RNA–Protein interactions for RNA: ENST00000497019.6

NTRK1-205, Transcript of neurotrophic receptor tyrosine kinase 1, humanhuman

TSL 2

Gene NTRK1, Length 2,508 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTRK1-205ENST00000497019 SMAP1Q8IYB5 467 aaPredicted RBP22.15■■□□□ 1.14
NTRK1-205ENST00000497019 FAM208AQ9UK61 1670 aaKnown RBP22.15■■□□□ 1.14
NTRK1-205ENST00000497019 LRRC37A3O60309 1634 aa22.15■■□□□ 1.14
NTRK1-205ENST00000497019 PRIMPOLQ96LW4 560 aa22.15■■□□□ 1.14
NTRK1-205ENST00000497019 FMN2Q9NZ56 1722 aa22.15■■□□□ 1.14
NTRK1-205ENST00000497019 PXDNLA1KZ92 1463 aa22.14■■□□□ 1.14
NTRK1-205ENST00000497019 KLHL34Q8N239 644 aa22.14■■□□□ 1.14
NTRK1-205ENST00000497019 GDPD2Q9HCC8 539 aa22.14■■□□□ 1.14
NTRK1-205ENST00000497019 CCDC183Q5T5S1 534 aa22.14■■□□□ 1.13
NTRK1-205ENST00000497019 NECTIN2Q92692 538 aa22.14■■□□□ 1.13
NTRK1-205ENST00000497019 GNAT3A8MTJ3 354 aa22.13■■□□□ 1.13
NTRK1-205ENST00000497019 UBTFL1P0CB47 393 aaPredicted RBP22.13■■□□□ 1.13
NTRK1-205ENST00000497019 IL1RAPL2Q9NP60 686 aa22.13■■□□□ 1.13
NTRK1-205ENST00000497019 DIP2BQ9P265 1576 aa22.13■■□□□ 1.13
NTRK1-205ENST00000497019 RAB11FIP3O75154 756 aa22.13■■□□□ 1.13
NTRK1-205ENST00000497019 GTF2F1P35269 517 aaKnown RBP eCLIP22.13■■□□□ 1.13
NTRK1-205ENST00000497019 TNRQ92752 1358 aa22.12■■□□□ 1.13
NTRK1-205ENST00000497019 LETM1O95202 739 aaPredicted RBP22.12■■□□□ 1.13
NTRK1-205ENST00000497019 FOXD4L6Q3SYB3 417 aaPredicted RBP22.12■■□□□ 1.13
NTRK1-205ENST00000497019 FOXD4L3Q6VB84 417 aaPredicted RBP22.12■■□□□ 1.13
NTRK1-205ENST00000497019 N4BP2Q86UW6 1770 aaPredicted RBP22.12■■□□□ 1.13
NTRK1-205ENST00000497019 AMPHP49418 695 aa22.12■■□□□ 1.13
NTRK1-205ENST00000497019 RAD50Q92878 1312 aa22.11■■□□□ 1.13
NTRK1-205ENST00000497019 SGSM2O43147 1006 aa22.11■■□□□ 1.13
NTRK1-205ENST00000497019 POLA2Q14181 598 aa22.11■■□□□ 1.13
NTRK1-205ENST00000497019 NUTM1Q86Y26 1132 aa22.11■■□□□ 1.13
NTRK1-205ENST00000497019 PI4K2BQ8TCG2 481 aa22.11■■□□□ 1.13
NTRK1-205ENST00000497019 ESF1Q9H501 851 aaKnown RBP22.11■■□□□ 1.13
NTRK1-205ENST00000497019 BABAM1Q9NWV8 329 aa22.11■■□□□ 1.13
NTRK1-205ENST00000497019 CYB5RLQ6IPT4 315 aa22.11■■□□□ 1.13
NTRK1-205ENST00000497019 IL17REQ8NFR9 667 aa22.11■■□□□ 1.13
NTRK1-205ENST00000497019 TTC14Q96N46 770 aa22.11■■□□□ 1.13
NTRK1-205ENST00000497019 PTPRUQ92729 1446 aa22.11■■□□□ 1.13
NTRK1-205ENST00000497019 HMGN5P82970 282 aaKnown RBP22.1■■□□□ 1.13
NTRK1-205ENST00000497019 SPTLC3Q9NUV7 552 aa22.1■■□□□ 1.13
NTRK1-205ENST00000497019 NOLC1Q14978 699 aaKnown RBP eCLIP22.1■■□□□ 1.13
NTRK1-205ENST00000497019 CCDC94Q9BW85 323 aaPredicted RBP22.1■■□□□ 1.13
NTRK1-205ENST00000497019 USP25Q9UHP3 1055 aa22.1■■□□□ 1.13
NTRK1-205ENST00000497019 SNX14Q9Y5W7 946 aa22.1■■□□□ 1.13
NTRK1-205ENST00000497019 CACNA1FO60840 1977 aa22.09■■□□□ 1.13
NTRK1-205ENST00000497019 TAF7Q15545 349 aaPredicted RBP22.09■■□□□ 1.13
NTRK1-205ENST00000497019 PLEKHG1Q9ULL1 1385 aa22.08■■□□□ 1.13
NTRK1-205ENST00000497019 PPP1R42Q7Z4L9 355 aa22.08■■□□□ 1.13
NTRK1-205ENST00000497019 RHPN1Q8TCX5 695 aa22.08■■□□□ 1.13
NTRK1-205ENST00000497019 LSG1Q9H089 658 aaKnown RBP22.08■■□□□ 1.13
NTRK1-205ENST00000497019 SURF6O75683 361 aaKnown RBP22.08■■□□□ 1.12
NTRK1-205ENST00000497019 ADCY5O95622 1261 aa22.08■■□□□ 1.12
NTRK1-205ENST00000497019 ZSCAN22P10073 491 aaPredicted RBP22.08■■□□□ 1.12
NTRK1-205ENST00000497019 UBR1Q8IWV7 1749 aa22.07■■□□□ 1.12
NTRK1-205ENST00000497019 TSPOAP1O95153 1857 aa22.07■■□□□ 1.12
NTRK1-205ENST00000497019 UBE2HP62256 183 aa22.07■■□□□ 1.12
NTRK1-205ENST00000497019 MAP3K5Q99683 1374 aa22.07■■□□□ 1.12
NTRK1-205ENST00000497019 TCHHQ07283 1943 aa22.06■■□□□ 1.12
NTRK1-205ENST00000497019 LTKP29376 864 aa22.06■■□□□ 1.12
NTRK1-205ENST00000497019 DNTTIP2Q5QJE6 756 aaKnown RBP22.06■■□□□ 1.12
NTRK1-205ENST00000497019 CNPY2Q9Y2B0 182 aa22.06■■□□□ 1.12
NTRK1-205ENST00000497019 MAP4K4O95819 1239 aaPredicted RBP22.06■■□□□ 1.12
NTRK1-205ENST00000497019 RASEFQ8IZ41 740 aa22.06■■□□□ 1.12
NTRK1-205ENST00000497019 KIF1BPQ96EK5 621 aa22.06■■□□□ 1.12
NTRK1-205ENST00000497019 PHAXQ9H814 394 aaKnown RBP22.06■■□□□ 1.12
NTRK1-205ENST00000497019 LIMCH1Q9UPQ0 1083 aa22.06■■□□□ 1.12
NTRK1-205ENST00000497019 AK2P54819 239 aa22.05■■□□□ 1.12
NTRK1-205ENST00000497019 RUFY3Q7L099 469 aa22.05■■□□□ 1.12
NTRK1-205ENST00000497019 ZNF830Q96NB3 372 aaPredicted RBP22.05■■□□□ 1.12
NTRK1-205ENST00000497019 FUCA2Q9BTY2 467 aa22.05■■□□□ 1.12
NTRK1-205ENST00000497019 ZNF710Q8N1W2 664 aa22.05■■□□□ 1.12
NTRK1-205ENST00000497019 STX6O43752 255 aa22.04■■□□□ 1.12
NTRK1-205ENST00000497019 KDM4AO75164 1064 aa22.04■■□□□ 1.12
NTRK1-205ENST00000497019 HCLS1P14317 486 aaPredicted RBP22.04■■□□□ 1.12
NTRK1-205ENST00000497019 SYT1P21579 422 aa22.04■■□□□ 1.12
NTRK1-205ENST00000497019 HDGFL1Q5TGJ6 251 aa22.04■■□□□ 1.12
NTRK1-205ENST00000497019 TTC12Q9H892 705 aaPredicted RBP22.04■■□□□ 1.12
NTRK1-205ENST00000497019 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.04■■□□□ 1.12
NTRK1-205ENST00000497019 CNTROBQ8N137 903 aa22.04■■□□□ 1.12
NTRK1-205ENST00000497019 NGDNQ8NEJ9 315 aaKnown RBP22.04■■□□□ 1.12
NTRK1-205ENST00000497019 NWD1Q149M9 1564 aa22.03■■□□□ 1.12
NTRK1-205ENST00000497019 HOXC9P31274 260 aa22.03■■□□□ 1.12
NTRK1-205ENST00000497019 SRGAP3O43295 1099 aa22.02■■□□□ 1.12
NTRK1-205ENST00000497019 USP42Q9H9J4 1324 aaKnown RBP22.02■■□□□ 1.11
NTRK1-205ENST00000497019 F13A1P00488 732 aa22.01■■□□□ 1.11
NTRK1-205ENST00000497019 ATP6V1DQ9Y5K8 247 aa22.01■■□□□ 1.11
NTRK1-205ENST00000497019 PIK3C2AO00443 1686 aa22.01■■□□□ 1.11
NTRK1-205ENST00000497019 SMC3Q9UQE7 1217 aa22.01■■□□□ 1.11
NTRK1-205ENST00000497019 CRYBG1Q9Y4K1 1723 aa22.01■■□□□ 1.11
NTRK1-205ENST00000497019 NBPF7P0C2Y1 421 aaPredicted RBP22■■□□□ 1.11
NTRK1-205ENST00000497019 MPNDQ8N594 471 aa22■■□□□ 1.11
NTRK1-205ENST00000497019 SLC26A8Q96RN1 970 aa22■■□□□ 1.11
NTRK1-205ENST00000497019 NLRP6P59044 892 aa22■■□□□ 1.11
NTRK1-205ENST00000497019 CWC27Q6UX04 472 aaKnown RBP21.99■■□□□ 1.11
NTRK1-205ENST00000497019 LARP6Q9BRS8 491 aaKnown RBP21.99■■□□□ 1.11
NTRK1-205ENST00000497019 HYPKQ9NX55 129 aa21.99■■□□□ 1.11
NTRK1-205ENST00000497019 AMOTL2Q9Y2J4 779 aa21.99■■□□□ 1.11
NTRK1-205ENST00000497019 HSP90AB4PQ58FF6 505 aa21.99■■□□□ 1.11
NTRK1-205ENST00000497019 UTP14CQ5TAP6 766 aaKnown RBP21.99■■□□□ 1.11
NTRK1-205ENST00000497019 JARID2Q92833 1246 aaPredicted RBP21.99■■□□□ 1.11
NTRK1-205ENST00000497019 TTC41PQ6P2S7 1318 aa21.98■■□□□ 1.11
NTRK1-205ENST00000497019 BEND3Q5T5X7 828 aa21.98■■□□□ 1.11
NTRK1-205ENST00000497019 C17orf53Q8N3J3 647 aaPredicted RBP21.98■■□□□ 1.11
NTRK1-205ENST00000497019 SPG7Q9UQ90 795 aa21.98■■□□□ 1.11
NTRK1-205ENST00000497019 KIF3AQ9Y496 699 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms