RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 MIS18AQ9NYP9 233 aa18.24■□□□□ 0.51
VPS26A-209ENST00000497564 BTBD11A6QL63 1104 aa18.23■□□□□ 0.51
VPS26A-209ENST00000497564 BCAR3O75815 825 aa18.23■□□□□ 0.51
VPS26A-209ENST00000497564 AMIGO3Q86WK7 504 aa18.23■□□□□ 0.51
VPS26A-209ENST00000497564 TFCP2L1Q9NZI6 479 aa18.23■□□□□ 0.51
VPS26A-209ENST00000497564 LOC102724428A0A0B4J2F2 783 aa18.22■□□□□ 0.51
VPS26A-209ENST00000497564 SIK1P57059 783 aa18.22■□□□□ 0.51
VPS26A-209ENST00000497564 FKBP8Q14318 412 aa18.22■□□□□ 0.51
VPS26A-209ENST00000497564 SMIM5Q71RC9 77 aa18.22■□□□□ 0.51
VPS26A-209ENST00000497564 SLC4A9Q96Q91 983 aa18.22■□□□□ 0.51
VPS26A-209ENST00000497564 QSER1Q2KHR3 1735 aa18.22■□□□□ 0.51
VPS26A-209ENST00000497564 HEG1Q9ULI3 1381 aa18.21■□□□□ 0.51
VPS26A-209ENST00000497564 CABP4P57796 275 aa18.21■□□□□ 0.51
VPS26A-209ENST00000497564 ITPK1Q13572 414 aa18.21■□□□□ 0.51
VPS26A-209ENST00000497564 LINC00116Q8NCU8 138 aa18.21■□□□□ 0.51
VPS26A-209ENST00000497564 SSH1Q8WYL5 1049 aa18.21■□□□□ 0.51
VPS26A-209ENST00000497564 MTFR1LQ9H019 292 aa18.21■□□□□ 0.51
VPS26A-209ENST00000497564 N4BP2Q86UW6 1770 aaPredicted RBP18.2■□□□□ 0.5
VPS26A-209ENST00000497564 HOXB7P09629 217 aa18.2■□□□□ 0.5
VPS26A-209ENST00000497564 EIF4A1P60842 406 aaKnown RBP18.2■□□□□ 0.5
VPS26A-209ENST00000497564 NFATC2IPQ8NCF5 419 aa18.2■□□□□ 0.5
VPS26A-209ENST00000497564 SGIP1Q9BQI5 828 aa18.2■□□□□ 0.5
VPS26A-209ENST00000497564 C4BP0C0L5 1744 aa18.2■□□□□ 0.5
VPS26A-209ENST00000497564 KRT24Q2M2I5 525 aa18.19■□□□□ 0.5
VPS26A-209ENST00000497564 COL23A1Q86Y22 540 aaPredicted RBP18.19■□□□□ 0.5
VPS26A-209ENST00000497564 SMC4Q9NTJ3 1288 aa18.19■□□□□ 0.5
VPS26A-209ENST00000497564 KIF16BQ96L93 1317 aa18.19■□□□□ 0.5
VPS26A-209ENST00000497564 PPP1R1BQ9UD71 204 aaPredicted RBP18.18■□□□□ 0.5
VPS26A-209ENST00000497564 UTRNP46939 3433 aa18.17■□□□□ 0.5
VPS26A-209ENST00000497564 ELL2O00472 640 aaPredicted RBP18.17■□□□□ 0.5
VPS26A-209ENST00000497564 PLIN1O60240 522 aa18.17■□□□□ 0.5
VPS26A-209ENST00000497564 ATP6V1AP38606 617 aa18.17■□□□□ 0.5
VPS26A-209ENST00000497564 PDE3AQ14432 1141 aa18.17■□□□□ 0.5
VPS26A-209ENST00000497564 ZNF790Q6PG37 636 aa18.17■□□□□ 0.5
VPS26A-209ENST00000497564 MRPL50Q8N5N7 158 aaKnown RBP18.17■□□□□ 0.5
VPS26A-209ENST00000497564 RBM42Q9BTD8 480 aaKnown RBP18.17■□□□□ 0.5
VPS26A-209ENST00000497564 CHMP4AQ9BY43 222 aa18.17■□□□□ 0.5
VPS26A-209ENST00000497564 GOLGB1Q14789 3259 aaKnown RBP18.17■□□□□ 0.5
VPS26A-209ENST00000497564 KCNQ3O43525 872 aa18.16■□□□□ 0.5
VPS26A-209ENST00000497564 IRX6P78412 446 aaPredicted RBP18.16■□□□□ 0.5
VPS26A-209ENST00000497564 BCL2L13Q9BXK5 485 aa18.16■□□□□ 0.5
VPS26A-209ENST00000497564 KCPQ6ZWJ8 1503 aa18.16■□□□□ 0.5
VPS26A-209ENST00000497564 PTCD1O75127 700 aaKnown RBP18.15■□□□□ 0.5
VPS26A-209ENST00000497564 UBR3Q6ZT12 1888 aa18.15■□□□□ 0.5
VPS26A-209ENST00000497564 CICQ96RK0 1608 aaPredicted RBP18.15■□□□□ 0.5
VPS26A-209ENST00000497564 MSH5O43196 834 aa18.14■□□□□ 0.49
VPS26A-209ENST00000497564 MS4A1P11836 297 aa18.14■□□□□ 0.49
VPS26A-209ENST00000497564 ZKSCAN2Q63HK3 967 aa18.14■□□□□ 0.49
VPS26A-209ENST00000497564 ARHGAP45Q92619 1136 aa18.14■□□□□ 0.49
VPS26A-209ENST00000497564 AK7Q96M32 723 aa18.14■□□□□ 0.49
VPS26A-209ENST00000497564 IPO8O15397 1037 aaKnown RBP18.13■□□□□ 0.49
VPS26A-209ENST00000497564 PHF14O94880 888 aa18.13■□□□□ 0.49
VPS26A-209ENST00000497564 SLC39A6Q13433 755 aa18.13■□□□□ 0.49
VPS26A-209ENST00000497564 MSL1Q68DK7 614 aa18.13■□□□□ 0.49
VPS26A-209ENST00000497564 ZNF831Q5JPB2 1677 aa18.12■□□□□ 0.49
VPS26A-209ENST00000497564 COL24A1Q17RW2 1714 aa18.12■□□□□ 0.49
VPS26A-209ENST00000497564 GIGYF1O75420 1035 aaPredicted RBP18.12■□□□□ 0.49
VPS26A-209ENST00000497564 CANXP27824 592 aaKnown RBP18.12■□□□□ 0.49
VPS26A-209ENST00000497564 CCDC30Q5VVM6 783 aa18.12■□□□□ 0.49
VPS26A-209ENST00000497564 TTC5Q8N0Z6 440 aa18.12■□□□□ 0.49
VPS26A-209ENST00000497564 SLC16A10Q8TF71 515 aa18.12■□□□□ 0.49
VPS26A-209ENST00000497564 FRAT1Q92837 279 aaPredicted RBP18.12■□□□□ 0.49
VPS26A-209ENST00000497564 COL5A3P25940 1745 aaPredicted RBP18.12■□□□□ 0.49
VPS26A-209ENST00000497564 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.11■□□□□ 0.49
VPS26A-209ENST00000497564 GNPATO15228 680 aa18.11■□□□□ 0.49
VPS26A-209ENST00000497564 C20orf194Q5TEA3 1177 aa18.11■□□□□ 0.49
VPS26A-209ENST00000497564 ATF7IPQ6VMQ6 1270 aa18.11■□□□□ 0.49
VPS26A-209ENST00000497564 FHDC1Q9C0D6 1143 aaPredicted RBP18.11■□□□□ 0.49
VPS26A-209ENST00000497564 NOB1Q9ULX3 412 aaKnown RBP18.11■□□□□ 0.49
VPS26A-209ENST00000497564 MYH14Q7Z406 1995 aaKnown RBP18.1■□□□□ 0.49
VPS26A-209ENST00000497564 TJP1Q07157 1748 aa18.1■□□□□ 0.49
VPS26A-209ENST00000497564 FMNL2Q96PY5 1086 aa18.1■□□□□ 0.49
VPS26A-209ENST00000497564 ARXQ96QS3 562 aa18.1■□□□□ 0.49
VPS26A-209ENST00000497564 PTPRCP08575 1304 aa18.09■□□□□ 0.49
VPS26A-209ENST00000497564 TRIM27P14373 513 aa18.09■□□□□ 0.49
VPS26A-209ENST00000497564 HDGFL1Q5TGJ6 251 aa18.09■□□□□ 0.49
VPS26A-209ENST00000497564 ZNF496Q96IT1 587 aaPredicted RBP18.09■□□□□ 0.49
VPS26A-209ENST00000497564 STK31Q9BXU1 1019 aa18.09■□□□□ 0.49
VPS26A-209ENST00000497564 CRBNQ96SW2 442 aa18.08■□□□□ 0.48
VPS26A-209ENST00000497564 SNRPA1P09661 255 aaKnown RBP18.07■□□□□ 0.48
VPS26A-209ENST00000497564 SSFA2P28290 1259 aa18.07■□□□□ 0.48
VPS26A-209ENST00000497564 DZIP1LQ8IYY4 767 aaKnown RBP18.07■□□□□ 0.48
VPS26A-209ENST00000497564 EXOC6Q8TAG9 804 aa18.07■□□□□ 0.48
VPS26A-209ENST00000497564 SYT17Q9BSW7 474 aa18.07■□□□□ 0.48
VPS26A-209ENST00000497564 API5Q9BZZ5 524 aaKnown RBP18.07■□□□□ 0.48
VPS26A-209ENST00000497564 PPP4R2Q9NY27 417 aa18.07■□□□□ 0.48
VPS26A-209ENST00000497564 TCERG1O14776 1098 aaKnown RBP18.06■□□□□ 0.48
VPS26A-209ENST00000497564 SLC4A2P04920 1241 aa18.06■□□□□ 0.48
VPS26A-209ENST00000497564 DNAJC10Q8IXB1 793 aa18.06■□□□□ 0.48
VPS26A-209ENST00000497564 FLAD1Q8NFF5 587 aa18.06■□□□□ 0.48
VPS26A-209ENST00000497564 ABCC4O15439 1325 aa18.05■□□□□ 0.48
VPS26A-209ENST00000497564 CNTNAP4Q9C0A0 1308 aa18.05■□□□□ 0.48
VPS26A-209ENST00000497564 RLBP1P12271 317 aa18.05■□□□□ 0.48
VPS26A-209ENST00000497564 POLD1P28340 1107 aa18.05■□□□□ 0.48
VPS26A-209ENST00000497564 CRKLP46109 303 aaKnown RBP18.05■□□□□ 0.48
VPS26A-209ENST00000497564 FTSJ3Q8IY81 847 aaKnown RBP18.05■□□□□ 0.48
VPS26A-209ENST00000497564 PANK1Q8TE04 598 aa18.05■□□□□ 0.48
VPS26A-209ENST00000497564 TNNQ9UQP3 1299 aa18.05■□□□□ 0.48
VPS26A-209ENST00000497564 PXDNLA1KZ92 1463 aa18.04■□□□□ 0.48
VPS26A-209ENST00000497564 HMGB2P26583 209 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms