RNA–Protein interactions for RNA: ENST00000498434.1

RTCB-206, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 4

Gene RTCB, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-206ENST00000498434 MBIPQ9NS73 344 aa10.62□□□□□ -0.71
RTCB-206ENST00000498434 VPS9D1Q9Y2B5 631 aa10.62□□□□□ -0.71
RTCB-206ENST00000498434 STK25O00506 426 aa10.61□□□□□ -0.71
RTCB-206ENST00000498434 KCNK17Q96T54 332 aa10.61□□□□□ -0.71
RTCB-206ENST00000498434 LTN1O94822 1766 aa10.61□□□□□ -0.71
RTCB-206ENST00000498434 MAP3K5Q99683 1374 aa10.61□□□□□ -0.71
RTCB-206ENST00000498434 TRPM3Q9HCF6 1732 aaPredicted RBP10.61□□□□□ -0.71
RTCB-206ENST00000498434 MARF1Q9Y4F3 1742 aaKnown RBP10.61□□□□□ -0.71
RTCB-206ENST00000498434 DLG5Q8TDM6 1919 aa10.6□□□□□ -0.71
RTCB-206ENST00000498434 TNS3Q68CZ2 1445 aa10.6□□□□□ -0.71
RTCB-206ENST00000498434 VAMP4O75379 141 aa10.6□□□□□ -0.71
RTCB-206ENST00000498434 MTHFSDQ2M296 383 aaKnown RBP10.6□□□□□ -0.71
RTCB-206ENST00000498434 COG6Q9Y2V7 657 aa10.6□□□□□ -0.71
RTCB-206ENST00000498434 C1orf141Q5JVX7 400 aa10.59□□□□□ -0.71
RTCB-206ENST00000498434 THSD4Q6ZMP0 1018 aa10.59□□□□□ -0.71
RTCB-206ENST00000498434 PANK1Q8TE04 598 aa10.59□□□□□ -0.71
RTCB-206ENST00000498434 LTV1Q96GA3 475 aaPredicted RBP10.59□□□□□ -0.71
RTCB-206ENST00000498434 BCL2L13Q9BXK5 485 aa10.59□□□□□ -0.71
RTCB-206ENST00000498434 TSPYL4Q9UJ04 414 aa10.59□□□□□ -0.71
RTCB-206ENST00000498434 NOB1Q9ULX3 412 aaKnown RBP10.59□□□□□ -0.71
RTCB-206ENST00000498434 PTPRCP08575 1304 aa10.58□□□□□ -0.71
RTCB-206ENST00000498434 KDM2BQ8NHM5 1336 aa10.58□□□□□ -0.71
RTCB-206ENST00000498434 NCAPD2Q15021 1401 aa10.58□□□□□ -0.72
RTCB-206ENST00000498434 LTBP4Q8N2S1 1624 aa10.58□□□□□ -0.72
RTCB-206ENST00000498434 ALS2Q96Q42 1657 aa10.58□□□□□ -0.72
RTCB-206ENST00000498434 ZBTB7CA1YPR0 619 aa10.58□□□□□ -0.72
RTCB-206ENST00000498434 TRIM27P14373 513 aa10.58□□□□□ -0.72
RTCB-206ENST00000498434 TAF7Q15545 349 aaPredicted RBP10.58□□□□□ -0.72
RTCB-206ENST00000498434 AKAP4Q5JQC9 854 aa10.58□□□□□ -0.72
RTCB-206ENST00000498434 ITPRIPQ8IWB1 547 aa10.58□□□□□ -0.72
RTCB-206ENST00000498434 ANKRD24Q8TF21 1146 aa10.58□□□□□ -0.72
RTCB-206ENST00000498434 STK31Q9BXU1 1019 aa10.58□□□□□ -0.72
RTCB-206ENST00000498434 SLAIN2Q9P270 581 aa10.58□□□□□ -0.72
RTCB-206ENST00000498434 RBM19Q9Y4C8 960 aaKnown RBP10.58□□□□□ -0.72
RTCB-206ENST00000498434 OVOS2A0A0G2JMS6 1433 aa10.58□□□□□ -0.72
RTCB-206ENST00000498434 SPATA31A3Q5VYP0 1347 aa10.58□□□□□ -0.72
RTCB-206ENST00000498434 MED1Q15648 1581 aaPredicted RBP10.57□□□□□ -0.72
RTCB-206ENST00000498434 FOXK1P85037 733 aa10.57□□□□□ -0.72
RTCB-206ENST00000498434 MCM10Q7L590 875 aa10.57□□□□□ -0.72
RTCB-206ENST00000498434 MRPL50Q8N5N7 158 aaKnown RBP10.57□□□□□ -0.72
RTCB-206ENST00000498434 THUMPD2Q9BTF0 503 aaKnown RBP10.57□□□□□ -0.72
RTCB-206ENST00000498434 SLC4A5Q9BY07 1137 aa10.57□□□□□ -0.72
RTCB-206ENST00000498434 CRB1P82279 1406 aa10.57□□□□□ -0.72
RTCB-206ENST00000498434 STRCP1A6NGW2 1772 aa10.57□□□□□ -0.72
RTCB-206ENST00000498434 FAM83GA6ND36 823 aa10.56□□□□□ -0.72
RTCB-206ENST00000498434 HOXB7P09629 217 aa10.56□□□□□ -0.72
RTCB-206ENST00000498434 XPCQ01831 940 aaPredicted RBP10.56□□□□□ -0.72
RTCB-206ENST00000498434 CCDC30Q5VVM6 783 aa10.56□□□□□ -0.72
RTCB-206ENST00000498434 RAPGEF4Q8WZA2 1011 aa10.56□□□□□ -0.72
RTCB-206ENST00000498434 CPDO75976 1380 aa10.55□□□□□ -0.72
RTCB-206ENST00000498434 FAM208AQ9UK61 1670 aaKnown RBP10.55□□□□□ -0.72
RTCB-206ENST00000498434 PIP4K2BP78356 416 aa10.55□□□□□ -0.72
RTCB-206ENST00000498434 TEFQ10587 303 aa10.55□□□□□ -0.72
RTCB-206ENST00000498434 HDAC1Q13547 482 aaPredicted RBP10.55□□□□□ -0.72
RTCB-206ENST00000498434 DCTN1Q14203 1278 aa10.55□□□□□ -0.72
RTCB-206ENST00000498434 NBPF6Q5VWK0 638 aa10.55□□□□□ -0.72
RTCB-206ENST00000498434 NBPF4Q96M43 638 aa10.55□□□□□ -0.72
RTCB-206ENST00000498434 SPG7Q9UQ90 795 aa10.55□□□□□ -0.72
RTCB-206ENST00000498434 BHMG1C9JSJ3 638 aaPredicted RBP10.54□□□□□ -0.72
RTCB-206ENST00000498434 PPP1R37O75864 691 aa10.54□□□□□ -0.72
RTCB-206ENST00000498434 HSP90AB1P08238 724 aaKnown RBP10.54□□□□□ -0.72
RTCB-206ENST00000498434 CSB-PGBD3P0DP91 1061 aa10.54□□□□□ -0.72
RTCB-206ENST00000498434 TATP17735 454 aaPredicted RBP10.54□□□□□ -0.72
RTCB-206ENST00000498434 HSPA1LP34931 641 aa10.54□□□□□ -0.72
RTCB-206ENST00000498434 ZNF530Q6P9A1 599 aaPredicted RBP10.54□□□□□ -0.72
RTCB-206ENST00000498434 BRINP3Q76B58 766 aa10.54□□□□□ -0.72
RTCB-206ENST00000498434 PLPP6Q8IY26 295 aa10.54□□□□□ -0.72
RTCB-206ENST00000498434 C8orf58Q8NAV2 365 aa10.54□□□□□ -0.72
RTCB-206ENST00000498434 PXDNQ92626 1479 aa10.54□□□□□ -0.72
RTCB-206ENST00000498434 ZNF335Q9H4Z2 1342 aaPredicted RBP10.54□□□□□ -0.72
RTCB-206ENST00000498434 EIF5BO60841 1220 aaKnown RBP10.53□□□□□ -0.72
RTCB-206ENST00000498434 RLBP1P12271 317 aa10.53□□□□□ -0.72
RTCB-206ENST00000498434 ANP32AP39687 249 aaKnown RBP10.53□□□□□ -0.72
RTCB-206ENST00000498434 TMEM57Q8N5G2 664 aa10.53□□□□□ -0.72
RTCB-206ENST00000498434 TSPYL6Q8N831 410 aa10.53□□□□□ -0.72
RTCB-206ENST00000498434 ABCC4O15439 1325 aa10.53□□□□□ -0.72
RTCB-206ENST00000498434 SOS2Q07890 1332 aaPredicted RBP10.53□□□□□ -0.72
RTCB-206ENST00000498434 CEMIPQ8WUJ3 1361 aa10.52□□□□□ -0.72
RTCB-206ENST00000498434 LRRC37A3O60309 1634 aa10.52□□□□□ -0.73
RTCB-206ENST00000498434 ELL2O00472 640 aaPredicted RBP10.52□□□□□ -0.73
RTCB-206ENST00000498434 TBC1D12O60347 775 aa10.52□□□□□ -0.73
RTCB-206ENST00000498434 ZC3H6P61129 1189 aaKnown RBP10.52□□□□□ -0.73
RTCB-206ENST00000498434 ZBTB40Q9NUA8 1239 aa10.52□□□□□ -0.73
RTCB-206ENST00000498434 NLRP2Q9NX02 1062 aa10.52□□□□□ -0.73
RTCB-206ENST00000498434 CAMTA1Q9Y6Y1 1673 aa10.51□□□□□ -0.73
RTCB-206ENST00000498434 CCT4P50991 539 aaKnown RBP10.51□□□□□ -0.73
RTCB-206ENST00000498434 INTS3Q68E01 1043 aaKnown RBP10.51□□□□□ -0.73
RTCB-206ENST00000498434 GCC1Q96CN9 775 aa10.51□□□□□ -0.73
RTCB-206ENST00000498434 HDAC5Q9UQL6 1122 aa10.51□□□□□ -0.73
RTCB-206ENST00000498434 CACNA1FO60840 1977 aa10.5□□□□□ -0.73
RTCB-206ENST00000498434 XIRP1Q702N8 1843 aaKnown RBP10.5□□□□□ -0.73
RTCB-206ENST00000498434 PDE4AP27815 886 aa10.5□□□□□ -0.73
RTCB-206ENST00000498434 FAM161AQ3B820 660 aa10.5□□□□□ -0.73
RTCB-206ENST00000498434 USHBP1Q8N6Y0 703 aa10.5□□□□□ -0.73
RTCB-206ENST00000498434 IL17REQ8NFR9 667 aa10.5□□□□□ -0.73
RTCB-206ENST00000498434 BCL2L12Q9HB09 334 aa10.5□□□□□ -0.73
RTCB-206ENST00000498434 LMO7Q8WWI1 1683 aa10.5□□□□□ -0.73
RTCB-206ENST00000498434 BTBD11A6QL63 1104 aa10.49□□□□□ -0.73
RTCB-206ENST00000498434 IFNL2Q8IZJ0 200 aa10.49□□□□□ -0.73
RTCB-206ENST00000498434 LRRC59Q96AG4 307 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms