RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 MAP3K5Q99683 1374 aa9.72□□□□□ -0.85
HLA-DMB-262ENST00000498020 FER1L4A9Z1Z3 1794 aa9.72□□□□□ -0.85
HLA-DMB-262ENST00000498020 IGSF1Q8N6C5 1336 aa9.72□□□□□ -0.85
HLA-DMB-262ENST00000498020 SURF6O75683 361 aaKnown RBP9.72□□□□□ -0.85
HLA-DMB-262ENST00000498020 ANKRD24Q8TF21 1146 aa9.72□□□□□ -0.85
HLA-DMB-262ENST00000498020 USP31Q70CQ4 1352 aa9.72□□□□□ -0.85
HLA-DMB-262ENST00000498020 PTCH1Q13635 1447 aa9.71□□□□□ -0.85
HLA-DMB-262ENST00000498020 MYCNP04198 464 aaPredicted RBP9.71□□□□□ -0.85
HLA-DMB-262ENST00000498020 FOXD4L1Q9NU39 408 aa9.71□□□□□ -0.85
HLA-DMB-262ENST00000498020 MSL1Q68DK7 614 aa9.71□□□□□ -0.86
HLA-DMB-262ENST00000498020 CEP85Q6P2H3 762 aa9.71□□□□□ -0.86
HLA-DMB-262ENST00000498020 TBC1D9Q6ZT07 1266 aa9.71□□□□□ -0.86
HLA-DMB-262ENST00000498020 CPS1P31327 1500 aa9.71□□□□□ -0.86
HLA-DMB-262ENST00000498020 AFF2P51816 1311 aa9.71□□□□□ -0.86
HLA-DMB-262ENST00000498020 CIZ1Q9ULV3 898 aaPredicted RBP9.7□□□□□ -0.86
HLA-DMB-262ENST00000498020 ERC2O15083 957 aa9.7□□□□□ -0.86
HLA-DMB-262ENST00000498020 WDHD1O75717 1129 aaPredicted RBP9.7□□□□□ -0.86
HLA-DMB-262ENST00000498020 GCP02774 474 aa9.7□□□□□ -0.86
HLA-DMB-262ENST00000498020 ATP6V1AP38606 617 aa9.7□□□□□ -0.86
HLA-DMB-262ENST00000498020 KRT27Q7Z3Y8 459 aa9.7□□□□□ -0.86
HLA-DMB-262ENST00000498020 EXOC6BQ9Y2D4 811 aa9.7□□□□□ -0.86
HLA-DMB-262ENST00000498020 ADGRB2O60241 1585 aa9.7□□□□□ -0.86
HLA-DMB-262ENST00000498020 AKAP4Q5JQC9 854 aa9.7□□□□□ -0.86
HLA-DMB-262ENST00000498020 TTC22Q5TAA0 569 aa9.7□□□□□ -0.86
HLA-DMB-262ENST00000498020 BCS1LQ9Y276 419 aa9.7□□□□□ -0.86
HLA-DMB-262ENST00000498020 OVOS2A0A0J9YW53 1432 aa9.7□□□□□ -0.86
HLA-DMB-262ENST00000498020 OVOS2Q6IE36 1432 aa9.7□□□□□ -0.86
HLA-DMB-262ENST00000498020 VPS53Q5VIR6 699 aa9.7□□□□□ -0.86
HLA-DMB-262ENST00000498020 MYO5BQ9ULV0 1848 aa9.69□□□□□ -0.86
HLA-DMB-262ENST00000498020 K7ELQ4 463 aaPredicted RBP9.69□□□□□ -0.86
HLA-DMB-262ENST00000498020 SMARCA5O60264 1052 aaPredicted RBP9.69□□□□□ -0.86
HLA-DMB-262ENST00000498020 SKOR2Q2VWA4 1001 aaPredicted RBP9.69□□□□□ -0.86
HLA-DMB-262ENST00000498020 ZNF408Q9H9D4 720 aa9.69□□□□□ -0.86
HLA-DMB-262ENST00000498020 ANO2Q9NQ90 1003 aa9.69□□□□□ -0.86
HLA-DMB-262ENST00000498020 ZCRB1Q8TBF4 217 aaKnown RBP9.69□□□□□ -0.86
HLA-DMB-262ENST00000498020 GZF1Q9H116 711 aaPredicted RBP9.69□□□□□ -0.86
HLA-DMB-262ENST00000498020 DBF4Q9UBU7 674 aaPredicted RBP9.69□□□□□ -0.86
HLA-DMB-262ENST00000498020 C6orf229H3BNL8 230 aa9.69□□□□□ -0.86
HLA-DMB-262ENST00000498020 RUFY2Q8WXA3 655 aa9.69□□□□□ -0.86
HLA-DMB-262ENST00000498020 DNAAF4Q8WXU2 420 aa9.69□□□□□ -0.86
HLA-DMB-262ENST00000498020 SHPRHQ149N8 1683 aa9.69□□□□□ -0.86
HLA-DMB-262ENST00000498020 GOLGA6L3A6NEY3 463 aa9.68□□□□□ -0.86
HLA-DMB-262ENST00000498020 RAB11FIP3O75154 756 aa9.68□□□□□ -0.86
HLA-DMB-262ENST00000498020 NUCB2P80303 420 aa9.68□□□□□ -0.86
HLA-DMB-262ENST00000498020 G2E3Q7L622 706 aa9.68□□□□□ -0.86
HLA-DMB-262ENST00000498020 SEPT12Q8IYM1 358 aa9.68□□□□□ -0.86
HLA-DMB-262ENST00000498020 CLASRPQ8N2M8 674 aaKnown RBP9.68□□□□□ -0.86
HLA-DMB-262ENST00000498020 IFIT2P09913 472 aaKnown RBP9.68□□□□□ -0.86
HLA-DMB-262ENST00000498020 G3BP1Q13283 466 aaKnown RBP eCLIP9.68□□□□□ -0.86
HLA-DMB-262ENST00000498020 PLEKHM2Q8IWE5 1019 aa9.68□□□□□ -0.86
HLA-DMB-262ENST00000498020 CCNL1Q9UK58 526 aaPredicted RBP9.68□□□□□ -0.86
HLA-DMB-262ENST00000498020 LRRFIP2Q9Y608 721 aaKnown RBP9.68□□□□□ -0.86
HLA-DMB-262ENST00000498020 SRGAP3O43295 1099 aa9.68□□□□□ -0.86
HLA-DMB-262ENST00000498020 GNL2Q13823 731 aaKnown RBP9.68□□□□□ -0.86
HLA-DMB-262ENST00000498020 RTL1A6NKG5 1358 aa9.68□□□□□ -0.86
HLA-DMB-262ENST00000498020 PTPRUQ92729 1446 aa9.68□□□□□ -0.86
HLA-DMB-262ENST00000498020 HOXB7P09629 217 aa9.68□□□□□ -0.86
HLA-DMB-262ENST00000498020 CHAF1AQ13111 956 aaPredicted RBP9.68□□□□□ -0.86
HLA-DMB-262ENST00000498020 ERC1Q8IUD2 1116 aa9.68□□□□□ -0.86
HLA-DMB-262ENST00000498020 NAP1L5Q96NT1 182 aaPredicted RBP9.68□□□□□ -0.86
HLA-DMB-262ENST00000498020 PARP3Q9Y6F1 533 aa9.68□□□□□ -0.86
HLA-DMB-262ENST00000498020 ATP8B2P98198 1209 aa9.67□□□□□ -0.86
HLA-DMB-262ENST00000498020 ZSCAN29Q8IWY8 852 aaPredicted RBP9.67□□□□□ -0.86
HLA-DMB-262ENST00000498020 RPGRQ92834 1020 aaKnown RBP9.67□□□□□ -0.86
HLA-DMB-262ENST00000498020 SNX21Q969T3 373 aa9.67□□□□□ -0.86
HLA-DMB-262ENST00000498020 ZNF652Q9Y2D9 606 aa9.67□□□□□ -0.86
HLA-DMB-262ENST00000498020 IL2RBP14784 551 aa9.67□□□□□ -0.86
HLA-DMB-262ENST00000498020 MX1P20591 662 aa9.67□□□□□ -0.86
HLA-DMB-262ENST00000498020 DIAPH3Q9NSV4 1193 aa9.67□□□□□ -0.86
HLA-DMB-262ENST00000498020 GPTP24298 496 aa9.67□□□□□ -0.86
HLA-DMB-262ENST00000498020 RBM25P49756 843 aaKnown RBP9.67□□□□□ -0.86
HLA-DMB-262ENST00000498020 RBM6P78332 1123 aaKnown RBP9.67□□□□□ -0.86
HLA-DMB-262ENST00000498020 IL17REQ8NFR9 667 aa9.67□□□□□ -0.86
HLA-DMB-262ENST00000498020 KIF1BPQ96EK5 621 aa9.67□□□□□ -0.86
HLA-DMB-262ENST00000498020 MCM4P33991 863 aa9.66□□□□□ -0.86
HLA-DMB-262ENST00000498020 MCM2P49736 904 aa9.66□□□□□ -0.86
HLA-DMB-262ENST00000498020 CNTROBQ8N137 903 aa9.66□□□□□ -0.86
HLA-DMB-262ENST00000498020 NEUROD6Q96NK8 337 aa9.66□□□□□ -0.86
HLA-DMB-262ENST00000498020 MPHOSPH8Q99549 860 aa9.66□□□□□ -0.86
HLA-DMB-262ENST00000498020 GNPATO15228 680 aa9.66□□□□□ -0.86
HLA-DMB-262ENST00000498020 RBM26Q5T8P6 1007 aaKnown RBP9.66□□□□□ -0.86
HLA-DMB-262ENST00000498020 NBPF6Q5VWK0 638 aa9.66□□□□□ -0.86
HLA-DMB-262ENST00000498020 NBPF4Q96M43 638 aa9.66□□□□□ -0.86
HLA-DMB-262ENST00000498020 HSP90B1P14625 803 aaKnown RBP9.66□□□□□ -0.86
HLA-DMB-262ENST00000498020 RTCBQ9Y3I0 505 aaKnown RBP9.66□□□□□ -0.86
HLA-DMB-262ENST00000498020 HYPKQ9NX55 129 aa9.66□□□□□ -0.86
HLA-DMB-262ENST00000498020 PI4KAP2A4QPH2 592 aa9.65□□□□□ -0.86
HLA-DMB-262ENST00000498020 SDSP20132 328 aa9.65□□□□□ -0.86
HLA-DMB-262ENST00000498020 ARHGAP27Q6ZUM4 889 aa9.65□□□□□ -0.86
HLA-DMB-262ENST00000498020 PI4KAP1Q8N8J0 262 aa9.65□□□□□ -0.86
HLA-DMB-262ENST00000498020 MTMR7Q9Y216 660 aa9.65□□□□□ -0.86
HLA-DMB-262ENST00000498020 ZBTB7AO95365 584 aa9.65□□□□□ -0.86
HLA-DMB-262ENST00000498020 PDE1AP54750 535 aa9.65□□□□□ -0.86
HLA-DMB-262ENST00000498020 IL1RAPL2Q9NP60 686 aa9.65□□□□□ -0.86
HLA-DMB-262ENST00000498020 NPHP4O75161 1426 aaPredicted RBP9.65□□□□□ -0.87
HLA-DMB-262ENST00000498020 KIF20BQ96Q89 1820 aa9.65□□□□□ -0.87
HLA-DMB-262ENST00000498020 USP19O94966 1318 aa9.65□□□□□ -0.87
HLA-DMB-262ENST00000498020 R3HDM1Q15032 1099 aaKnown RBP9.65□□□□□ -0.87
HLA-DMB-262ENST00000498020 WDR78Q5VTH9 848 aa9.65□□□□□ -0.87
HLA-DMB-262ENST00000498020 JDP2Q8WYK2 163 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms