RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 GATA4P43694 442 aa7.55□□□□□ -1.2
VPS26A-208ENST00000497022 TLR1Q15399 786 aa7.55□□□□□ -1.2
VPS26A-208ENST00000497022 ZCCHC2Q9C0B9 1178 aaKnown RBP7.55□□□□□ -1.2
VPS26A-208ENST00000497022 USP4Q13107 963 aa7.54□□□□□ -1.2
VPS26A-208ENST00000497022 DOC2BQ14184 412 aa7.54□□□□□ -1.2
VPS26A-208ENST00000497022 ETNK1Q9HBU6 452 aa7.54□□□□□ -1.2
VPS26A-208ENST00000497022 ATXN7O15265 892 aaPredicted RBP7.53□□□□□ -1.2
VPS26A-208ENST00000497022 ATP4AP20648 1035 aa7.53□□□□□ -1.2
VPS26A-208ENST00000497022 PLA2G4AP47712 749 aa7.53□□□□□ -1.2
VPS26A-208ENST00000497022 FCHSD1Q86WN1 690 aa7.52□□□□□ -1.21
VPS26A-208ENST00000497022 SIRT1Q96EB6 747 aa7.52□□□□□ -1.21
VPS26A-208ENST00000497022 TRIM11Q96F44 468 aa7.52□□□□□ -1.21
VPS26A-208ENST00000497022 SPDYE3A6NKU9 549 aa7.51□□□□□ -1.21
VPS26A-208ENST00000497022 MAPTP10636 758 aaKnown RBP7.51□□□□□ -1.21
VPS26A-208ENST00000497022 TNP2Q05952 138 aa7.51□□□□□ -1.21
VPS26A-208ENST00000497022 NIFKQ9BYG3 293 aaKnown RBP7.51□□□□□ -1.21
VPS26A-208ENST00000497022 KLF15Q9UIH9 416 aa7.51□□□□□ -1.21
VPS26A-208ENST00000497022 DOLKQ9UPQ8 538 aa7.51□□□□□ -1.21
VPS26A-208ENST00000497022 FAM157BP0CG42 384 aa7.5□□□□□ -1.21
VPS26A-208ENST00000497022 ZNF468Q5VIY5 522 aaPredicted RBP7.5□□□□□ -1.21
VPS26A-208ENST00000497022 PLVAPQ9BX97 442 aa7.5□□□□□ -1.21
VPS26A-208ENST00000497022 DCDC2BA2VCK2 349 aa7.49□□□□□ -1.21
VPS26A-208ENST00000497022 RSPO4Q2I0M5 234 aaPredicted RBP7.49□□□□□ -1.21
VPS26A-208ENST00000497022 NBPF1Q3BBV0 1214 aa7.49□□□□□ -1.21
VPS26A-208ENST00000497022 A0A1W2PNR3 127 aa7.48□□□□□ -1.21
VPS26A-208ENST00000497022 INHAP05111 366 aa7.48□□□□□ -1.21
VPS26A-208ENST00000497022 CD33P20138 364 aa7.48□□□□□ -1.21
VPS26A-208ENST00000497022 NKAPLQ5M9Q1 402 aa7.48□□□□□ -1.21
VPS26A-208ENST00000497022 PHTF2Q8N3S3 785 aa7.48□□□□□ -1.21
VPS26A-208ENST00000497022 ZDHHC3Q9NYG2 299 aa7.48□□□□□ -1.21
VPS26A-208ENST00000497022 TBC1D2BQ9UPU7 963 aa7.48□□□□□ -1.21
VPS26A-208ENST00000497022 SCO2A0A1W2PP80 73 aa7.47□□□□□ -1.21
VPS26A-208ENST00000497022 KHNYNO15037 678 aaKnown RBP7.47□□□□□ -1.21
VPS26A-208ENST00000497022 TATP17735 454 aaPredicted RBP7.47□□□□□ -1.21
VPS26A-208ENST00000497022 SCNN1DP51172 638 aa7.47□□□□□ -1.21
VPS26A-208ENST00000497022 EIF4G2P78344 907 aaKnown RBP eCLIP7.47□□□□□ -1.21
VPS26A-208ENST00000497022 LAMC2Q13753 1193 aa7.47□□□□□ -1.21
VPS26A-208ENST00000497022 PRRT3Q5FWE3 981 aa7.47□□□□□ -1.21
VPS26A-208ENST00000497022 SAMD5Q5TGI4 173 aa7.47□□□□□ -1.21
VPS26A-208ENST00000497022 AIDAQ96BJ3 306 aa7.47□□□□□ -1.21
VPS26A-208ENST00000497022 CHIC2Q9UKJ5 165 aa7.47□□□□□ -1.21
VPS26A-208ENST00000497022 HCN2Q9UL51 889 aa7.47□□□□□ -1.21
VPS26A-208ENST00000497022 ELOA3CA0A087WX78 387 aaPredicted RBP7.46□□□□□ -1.22
VPS26A-208ENST00000497022 ELOA3DA6NLF2 546 aaPredicted RBP7.46□□□□□ -1.22
VPS26A-208ENST00000497022 STAU1O95793 577 aaKnown RBP7.46□□□□□ -1.22
VPS26A-208ENST00000497022 GDF10P55107 478 aa7.46□□□□□ -1.22
VPS26A-208ENST00000497022 ELOA3BQ3SY89 546 aa7.46□□□□□ -1.22
VPS26A-208ENST00000497022 SLFNL1Q499Z3 407 aa7.46□□□□□ -1.22
VPS26A-208ENST00000497022 ARSJQ5FYB0 599 aaPredicted RBP7.46□□□□□ -1.22
VPS26A-208ENST00000497022 KRTAP1-3Q8IUG1 177 aa7.46□□□□□ -1.22
VPS26A-208ENST00000497022 ELOA3Q8NG57 546 aa7.46□□□□□ -1.22
VPS26A-208ENST00000497022 PRM3Q9NNZ6 103 aa7.46□□□□□ -1.22
VPS26A-208ENST00000497022 PRR12Q9ULL5 1215 aa7.46□□□□□ -1.22
VPS26A-208ENST00000497022 APBA3O96018 575 aa7.45□□□□□ -1.22
VPS26A-208ENST00000497022 SMTNP53814 917 aa7.45□□□□□ -1.22
VPS26A-208ENST00000497022 PCBP4P57723 403 aaKnown RBP7.45□□□□□ -1.22
VPS26A-208ENST00000497022 TPSG1Q9NRR2 321 aa7.45□□□□□ -1.22
VPS26A-208ENST00000497022 EFSO43281 561 aa7.44□□□□□ -1.22
VPS26A-208ENST00000497022 DYRK3O43781 588 aa7.44□□□□□ -1.22
VPS26A-208ENST00000497022 ALAS2P22557 587 aa7.44□□□□□ -1.22
VPS26A-208ENST00000497022 MCM6Q14566 821 aa7.44□□□□□ -1.22
VPS26A-208ENST00000497022 TSGA10IPQ3SY00 556 aa7.44□□□□□ -1.22
VPS26A-208ENST00000497022 FOXD4L6Q3SYB3 417 aaPredicted RBP7.44□□□□□ -1.22
VPS26A-208ENST00000497022 OXLD1Q5BKU9 147 aa7.44□□□□□ -1.22
VPS26A-208ENST00000497022 ARTNQ5T4W7 220 aa7.44□□□□□ -1.22
VPS26A-208ENST00000497022 FOXD4L3Q6VB84 417 aaPredicted RBP7.44□□□□□ -1.22
VPS26A-208ENST00000497022 ZNF295-AS1Q8N0V1 137 aa7.44□□□□□ -1.22
VPS26A-208ENST00000497022 NACC1Q96RE7 527 aa7.44□□□□□ -1.22
VPS26A-208ENST00000497022 MDFIQ99750 246 aa7.44□□□□□ -1.22
VPS26A-208ENST00000497022 ZFP64Q9NPA5 681 aa7.44□□□□□ -1.22
VPS26A-208ENST00000497022 MARK1Q9P0L2 795 aa7.44□□□□□ -1.22
VPS26A-208ENST00000497022 GJA3Q9Y6H8 435 aa7.44□□□□□ -1.22
VPS26A-208ENST00000497022 IRF5Q13568 498 aa7.43□□□□□ -1.22
VPS26A-208ENST00000497022 MTFR1Q15390 333 aa7.43□□□□□ -1.22
VPS26A-208ENST00000497022 ZIC5Q96T25 663 aa7.43□□□□□ -1.22
VPS26A-208ENST00000497022 GDPD2Q9HCC8 539 aa7.43□□□□□ -1.22
VPS26A-208ENST00000497022 PRDM6Q9NQX0 595 aa7.43□□□□□ -1.22
VPS26A-208ENST00000497022 CDK2AP1O14519 115 aa7.42□□□□□ -1.22
VPS26A-208ENST00000497022 TMEM132AQ24JP5 1023 aa7.42□□□□□ -1.22
VPS26A-208ENST00000497022 MAP7D1Q3KQU3 841 aa7.42□□□□□ -1.22
VPS26A-208ENST00000497022 SLC4A9Q96Q91 983 aa7.42□□□□□ -1.22
VPS26A-208ENST00000497022 IQSEC3Q9UPP2 1182 aaPredicted RBP7.42□□□□□ -1.22
VPS26A-208ENST00000497022 ADARB2-AS1A8MUL3 147 aa7.41□□□□□ -1.22
VPS26A-208ENST00000497022 SIN3BO75182 1162 aa7.41□□□□□ -1.22
VPS26A-208ENST00000497022 KRTAP4-12Q9BQ66 201 aa7.41□□□□□ -1.22
VPS26A-208ENST00000497022 ABL2P42684 1182 aa7.4□□□□□ -1.22
VPS26A-208ENST00000497022 LCE3BQ5TA77 95 aa7.4□□□□□ -1.22
VPS26A-208ENST00000497022 SYT9Q86SS6 491 aa7.4□□□□□ -1.22
VPS26A-208ENST00000497022 A6NJY4 79 aa7.39□□□□□ -1.23
VPS26A-208ENST00000497022 STRN4Q9NRL3 753 aa7.39□□□□□ -1.23
VPS26A-208ENST00000497022 TMEM229AB2RXF0 380 aa7.38□□□□□ -1.23
VPS26A-208ENST00000497022 VAC14Q08AM6 782 aa7.38□□□□□ -1.23
VPS26A-208ENST00000497022 PRSS36Q5K4E3 855 aa7.38□□□□□ -1.23
VPS26A-208ENST00000497022 BICDL1Q6ZP65 573 aa7.38□□□□□ -1.23
VPS26A-208ENST00000497022 NBPF11Q86T75 865 aa7.38□□□□□ -1.23
VPS26A-208ENST00000497022 TNFRSF25Q93038 417 aa7.38□□□□□ -1.23
VPS26A-208ENST00000497022 CABP1Q9NZU7 370 aa7.38□□□□□ -1.23
VPS26A-208ENST00000497022 COG6Q9Y2V7 657 aa7.38□□□□□ -1.23
VPS26A-208ENST00000497022 GPC6Q9Y625 555 aaPredicted RBP7.38□□□□□ -1.23
VPS26A-208ENST00000497022 M0R082 166 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 246.2 ms