RNA–Protein interactions for RNA: ENST00000498160.5

CTDSP1-215, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-215ENST00000498160 EN1Q05925 392 aaPredicted RBP22.57■■□□□ 1.2
CTDSP1-215ENST00000498160 CACNA1FO60840 1977 aa22.56■■□□□ 1.2
CTDSP1-215ENST00000498160 KRT24Q2M2I5 525 aa22.56■■□□□ 1.2
CTDSP1-215ENST00000498160 TSPYL6Q8N831 410 aa22.56■■□□□ 1.2
CTDSP1-215ENST00000498160 DBF4Q9UBU7 674 aaPredicted RBP22.56■■□□□ 1.2
CTDSP1-215ENST00000498160 USP16Q9Y5T5 823 aa22.56■■□□□ 1.2
CTDSP1-215ENST00000498160 C4BP0C0L5 1744 aa22.55■■□□□ 1.2
CTDSP1-215ENST00000498160 ELL2O00472 640 aaPredicted RBP22.55■■□□□ 1.2
CTDSP1-215ENST00000498160 ITPK1Q13572 414 aa22.55■■□□□ 1.2
CTDSP1-215ENST00000498160 NPM2Q86SE8 214 aaKnown RBP22.55■■□□□ 1.2
CTDSP1-215ENST00000498160 CCDC87Q9NVE4 849 aa22.55■■□□□ 1.2
CTDSP1-215ENST00000498160 EIF2S2P20042 333 aaKnown RBP22.54■■□□□ 1.2
CTDSP1-215ENST00000498160 CRKLP46109 303 aaKnown RBP22.54■■□□□ 1.2
CTDSP1-215ENST00000498160 EZH2Q15910 746 aaKnown RBP22.54■■□□□ 1.2
CTDSP1-215ENST00000498160 PROM2Q8N271 834 aa22.53■■□□□ 1.2
CTDSP1-215ENST00000498160 LINC00116Q8NCU8 138 aa22.53■■□□□ 1.2
CTDSP1-215ENST00000498160 AK7Q96M32 723 aa22.53■■□□□ 1.2
CTDSP1-215ENST00000498160 DDX21Q9NR30 783 aaKnown RBP eCLIP22.53■■□□□ 1.2
CTDSP1-215ENST00000498160 LRRC4BQ9NT99 713 aa22.53■■□□□ 1.2
CTDSP1-215ENST00000498160 HYPKQ9NX55 129 aa22.53■■□□□ 1.2
CTDSP1-215ENST00000498160 IL6STP40189 918 aaPredicted RBP22.52■■□□□ 1.2
CTDSP1-215ENST00000498160 DEFB132Q7Z7B7 95 aa22.52■■□□□ 1.2
CTDSP1-215ENST00000498160 PRAMEF22A3QJZ6 481 aa22.51■■□□□ 1.19
CTDSP1-215ENST00000498160 CENPBP07199 599 aaPredicted RBP22.51■■□□□ 1.19
CTDSP1-215ENST00000498160 NBPF14Q5TI25 921 aa22.51■■□□□ 1.19
CTDSP1-215ENST00000498160 NUP188Q5SRE5 1749 aa22.51■■□□□ 1.19
CTDSP1-215ENST00000498160 A0A087WZG4 1122 aa22.5■■□□□ 1.19
CTDSP1-215ENST00000498160 ADRA2BP18089 450 aa22.5■■□□□ 1.19
CTDSP1-215ENST00000498160 BRPF1P55201 1214 aaPredicted RBP22.5■■□□□ 1.19
CTDSP1-215ENST00000498160 FLAD1Q8NFF5 587 aa22.5■■□□□ 1.19
CTDSP1-215ENST00000498160 RPS6KA4O75676 772 aa22.49■■□□□ 1.19
CTDSP1-215ENST00000498160 STK32BQ9NY57 414 aa22.49■■□□□ 1.19
CTDSP1-215ENST00000498160 RTCBQ9Y3I0 505 aaKnown RBP22.49■■□□□ 1.19
CTDSP1-215ENST00000498160 KIF16BQ96L93 1317 aa22.49■■□□□ 1.19
CTDSP1-215ENST00000498160 RARSP54136 660 aaKnown RBP22.48■■□□□ 1.19
CTDSP1-215ENST00000498160 INTS5Q6P9B9 1019 aaKnown RBP22.48■■□□□ 1.19
CTDSP1-215ENST00000498160 CHPF2Q9P2E5 772 aa22.48■■□□□ 1.19
CTDSP1-215ENST00000498160 A1BGP04217 495 aa22.47■■□□□ 1.19
CTDSP1-215ENST00000498160 SSFA2P28290 1259 aa22.47■■□□□ 1.19
CTDSP1-215ENST00000498160 SMC4Q9NTJ3 1288 aa22.47■■□□□ 1.19
CTDSP1-215ENST00000498160 RCAN3Q9UKA8 241 aa22.47■■□□□ 1.19
CTDSP1-215ENST00000498160 ZBTB1Q9Y2K1 713 aa22.47■■□□□ 1.19
CTDSP1-215ENST00000498160 RGL2O15211 777 aa22.46■■□□□ 1.19
CTDSP1-215ENST00000498160 GNPATO15228 680 aa22.46■■□□□ 1.19
CTDSP1-215ENST00000498160 SLC4A2P04920 1241 aa22.46■■□□□ 1.19
CTDSP1-215ENST00000498160 KCNQ4P56696 695 aa22.46■■□□□ 1.19
CTDSP1-215ENST00000498160 QSER1Q2KHR3 1735 aa22.45■■□□□ 1.19
CTDSP1-215ENST00000498160 MYH14Q7Z406 1995 aaKnown RBP22.45■■□□□ 1.18
CTDSP1-215ENST00000498160 DDX58O95786 925 aaKnown RBP22.45■■□□□ 1.18
CTDSP1-215ENST00000498160 CANXP27824 592 aaKnown RBP22.45■■□□□ 1.18
CTDSP1-215ENST00000498160 EIF5P55010 431 aaKnown RBP22.45■■□□□ 1.18
CTDSP1-215ENST00000498160 PDIA6Q15084 440 aa22.45■■□□□ 1.18
CTDSP1-215ENST00000498160 NECTIN2Q92692 538 aa22.45■■□□□ 1.18
CTDSP1-215ENST00000498160 AKT1S1Q96B36 256 aa22.45■■□□□ 1.18
CTDSP1-215ENST00000498160 NBPF26B4DH59 902 aa22.44■■□□□ 1.18
CTDSP1-215ENST00000498160 PTPRCP08575 1304 aa22.44■■□□□ 1.18
CTDSP1-215ENST00000498160 COL15A1P39059 1388 aa22.44■■□□□ 1.18
CTDSP1-215ENST00000498160 SLC15A2Q16348 729 aa22.44■■□□□ 1.18
CTDSP1-215ENST00000498160 NBPF10Q6P3W6 841 aaKnown RBP22.44■■□□□ 1.18
CTDSP1-215ENST00000498160 NBPF15Q8N660 670 aa22.44■■□□□ 1.18
CTDSP1-215ENST00000498160 SSH1Q8WYL5 1049 aa22.44■■□□□ 1.18
CTDSP1-215ENST00000498160 TFCP2L1Q9NZI6 479 aa22.44■■□□□ 1.18
CTDSP1-215ENST00000498160 UBR3Q6ZT12 1888 aa22.43■■□□□ 1.18
CTDSP1-215ENST00000498160 IPO8O15397 1037 aaKnown RBP22.43■■□□□ 1.18
CTDSP1-215ENST00000498160 MYL6BP14649 208 aa22.43■■□□□ 1.18
CTDSP1-215ENST00000498160 MRPL50Q8N5N7 158 aaKnown RBP22.43■■□□□ 1.18
CTDSP1-215ENST00000498160 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.43■■□□□ 1.18
CTDSP1-215ENST00000498160 TRAPPC3LQ5T215 181 aa22.42■■□□□ 1.18
CTDSP1-215ENST00000498160 KIF6Q6ZMV9 814 aa22.42■■□□□ 1.18
CTDSP1-215ENST00000498160 ARHGAP45Q92619 1136 aa22.41■■□□□ 1.18
CTDSP1-215ENST00000498160 SOCS7O14512 581 aa22.4■■□□□ 1.18
CTDSP1-215ENST00000498160 FLIIQ13045 1269 aa22.4■■□□□ 1.18
CTDSP1-215ENST00000498160 LRP10Q7Z4F1 713 aa22.4■■□□□ 1.18
CTDSP1-215ENST00000498160 ERVV-1B6SEH8 477 aa22.39■■□□□ 1.17
CTDSP1-215ENST00000498160 MS4A1P11836 297 aa22.39■■□□□ 1.17
CTDSP1-215ENST00000498160 ZNF827Q17R98 1081 aa22.39■■□□□ 1.17
CTDSP1-215ENST00000498160 ZNF330Q9Y3S2 320 aaPredicted RBP22.39■■□□□ 1.17
CTDSP1-215ENST00000498160 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.38■■□□□ 1.17
CTDSP1-215ENST00000498160 RFC4P35249 363 aa22.38■■□□□ 1.17
CTDSP1-215ENST00000498160 PROSER3Q2NL68 480 aa22.38■■□□□ 1.17
CTDSP1-215ENST00000498160 COPS6Q7L5N1 327 aa22.38■■□□□ 1.17
CTDSP1-215ENST00000498160 DZIP3Q86Y13 1208 aaKnown RBP22.38■■□□□ 1.17
CTDSP1-215ENST00000498160 XAGE3Q8WTP9 111 aa22.38■■□□□ 1.17
CTDSP1-215ENST00000498160 API5Q9BZZ5 524 aaKnown RBP22.38■■□□□ 1.17
CTDSP1-215ENST00000498160 ZNF652Q9Y2D9 606 aa22.38■■□□□ 1.17
CTDSP1-215ENST00000498160 ZPR1O75312 459 aa22.37■■□□□ 1.17
CTDSP1-215ENST00000498160 FKBP5Q13451 457 aaPredicted RBP22.37■■□□□ 1.17
CTDSP1-215ENST00000498160 HSP90AB3PQ58FF7 597 aa22.37■■□□□ 1.17
CTDSP1-215ENST00000498160 PLBD2Q8NHP8 589 aa22.37■■□□□ 1.17
CTDSP1-215ENST00000498160 NARFQ9UHQ1 456 aa22.37■■□□□ 1.17
CTDSP1-215ENST00000498160 MAP3K15Q6ZN16 1313 aa22.36■■□□□ 1.17
CTDSP1-215ENST00000498160 TCERG1O14776 1098 aaKnown RBP22.36■■□□□ 1.17
CTDSP1-215ENST00000498160 ANXA1P04083 346 aa22.36■■□□□ 1.17
CTDSP1-215ENST00000498160 CLEC4GQ6UXB4 293 aa22.36■■□□□ 1.17
CTDSP1-215ENST00000498160 ANKRD13DQ6ZTN6 518 aa22.36■■□□□ 1.17
CTDSP1-215ENST00000498160 BCL2L13Q9BXK5 485 aa22.36■■□□□ 1.17
CTDSP1-215ENST00000498160 PHAXQ9H814 394 aaKnown RBP22.36■■□□□ 1.17
CTDSP1-215ENST00000498160 ANO8Q9HCE9 1232 aaPredicted RBP22.36■■□□□ 1.17
CTDSP1-215ENST00000498160 PIP4K2AP48426 406 aaPredicted RBP22.35■■□□□ 1.17
CTDSP1-215ENST00000498160 ZKSCAN2Q63HK3 967 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms