -0.23
PBX1-211ENST00000498497 SNX1Q13596 522 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms