RNA–Protein interactions for RNA: ENST00000497269.5

MSH5-219, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-219ENST00000497269 SMCPP49901 116 aaPredicted RBP9.89□□□□□ -0.83
MSH5-219ENST00000497269 SCARF1Q14162 830 aa9.89□□□□□ -0.83
MSH5-219ENST00000497269 TSEN34Q9BSV6 310 aaKnown RBP9.89□□□□□ -0.83
MSH5-219ENST00000497269 ATP13A2Q9NQ11 1180 aa9.89□□□□□ -0.83
MSH5-219ENST00000497269 RBM19Q9Y4C8 960 aaKnown RBP9.89□□□□□ -0.83
MSH5-219ENST00000497269 WDR7Q9Y4E6 1490 aa9.89□□□□□ -0.83
MSH5-219ENST00000497269 CD109Q6YHK3 1445 aa9.89□□□□□ -0.83
MSH5-219ENST00000497269 SFI1A8K8P3 1242 aa9.88□□□□□ -0.83
MSH5-219ENST00000497269 LCE2BO14633 110 aa9.88□□□□□ -0.83
MSH5-219ENST00000497269 SCNN1DP51172 638 aa9.88□□□□□ -0.83
MSH5-219ENST00000497269 DPYDQ12882 1025 aa9.88□□□□□ -0.83
MSH5-219ENST00000497269 PTK7Q13308 1070 aa9.88□□□□□ -0.83
MSH5-219ENST00000497269 ZFP42Q96MM3 310 aa9.88□□□□□ -0.83
MSH5-219ENST00000497269 NOVA2Q9UNW9 492 aaKnown RBP9.88□□□□□ -0.83
MSH5-219ENST00000497269 GNRH1P01148 92 aa9.87□□□□□ -0.83
MSH5-219ENST00000497269 IL2RAP01589 272 aa9.87□□□□□ -0.83
MSH5-219ENST00000497269 SRPK2P78362 688 aaKnown RBP9.87□□□□□ -0.83
MSH5-219ENST00000497269 CRIPAKQ8N1N5 446 aa9.87□□□□□ -0.83
MSH5-219ENST00000497269 NLRP3Q96P20 1036 aa9.87□□□□□ -0.83
MSH5-219ENST00000497269 GOLGA3Q08378 1498 aa9.86□□□□□ -0.83
MSH5-219ENST00000497269 TEX14Q8IWB6 1497 aa9.86□□□□□ -0.83
MSH5-219ENST00000497269 PRXQ9BXM0 1461 aa9.86□□□□□ -0.83
MSH5-219ENST00000497269 FIGNL2A6NMB9 653 aa9.86□□□□□ -0.83
MSH5-219ENST00000497269 FAM196BA6NMK8 535 aa9.86□□□□□ -0.83
MSH5-219ENST00000497269 TMEM229AB2RXF0 380 aa9.86□□□□□ -0.83
MSH5-219ENST00000497269 ABCA8O94911 1581 aa9.86□□□□□ -0.83
MSH5-219ENST00000497269 CTSOP43234 321 aaPredicted RBP9.86□□□□□ -0.83
MSH5-219ENST00000497269 ANKMY2Q8IV38 441 aa9.86□□□□□ -0.83
MSH5-219ENST00000497269 CNKSR1Q969H4 720 aa9.86□□□□□ -0.83
MSH5-219ENST00000497269 ZNF358Q9NW07 568 aa9.86□□□□□ -0.83
MSH5-219ENST00000497269 CARNS1A5YM72 827 aa9.85□□□□□ -0.83
MSH5-219ENST00000497269 SOBPA7XYQ1 873 aa9.85□□□□□ -0.83
MSH5-219ENST00000497269 ESCO1Q5FWF5 840 aa9.85□□□□□ -0.83
MSH5-219ENST00000497269 LARGE2Q8N3Y3 721 aa9.85□□□□□ -0.83
MSH5-219ENST00000497269 STK32AQ8WU08 396 aa9.85□□□□□ -0.83
MSH5-219ENST00000497269 GMPR2Q9P2T1 348 aaKnown RBP9.85□□□□□ -0.83
MSH5-219ENST00000497269 ZMIZ1Q9ULJ6 1067 aa9.85□□□□□ -0.83
MSH5-219ENST00000497269 ACIN1Q9UKV3 1341 aaKnown RBP9.84□□□□□ -0.83
MSH5-219ENST00000497269 SPINT1O43278 529 aa9.84□□□□□ -0.83
MSH5-219ENST00000497269 RAPGEF3O95398 923 aa9.84□□□□□ -0.83
MSH5-219ENST00000497269 ATP10BO94823 1461 aa9.84□□□□□ -0.83
MSH5-219ENST00000497269 INHAP05111 366 aa9.83□□□□□ -0.84
MSH5-219ENST00000497269 CLN3Q13286 438 aa9.83□□□□□ -0.84
MSH5-219ENST00000497269 TLR1Q15399 786 aa9.83□□□□□ -0.84
MSH5-219ENST00000497269 SLC27A3Q5K4L6 730 aa9.83□□□□□ -0.84
MSH5-219ENST00000497269 SIX5Q8N196 739 aa9.83□□□□□ -0.84
MSH5-219ENST00000497269 TSEN2Q8NCE0 465 aaKnown RBP9.83□□□□□ -0.84
MSH5-219ENST00000497269 FAM200AQ8TCP9 573 aa9.83□□□□□ -0.84
MSH5-219ENST00000497269 PPP1R15AO75807 674 aaPredicted RBP9.82□□□□□ -0.84
MSH5-219ENST00000497269 ATG7O95352 703 aa9.82□□□□□ -0.84
MSH5-219ENST00000497269 SEC13P55735 322 aa9.82□□□□□ -0.84
MSH5-219ENST00000497269 TBCELQ5QJ74 424 aa9.82□□□□□ -0.84
MSH5-219ENST00000497269 FOXD4L5Q5VV16 416 aaPredicted RBP9.82□□□□□ -0.84
MSH5-219ENST00000497269 TNS4Q8IZW8 715 aa9.82□□□□□ -0.84
MSH5-219ENST00000497269 GAS2L2Q8NHY3 880 aa9.82□□□□□ -0.84
MSH5-219ENST00000497269 HINFPQ9BQA5 517 aa9.82□□□□□ -0.84
MSH5-219ENST00000497269 ESYT1Q9BSJ8 1104 aa9.82□□□□□ -0.84
MSH5-219ENST00000497269 TTLL8A6PVC2 850 aa9.81□□□□□ -0.84
MSH5-219ENST00000497269 DKK1O94907 266 aa9.81□□□□□ -0.84
MSH5-219ENST00000497269 CSB-PGBD3P0DP91 1061 aa9.81□□□□□ -0.84
MSH5-219ENST00000497269 CENPCQ03188 943 aa9.81□□□□□ -0.84
MSH5-219ENST00000497269 ARXQ96QS3 562 aa9.81□□□□□ -0.84
MSH5-219ENST00000497269 TMEM164Q5U3C3 297 aa9.8□□□□□ -0.84
MSH5-219ENST00000497269 PRICKLE2Q7Z3G6 844 aa9.8□□□□□ -0.84
MSH5-219ENST00000497269 RETREG2Q8NC44 543 aa9.8□□□□□ -0.84
MSH5-219ENST00000497269 XAGE2Q96GT9 111 aa9.8□□□□□ -0.84
MSH5-219ENST00000497269 KIF21BO75037 1637 aa9.8□□□□□ -0.84
MSH5-219ENST00000497269 FHOD3Q2V2M9 1422 aa9.8□□□□□ -0.84
MSH5-219ENST00000497269 CFAP43Q8NDM7 1665 aa9.8□□□□□ -0.84
MSH5-219ENST00000497269 ARID4BQ4LE39 1312 aaPredicted RBP9.8□□□□□ -0.84
MSH5-219ENST00000497269 MAGI3Q5TCQ9 1506 aa9.79□□□□□ -0.84
MSH5-219ENST00000497269 POTECB2RU33 542 aa9.79□□□□□ -0.84
MSH5-219ENST00000497269 BACH1O14867 736 aa9.79□□□□□ -0.84
MSH5-219ENST00000497269 RHOQP17081 205 aa9.79□□□□□ -0.84
MSH5-219ENST00000497269 HECW2Q9P2P5 1572 aa9.79□□□□□ -0.84
MSH5-219ENST00000497269 MAN1A2O60476 641 aa9.78□□□□□ -0.84
MSH5-219ENST00000497269 TMEM214Q6NUQ4 689 aaKnown RBP9.78□□□□□ -0.84
MSH5-219ENST00000497269 RNF217Q8TC41 542 aa9.78□□□□□ -0.84
MSH5-219ENST00000497269 ZSCAN10Q96SZ4 725 aaPredicted RBP9.78□□□□□ -0.84
MSH5-219ENST00000497269 DNMT3LQ9UJW3 386 aa9.78□□□□□ -0.84
MSH5-219ENST00000497269 USP3Q9Y6I4 520 aa9.78□□□□□ -0.84
MSH5-219ENST00000497269 SOS2Q07890 1332 aaPredicted RBP9.78□□□□□ -0.84
MSH5-219ENST00000497269 PHKA2P46019 1235 aa9.77□□□□□ -0.85
MSH5-219ENST00000497269 SMTNP53814 917 aa9.77□□□□□ -0.85
MSH5-219ENST00000497269 RAPGEF6Q8TEU7 1601 aa9.76□□□□□ -0.85
MSH5-219ENST00000497269 PLEKHD1A6NEE1 506 aa9.76□□□□□ -0.85
MSH5-219ENST00000497269 A6NJY4 79 aa9.76□□□□□ -0.85
MSH5-219ENST00000497269 C11orf95C9JLR9 678 aaPredicted RBP9.76□□□□□ -0.85
MSH5-219ENST00000497269 SNRPBP14678 240 aaKnown RBP9.76□□□□□ -0.85
MSH5-219ENST00000497269 GTF2E1P29083 439 aaPredicted RBP9.76□□□□□ -0.85
MSH5-219ENST00000497269 ELOAQ14241 798 aaKnown RBP9.76□□□□□ -0.85
MSH5-219ENST00000497269 FHDC1Q9C0D6 1143 aaPredicted RBP9.76□□□□□ -0.85
MSH5-219ENST00000497269 TSPAN10Q9H1Z9 355 aaPredicted RBP9.76□□□□□ -0.85
MSH5-219ENST00000497269 WASLO00401 505 aaPredicted RBP9.75□□□□□ -0.85
MSH5-219ENST00000497269 PRMT3O60678 531 aa9.75□□□□□ -0.85
MSH5-219ENST00000497269 RNF144AP50876 292 aaPredicted RBP9.75□□□□□ -0.85
MSH5-219ENST00000497269 POU4F2Q12837 409 aa9.75□□□□□ -0.85
MSH5-219ENST00000497269 PRIMPOLQ96LW4 560 aa9.75□□□□□ -0.85
MSH5-219ENST00000497269 SENP2Q9HC62 589 aa9.75□□□□□ -0.85
MSH5-219ENST00000497269 HRH3Q9Y5N1 445 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms