RNA–Protein interactions for RNA: ENST00000497871.1

ATPAF2-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-209ENST00000497871 KCPQ6ZWJ8 1503 aa24.52■■□□□ 1.52
ATPAF2-209ENST00000497871 STARD3NLO95772 234 aa24.52■■□□□ 1.52
ATPAF2-209ENST00000497871 COL3A1P02461 1466 aaPredicted RBP24.51■■□□□ 1.51
ATPAF2-209ENST00000497871 TEFQ10587 303 aa24.51■■□□□ 1.51
ATPAF2-209ENST00000497871 ADAMTS7Q9UKP4 1686 aa24.5■■□□□ 1.51
ATPAF2-209ENST00000497871 HSPA6P17066 643 aa24.5■■□□□ 1.51
ATPAF2-209ENST00000497871 CHRNA5P30532 468 aa24.5■■□□□ 1.51
ATPAF2-209ENST00000497871 NFIXQ14938 502 aa24.5■■□□□ 1.51
ATPAF2-209ENST00000497871 COL15A1P39059 1388 aa24.5■■□□□ 1.51
ATPAF2-209ENST00000497871 CANXP27824 592 aaKnown RBP24.49■■□□□ 1.51
ATPAF2-209ENST00000497871 ZNF790Q6PG37 636 aa24.49■■□□□ 1.51
ATPAF2-209ENST00000497871 TEX13AQ9BXU3 409 aaPredicted RBP24.49■■□□□ 1.51
ATPAF2-209ENST00000497871 ZNF496Q96IT1 587 aaPredicted RBP24.48■■□□□ 1.51
ATPAF2-209ENST00000497871 CFAP53Q96M91 514 aa24.48■■□□□ 1.51
ATPAF2-209ENST00000497871 BCL2L12Q9HB09 334 aa24.48■■□□□ 1.51
ATPAF2-209ENST00000497871 CEP350Q5VT06 3117 aa24.47■■□□□ 1.51
ATPAF2-209ENST00000497871 EIF5P55010 431 aaKnown RBP24.47■■□□□ 1.51
ATPAF2-209ENST00000497871 C9orf131Q5VYM1 1079 aa24.47■■□□□ 1.51
ATPAF2-209ENST00000497871 A0A087WZG4 1122 aa24.46■■□□□ 1.51
ATPAF2-209ENST00000497871 SERPINB2P05120 415 aa24.46■■□□□ 1.51
ATPAF2-209ENST00000497871 PHACTR3Q96KR7 559 aa24.45■■□□□ 1.5
ATPAF2-209ENST00000497871 NUDCQ9Y266 331 aa24.45■■□□□ 1.5
ATPAF2-209ENST00000497871 HEG1Q9ULI3 1381 aa24.44■■□□□ 1.5
ATPAF2-209ENST00000497871 TOMM70O94826 608 aa24.44■■□□□ 1.5
ATPAF2-209ENST00000497871 BRCA1P38398 1863 aaKnown RBP24.43■■□□□ 1.5
ATPAF2-209ENST00000497871 PRKAR2BP31323 418 aa24.43■■□□□ 1.5
ATPAF2-209ENST00000497871 RSPH6AQ9H0K4 717 aa24.43■■□□□ 1.5
ATPAF2-209ENST00000497871 FMNL2Q96PY5 1086 aa24.42■■□□□ 1.5
ATPAF2-209ENST00000497871 CEMIPQ8WUJ3 1361 aa24.42■■□□□ 1.5
ATPAF2-209ENST00000497871 NMRK2Q9NPI5 230 aa24.41■■□□□ 1.5
ATPAF2-209ENST00000497871 BTBD11A6QL63 1104 aa24.4■■□□□ 1.5
ATPAF2-209ENST00000497871 IL6STP40189 918 aaPredicted RBP24.4■■□□□ 1.5
ATPAF2-209ENST00000497871 UBR2Q8IWV8 1755 aa24.39■■□□□ 1.5
ATPAF2-209ENST00000497871 PPP2R1AP30153 589 aa24.39■■□□□ 1.49
ATPAF2-209ENST00000497871 BICDL1Q6ZP65 573 aa24.39■■□□□ 1.49
ATPAF2-209ENST00000497871 RNF181Q9P0P0 153 aa24.39■■□□□ 1.49
ATPAF2-209ENST00000497871 ARFGEF1Q9Y6D6 1849 aa24.39■■□□□ 1.49
ATPAF2-209ENST00000497871 VIRMAQ69YN4 1812 aaKnown RBP24.38■■□□□ 1.49
ATPAF2-209ENST00000497871 H0YIN7 160 aa24.38■■□□□ 1.49
ATPAF2-209ENST00000497871 U2AF1L5P0DN76 240 aaPredicted RBP24.38■■□□□ 1.49
ATPAF2-209ENST00000497871 U2AF1Q01081 240 aaKnown RBP eCLIP24.38■■□□□ 1.49
ATPAF2-209ENST00000497871 TBC1D2BQ9UPU7 963 aa24.38■■□□□ 1.49
ATPAF2-209ENST00000497871 NPM2Q86SE8 214 aaKnown RBP24.37■■□□□ 1.49
ATPAF2-209ENST00000497871 C2CD5Q86YS7 1000 aa24.37■■□□□ 1.49
ATPAF2-209ENST00000497871 TTLL6Q8N841 843 aa24.37■■□□□ 1.49
ATPAF2-209ENST00000497871 KDM2BQ8NHM5 1336 aa24.36■■□□□ 1.49
ATPAF2-209ENST00000497871 KCNQ3O43525 872 aa24.36■■□□□ 1.49
ATPAF2-209ENST00000497871 A1BGP04217 495 aa24.36■■□□□ 1.49
ATPAF2-209ENST00000497871 TBC1D9BQ66K14 1250 aa24.36■■□□□ 1.49
ATPAF2-209ENST00000497871 RTF1Q92541 710 aaKnown RBP24.36■■□□□ 1.49
ATPAF2-209ENST00000497871 ZNF330Q9Y3S2 320 aaPredicted RBP24.36■■□□□ 1.49
ATPAF2-209ENST00000497871 APLP1P51693 650 aa24.35■■□□□ 1.49
ATPAF2-209ENST00000497871 BRIP1Q9BX63 1249 aa24.34■■□□□ 1.49
ATPAF2-209ENST00000497871 PDZRN3Q9UPQ7 1066 aa24.34■■□□□ 1.49
ATPAF2-209ENST00000497871 NRXN2Q9P2S2 1712 aa24.34■■□□□ 1.49
ATPAF2-209ENST00000497871 C16orf71Q8IYS4 520 aaPredicted RBP24.33■■□□□ 1.49
ATPAF2-209ENST00000497871 RBM46Q8TBY0 533 aaKnown RBP24.33■■□□□ 1.49
ATPAF2-209ENST00000497871 HTATSF1O43719 755 aaKnown RBP24.32■■□□□ 1.48
ATPAF2-209ENST00000497871 PDE6BP35913 854 aa24.32■■□□□ 1.48
ATPAF2-209ENST00000497871 USP16Q9Y5T5 823 aa24.32■■□□□ 1.48
ATPAF2-209ENST00000497871 CARMIL3Q8ND23 1372 aa24.31■■□□□ 1.48
ATPAF2-209ENST00000497871 AFDNP55196 1824 aaKnown RBP24.31■■□□□ 1.48
ATPAF2-209ENST00000497871 CAMTA2O94983 1202 aa24.31■■□□□ 1.48
ATPAF2-209ENST00000497871 LMNB1P20700 586 aa24.31■■□□□ 1.48
ATPAF2-209ENST00000497871 MCM10Q7L590 875 aa24.31■■□□□ 1.48
ATPAF2-209ENST00000497871 SETDB2Q96T68 719 aa24.31■■□□□ 1.48
ATPAF2-209ENST00000497871 ZC3H4Q9UPT8 1303 aaKnown RBP24.31■■□□□ 1.48
ATPAF2-209ENST00000497871 SNRPA1P09661 255 aaKnown RBP24.3■■□□□ 1.48
ATPAF2-209ENST00000497871 RASSF7Q02833 373 aa24.3■■□□□ 1.48
ATPAF2-209ENST00000497871 PRR5LQ6MZQ0 368 aa24.3■■□□□ 1.48
ATPAF2-209ENST00000497871 RRAGCQ9HB90 399 aa24.3■■□□□ 1.48
ATPAF2-209ENST00000497871 SIPA1L3O60292 1781 aaPredicted RBP24.29■■□□□ 1.48
ATPAF2-209ENST00000497871 DZIP3Q86Y13 1208 aaKnown RBP24.29■■□□□ 1.48
ATPAF2-209ENST00000497871 ZNF622Q969S3 477 aaKnown RBP eCLIP24.28■■□□□ 1.48
ATPAF2-209ENST00000497871 FSTL1Q12841 308 aa24.27■■□□□ 1.48
ATPAF2-209ENST00000497871 PRAMEF22A3QJZ6 481 aa24.26■■□□□ 1.47
ATPAF2-209ENST00000497871 PRELPP51888 382 aa24.26■■□□□ 1.47
ATPAF2-209ENST00000497871 DCTN1Q14203 1278 aa24.26■■□□□ 1.47
ATPAF2-209ENST00000497871 CLEC4GQ6UXB4 293 aa24.26■■□□□ 1.47
ATPAF2-209ENST00000497871 CCDC24Q8N4L8 307 aa24.26■■□□□ 1.47
ATPAF2-209ENST00000497871 CNBD1Q8NA66 436 aa24.26■■□□□ 1.47
ATPAF2-209ENST00000497871 NFKBIEO00221 500 aa24.25■■□□□ 1.47
ATPAF2-209ENST00000497871 TAF7Q15545 349 aaPredicted RBP24.25■■□□□ 1.47
ATPAF2-209ENST00000497871 DNAJC5GQ8N7S2 189 aa24.25■■□□□ 1.47
ATPAF2-209ENST00000497871 GLTPD2A6NH11 291 aa24.24■■□□□ 1.47
ATPAF2-209ENST00000497871 NPHP1O15259 732 aa24.24■■□□□ 1.47
ATPAF2-209ENST00000497871 PIP4K2AP48426 406 aaPredicted RBP24.24■■□□□ 1.47
ATPAF2-209ENST00000497871 ST5P78524 1137 aa24.23■■□□□ 1.47
ATPAF2-209ENST00000497871 SBF1O95248 1867 aa24.23■■□□□ 1.47
ATPAF2-209ENST00000497871 C21orf2O43822 256 aa24.22■■□□□ 1.47
ATPAF2-209ENST00000497871 NEFMP07197 916 aa24.22■■□□□ 1.47
ATPAF2-209ENST00000497871 CNKSR1Q969H4 720 aa24.22■■□□□ 1.47
ATPAF2-209ENST00000497871 ZNF652Q9Y2D9 606 aa24.22■■□□□ 1.47
ATPAF2-209ENST00000497871 DLEC1Q9Y238 1755 aa24.21■■□□□ 1.47
ATPAF2-209ENST00000497871 RGL2O15211 777 aa24.21■■□□□ 1.47
ATPAF2-209ENST00000497871 STYK1Q6J9G0 422 aa24.21■■□□□ 1.47
ATPAF2-209ENST00000497871 SCN7AQ01118 1682 aa24.21■■□□□ 1.47
ATPAF2-209ENST00000497871 NBPF26B4DH59 902 aa24.2■■□□□ 1.46
ATPAF2-209ENST00000497871 SRGNP10124 158 aa24.2■■□□□ 1.46
ATPAF2-209ENST00000497871 VEGFAP15692 232 aaPredicted RBP24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms