RNA–Protein interactions for RNA: ENST00000497403.5

GRHL1-208, Transcript of grainyhead like transcription factor 1, human

TSL 2

Gene GRHL1, Length 5,400 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GRHL1-208	ENST00000497403	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.49	□□□□□ -0.25
GRHL1-208	ENST00000497403	NOC3L	Q8WTT2	800 aa	Known RBP	13.49	□□□□□ -0.25
GRHL1-208	ENST00000497403	CYP46A1	Q9Y6A2	500 aa		13.49	□□□□□ -0.25
GRHL1-208	ENST00000497403	NPC1L1	Q9UHC9	1359 aa		13.49	□□□□□ -0.25
GRHL1-208	ENST00000497403	A2ML1	A8K2U0	1454 aa		13.49	□□□□□ -0.25
GRHL1-208	ENST00000497403	SIL1	Q9H173	461 aa		13.49	□□□□□ -0.25
GRHL1-208	ENST00000497403	CCDC196	A0A1B0GTZ2	297 aa		13.48	□□□□□ -0.25
GRHL1-208	ENST00000497403	TMEM132A	Q24JP5	1023 aa		13.48	□□□□□ -0.25
GRHL1-208	ENST00000497403	CERS3	Q8IU89	383 aa		13.48	□□□□□ -0.25
GRHL1-208	ENST00000497403	TTC37	Q6PGP7	1564 aa		13.48	□□□□□ -0.25
GRHL1-208	ENST00000497403	MYOM2	P54296	1465 aa		13.48	□□□□□ -0.25
GRHL1-208	ENST00000497403	BECN2	A8MW95	431 aa		13.48	□□□□□ -0.25
GRHL1-208	ENST00000497403	ARHGAP45	Q92619	1136 aa		13.48	□□□□□ -0.25
GRHL1-208	ENST00000497403	HMGB1	P09429	215 aa	Known RBP	13.48	□□□□□ -0.25
GRHL1-208	ENST00000497403	HOXB7	P09629	217 aa		13.48	□□□□□ -0.25
GRHL1-208	ENST00000497403	OGFOD1	Q8N543	542 aa		13.48	□□□□□ -0.25
GRHL1-208	ENST00000497403	RRP12	Q5JTH9	1297 aa	Known RBP	13.47	□□□□□ -0.25
GRHL1-208	ENST00000497403	ANKRD13D	Q6ZTN6	518 aa		13.47	□□□□□ -0.25
GRHL1-208	ENST00000497403	PLCG2	P16885	1265 aa		13.47	□□□□□ -0.25
GRHL1-208	ENST00000497403		U3KPZ7	1027 aa	Predicted RBP	13.47	□□□□□ -0.25
GRHL1-208	ENST00000497403		B4DLN1	442 aa		13.47	□□□□□ -0.25
GRHL1-208	ENST00000497403	MRPL12	P52815	198 aa	Known RBP	13.47	□□□□□ -0.25
GRHL1-208	ENST00000497403	TMEM94	Q12767	1356 aa		13.47	□□□□□ -0.25
GRHL1-208	ENST00000497403	CUL5	Q93034	780 aa		13.46	□□□□□ -0.25
GRHL1-208	ENST00000497403	FAM135B	Q49AJ0	1406 aa		13.46	□□□□□ -0.25
GRHL1-208	ENST00000497403	FLII	Q13045	1269 aa		13.46	□□□□□ -0.25
GRHL1-208	ENST00000497403	SEC63	Q9UGP8	760 aa	Known RBP	13.46	□□□□□ -0.25
GRHL1-208	ENST00000497403	CCNL1	Q9UK58	526 aa	Predicted RBP	13.46	□□□□□ -0.25
GRHL1-208	ENST00000497403	RTL1	A6NKG5	1358 aa		13.46	□□□□□ -0.25
GRHL1-208	ENST00000497403	NAT10	Q9H0A0	1025 aa	Known RBP	13.46	□□□□□ -0.26
GRHL1-208	ENST00000497403	MBD5	Q9P267	1494 aa		13.46	□□□□□ -0.26
GRHL1-208	ENST00000497403	TNNI2	P48788	182 aa		13.46	□□□□□ -0.26
GRHL1-208	ENST00000497403	ANKAR	Q7Z5J8	1434 aa		13.45	□□□□□ -0.26
GRHL1-208	ENST00000497403	DHX8	Q14562	1220 aa	Known RBP	13.45	□□□□□ -0.26
GRHL1-208	ENST00000497403	DZIP3	Q86Y13	1208 aa	Known RBP	13.45	□□□□□ -0.26
GRHL1-208	ENST00000497403	PES1	O00541	588 aa	Known RBP	13.45	□□□□□ -0.26
GRHL1-208	ENST00000497403	IDH1	O75874	414 aa	Known RBP	13.45	□□□□□ -0.26
GRHL1-208	ENST00000497403	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.45	□□□□□ -0.26
GRHL1-208	ENST00000497403	ZNF444	Q8N0Y2	327 aa	Predicted RBP	13.45	□□□□□ -0.26
GRHL1-208	ENST00000497403	MKNK2	Q9HBH9	465 aa		13.45	□□□□□ -0.26
GRHL1-208	ENST00000497403	RXRB	P28702	533 aa		13.45	□□□□□ -0.26
GRHL1-208	ENST00000497403	EIF4A2	Q14240	407 aa	Known RBP	13.45	□□□□□ -0.26
GRHL1-208	ENST00000497403	MAP3K2	Q9Y2U5	619 aa		13.45	□□□□□ -0.26
GRHL1-208	ENST00000497403	LETM1	O95202	739 aa	Predicted RBP	13.45	□□□□□ -0.26
GRHL1-208	ENST00000497403	IPO9	Q96P70	1041 aa	Known RBP	13.45	□□□□□ -0.26
GRHL1-208	ENST00000497403	KIF24	Q5T7B8	1368 aa		13.44	□□□□□ -0.26
GRHL1-208	ENST00000497403	PDE4A	P27815	886 aa		13.44	□□□□□ -0.26
GRHL1-208	ENST00000497403	OLFM4	Q6UX06	510 aa		13.44	□□□□□ -0.26
GRHL1-208	ENST00000497403	BICD2	Q8TD16	824 aa		13.44	□□□□□ -0.26
GRHL1-208	ENST00000497403	THRAP3	Q9Y2W1	955 aa	Known RBP	13.44	□□□□□ -0.26
GRHL1-208	ENST00000497403	MAST3	O60307	1309 aa		13.44	□□□□□ -0.26
GRHL1-208	ENST00000497403	ERVV-2	B6SEH9	535 aa		13.44	□□□□□ -0.26
GRHL1-208	ENST00000497403	CCDC70	Q6NSX1	233 aa		13.44	□□□□□ -0.26
GRHL1-208	ENST00000497403	FANCI	Q9NVI1	1328 aa		13.44	□□□□□ -0.26
GRHL1-208	ENST00000497403	ZFY	P08048	801 aa	Predicted RBP	13.44	□□□□□ -0.26
GRHL1-208	ENST00000497403	CREBRF	Q8IUR6	639 aa		13.44	□□□□□ -0.26
GRHL1-208	ENST00000497403	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.44	□□□□□ -0.26
GRHL1-208	ENST00000497403	ACSBG1	Q96GR2	724 aa		13.44	□□□□□ -0.26
GRHL1-208	ENST00000497403	SLK	Q9H2G2	1235 aa	Predicted RBP	13.44	□□□□□ -0.26
GRHL1-208	ENST00000497403	ABCF2	Q9UG63	623 aa		13.44	□□□□□ -0.26
GRHL1-208	ENST00000497403	RIMBP3C	A6NJZ7	1639 aa		13.44	□□□□□ -0.26
GRHL1-208	ENST00000497403	RIMBP3B	A6NNM3	1639 aa		13.44	□□□□□ -0.26
GRHL1-208	ENST00000497403	RIMBP3	Q9UFD9	1639 aa		13.44	□□□□□ -0.26
GRHL1-208	ENST00000497403	EPS15	P42566	896 aa		13.43	□□□□□ -0.26
GRHL1-208	ENST00000497403	PPP4R3A	Q6IN85	833 aa		13.43	□□□□□ -0.26
GRHL1-208	ENST00000497403	C22orf23	Q9BZE7	217 aa		13.43	□□□□□ -0.26
GRHL1-208	ENST00000497403	ZBTB3	Q9H5J0	574 aa		13.43	□□□□□ -0.26
GRHL1-208	ENST00000497403	CEP131	Q9UPN4	1083 aa		13.43	□□□□□ -0.26
GRHL1-208	ENST00000497403	ABCA9	Q8IUA7	1624 aa		13.43	□□□□□ -0.26
GRHL1-208	ENST00000497403	IQCA1	Q86XH1	822 aa		13.43	□□□□□ -0.26
GRHL1-208	ENST00000497403	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.43	□□□□□ -0.26
GRHL1-208	ENST00000497403	LDHAL6A	Q6ZMR3	332 aa		13.43	□□□□□ -0.26
GRHL1-208	ENST00000497403	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.43	□□□□□ -0.26
GRHL1-208	ENST00000497403	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.43	□□□□□ -0.26
GRHL1-208	ENST00000497403		A0A1W2PP64	1363 aa		13.43	□□□□□ -0.26
GRHL1-208	ENST00000497403	PDE4B	Q07343	736 aa		13.43	□□□□□ -0.26
GRHL1-208	ENST00000497403	CHD1L	Q86WJ1	897 aa		13.43	□□□□□ -0.26
GRHL1-208	ENST00000497403	PHAX	Q9H814	394 aa	Known RBP	13.43	□□□□□ -0.26
GRHL1-208	ENST00000497403	TET3	O43151	1660 aa		13.42	□□□□□ -0.26
GRHL1-208	ENST00000497403	RDX	P35241	583 aa	Known RBP	13.42	□□□□□ -0.26
GRHL1-208	ENST00000497403	FAM196A	Q6ZSG2	479 aa		13.42	□□□□□ -0.26
GRHL1-208	ENST00000497403	RNMT	O43148	476 aa	Known RBP	13.42	□□□□□ -0.26
GRHL1-208	ENST00000497403	KRT18	P05783	430 aa	Known RBP	13.42	□□□□□ -0.26
GRHL1-208	ENST00000497403	PCMTD1	Q96MG8	357 aa	Predicted RBP	13.42	□□□□□ -0.26
GRHL1-208	ENST00000497403	CHMP5	Q9NZZ3	219 aa		13.42	□□□□□ -0.26
GRHL1-208	ENST00000497403	PDZRN3	Q9UPQ7	1066 aa		13.42	□□□□□ -0.26
GRHL1-208	ENST00000497403	SBNO2	Q9Y2G9	1366 aa		13.42	□□□□□ -0.26
GRHL1-208	ENST00000497403	ZNF76	P36508	570 aa		13.42	□□□□□ -0.26
GRHL1-208	ENST00000497403	KSR2	Q6VAB6	950 aa		13.42	□□□□□ -0.26
GRHL1-208	ENST00000497403	NAPB	Q9H115	298 aa		13.42	□□□□□ -0.26
GRHL1-208	ENST00000497403	DACH1	Q9UI36	760 aa		13.42	□□□□□ -0.26
GRHL1-208	ENST00000497403	VPS37C	A5D8V6	355 aa	Predicted RBP	13.42	□□□□□ -0.26
GRHL1-208	ENST00000497403	HSP90AB2P	Q58FF8	381 aa		13.41	□□□□□ -0.26
GRHL1-208	ENST00000497403	SYNM	O15061	1565 aa		13.41	□□□□□ -0.26
GRHL1-208	ENST00000497403	ABCC3	O15438	1527 aa		13.41	□□□□□ -0.26
GRHL1-208	ENST00000497403	BLOC1S2	Q6QNY1	142 aa		13.41	□□□□□ -0.26
GRHL1-208	ENST00000497403	ATP7B	P35670	1465 aa		13.4	□□□□□ -0.26
GRHL1-208	ENST00000497403	STIM1	Q13586	685 aa		13.4	□□□□□ -0.26
GRHL1-208	ENST00000497403	GLI2	P10070	1586 aa		13.4	□□□□□ -0.26
GRHL1-208	ENST00000497403	GPT	P24298	496 aa		13.4	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms