RNA–Protein interactions for RNA: ENST00000496907.1

HMGCL-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 858 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-206ENST00000496907 HSP90AB1P08238 724 aaKnown RBP8.07□□□□□ -1.12
HMGCL-206ENST00000496907 WDR43Q15061 677 aaKnown RBP eCLIP8.07□□□□□ -1.12
HMGCL-206ENST00000496907 ABHD8Q96I13 439 aa8.07□□□□□ -1.12
HMGCL-206ENST00000496907 TFCP2L1Q9NZI6 479 aa8.07□□□□□ -1.12
HMGCL-206ENST00000496907 COL24A1Q17RW2 1714 aa8.06□□□□□ -1.12
HMGCL-206ENST00000496907 PDE4DIPQ5VU43 2346 aa8.06□□□□□ -1.12
HMGCL-206ENST00000496907 CCDC85CA6NKD9 419 aa8.06□□□□□ -1.12
HMGCL-206ENST00000496907 CCER2I3L3R5 266 aa8.06□□□□□ -1.12
HMGCL-206ENST00000496907 U2AF1L5P0DN76 240 aaPredicted RBP8.06□□□□□ -1.12
HMGCL-206ENST00000496907 U2AF1Q01081 240 aaKnown RBP eCLIP8.06□□□□□ -1.12
HMGCL-206ENST00000496907 SULT6B1Q6IMI4 303 aa8.06□□□□□ -1.12
HMGCL-206ENST00000496907 LRRC4BQ9NT99 713 aa8.06□□□□□ -1.12
HMGCL-206ENST00000496907 PNPLA7Q6ZV29 1317 aa8.05□□□□□ -1.12
HMGCL-206ENST00000496907 VASPP50552 380 aaPredicted RBP8.05□□□□□ -1.12
HMGCL-206ENST00000496907 C16orf71Q8IYS4 520 aaPredicted RBP8.05□□□□□ -1.12
HMGCL-206ENST00000496907 IFNL2Q8IZJ0 200 aa8.05□□□□□ -1.12
HMGCL-206ENST00000496907 NGEFQ8N5V2 710 aa8.05□□□□□ -1.12
HMGCL-206ENST00000496907 GAS2L2Q8NHY3 880 aa8.05□□□□□ -1.12
HMGCL-206ENST00000496907 FBXO3Q9UK99 471 aa8.05□□□□□ -1.12
HMGCL-206ENST00000496907 ANKRD26Q9UPS8 1709 aa8.05□□□□□ -1.12
HMGCL-206ENST00000496907 PCDH11XQ9BZA7 1347 aa8.04□□□□□ -1.12
HMGCL-206ENST00000496907 PCDH11YQ9BZA8 1340 aa8.04□□□□□ -1.12
HMGCL-206ENST00000496907 FOXN1O15353 648 aa8.04□□□□□ -1.12
HMGCL-206ENST00000496907 HTATSF1O43719 755 aaKnown RBP8.04□□□□□ -1.12
HMGCL-206ENST00000496907 KCNQ4P56696 695 aa8.04□□□□□ -1.12
HMGCL-206ENST00000496907 C1orf141Q5JVX7 400 aa8.04□□□□□ -1.12
HMGCL-206ENST00000496907 RBM46Q8TBY0 533 aaKnown RBP8.04□□□□□ -1.12
HMGCL-206ENST00000496907 CFAP44Q96MT7 982 aa8.04□□□□□ -1.12
HMGCL-206ENST00000496907 KDRP35968 1356 aa8.04□□□□□ -1.12
HMGCL-206ENST00000496907 NCAPD2Q15021 1401 aa8.03□□□□□ -1.12
HMGCL-206ENST00000496907 TIE1P35590 1138 aa8.03□□□□□ -1.12
HMGCL-206ENST00000496907 NKX1-1Q15270 411 aaPredicted RBP8.03□□□□□ -1.12
HMGCL-206ENST00000496907 SLC27A3Q5K4L6 730 aa8.03□□□□□ -1.12
HMGCL-206ENST00000496907 MSL1Q68DK7 614 aa8.03□□□□□ -1.12
HMGCL-206ENST00000496907 DDX54Q8TDD1 881 aaKnown RBP8.03□□□□□ -1.12
HMGCL-206ENST00000496907 SYTL4Q96C24 671 aaPredicted RBP8.03□□□□□ -1.12
HMGCL-206ENST00000496907 MRS2Q9HD23 443 aa8.03□□□□□ -1.12
HMGCL-206ENST00000496907 MAPK8IP3Q9UPT6 1336 aa8.03□□□□□ -1.12
HMGCL-206ENST00000496907 HMOX1P09601 288 aa8.02□□□□□ -1.13
HMGCL-206ENST00000496907 LMOD3Q0VAK6 560 aa8.02□□□□□ -1.13
HMGCL-206ENST00000496907 AKAP4Q5JQC9 854 aa8.02□□□□□ -1.13
HMGCL-206ENST00000496907 RUNDC1Q96C34 613 aa8.02□□□□□ -1.13
HMGCL-206ENST00000496907 DCAF5Q96JK2 942 aa8.02□□□□□ -1.13
HMGCL-206ENST00000496907 HS3ST6Q96QI5 342 aa8.02□□□□□ -1.13
HMGCL-206ENST00000496907 FAM208AQ9UK61 1670 aaKnown RBP8.02□□□□□ -1.13
HMGCL-206ENST00000496907 DOT1LQ8TEK3 1739 aa8.01□□□□□ -1.13
HMGCL-206ENST00000496907 ERVV-2B6SEH9 535 aa8.01□□□□□ -1.13
HMGCL-206ENST00000496907 USHBP1Q8N6Y0 703 aa8.01□□□□□ -1.13
HMGCL-206ENST00000496907 PNISRQ8TF01 805 aaKnown RBP8.01□□□□□ -1.13
HMGCL-206ENST00000496907 RTF1Q92541 710 aaKnown RBP8.01□□□□□ -1.13
HMGCL-206ENST00000496907 KIF12Q96FN5 646 aa8.01□□□□□ -1.13
HMGCL-206ENST00000496907 RSPH6AQ9H0K4 717 aa8.01□□□□□ -1.13
HMGCL-206ENST00000496907 LTN1O94822 1766 aa8.01□□□□□ -1.13
HMGCL-206ENST00000496907 MAP2P11137 1827 aaKnown RBP8.01□□□□□ -1.13
HMGCL-206ENST00000496907 LY75O60449 1722 aa8□□□□□ -1.13
HMGCL-206ENST00000496907 GNAT3A8MTJ3 354 aa8□□□□□ -1.13
HMGCL-206ENST00000496907 SNPHO15079 494 aa8□□□□□ -1.13
HMGCL-206ENST00000496907 PHKG2P15735 406 aa8□□□□□ -1.13
HMGCL-206ENST00000496907 PRKAR2BP31323 418 aa8□□□□□ -1.13
HMGCL-206ENST00000496907 EMP3P54852 163 aa8□□□□□ -1.13
HMGCL-206ENST00000496907 CALD1Q05682 793 aaKnown RBP8□□□□□ -1.13
HMGCL-206ENST00000496907 FSTL1Q12841 308 aa8□□□□□ -1.13
HMGCL-206ENST00000496907 ZNF530Q6P9A1 599 aaPredicted RBP8□□□□□ -1.13
HMGCL-206ENST00000496907 IFNLR1Q8IU57 520 aaPredicted RBP8□□□□□ -1.13
HMGCL-206ENST00000496907 RNF166Q96A37 237 aaPredicted RBP8□□□□□ -1.13
HMGCL-206ENST00000496907 ADAMTS8Q9UP79 889 aa8□□□□□ -1.13
HMGCL-206ENST00000496907 TTLL13PA6NNM8 815 aa7.99□□□□□ -1.13
HMGCL-206ENST00000496907 RGS19P49795 217 aa7.99□□□□□ -1.13
HMGCL-206ENST00000496907 COL23A1Q86Y22 540 aaPredicted RBP7.99□□□□□ -1.13
HMGCL-206ENST00000496907 AEBP1Q8IUX7 1158 aa7.99□□□□□ -1.13
HMGCL-206ENST00000496907 SMARCC1Q92922 1105 aaPredicted RBP7.99□□□□□ -1.13
HMGCL-206ENST00000496907 CCNL1Q9UK58 526 aaPredicted RBP7.99□□□□□ -1.13
HMGCL-206ENST00000496907 CD2APQ9Y5K6 639 aa7.99□□□□□ -1.13
HMGCL-206ENST00000496907 COL3A1P02461 1466 aaPredicted RBP7.99□□□□□ -1.13
HMGCL-206ENST00000496907 CYP27B1O15528 508 aa7.98□□□□□ -1.13
HMGCL-206ENST00000496907 LBX1P52954 281 aa7.98□□□□□ -1.13
HMGCL-206ENST00000496907 NFE2L2Q16236 605 aa7.98□□□□□ -1.13
HMGCL-206ENST00000496907 MTHFSDQ2M296 383 aaKnown RBP7.98□□□□□ -1.13
HMGCL-206ENST00000496907 PLEKHF1Q96S99 279 aa7.98□□□□□ -1.13
HMGCL-206ENST00000496907 CHMP4AQ9BY43 222 aa7.98□□□□□ -1.13
HMGCL-206ENST00000496907 PRDM10Q9NQV6 1147 aa7.98□□□□□ -1.13
HMGCL-206ENST00000496907 BABAM1Q9NWV8 329 aa7.98□□□□□ -1.13
HMGCL-206ENST00000496907 C5P01031 1676 aa7.98□□□□□ -1.13
HMGCL-206ENST00000496907 FAM205CA6NFA0 338 aa7.97□□□□□ -1.13
HMGCL-206ENST00000496907 PRIM1P49642 420 aaKnown RBP7.97□□□□□ -1.13
HMGCL-206ENST00000496907 CABP4P57796 275 aa7.97□□□□□ -1.13
HMGCL-206ENST00000496907 TEFQ10587 303 aa7.97□□□□□ -1.13
HMGCL-206ENST00000496907 IER5LQ5T953 404 aa7.97□□□□□ -1.13
HMGCL-206ENST00000496907 TMOD3Q9NYL9 352 aa7.97□□□□□ -1.13
HMGCL-206ENST00000496907 MKRN1Q9UHC7 482 aaKnown RBP7.97□□□□□ -1.13
HMGCL-206ENST00000496907 RNMTO43148 476 aaKnown RBP7.96□□□□□ -1.14
HMGCL-206ENST00000496907 TMPOP42166 694 aaKnown RBP7.96□□□□□ -1.14
HMGCL-206ENST00000496907 RIPK4P57078 832 aa7.96□□□□□ -1.14
HMGCL-206ENST00000496907 CCDC27Q2M243 656 aa7.96□□□□□ -1.14
HMGCL-206ENST00000496907 PHACTR3Q96KR7 559 aa7.96□□□□□ -1.14
HMGCL-206ENST00000496907 TSPYL2Q9H2G4 693 aaPredicted RBP7.96□□□□□ -1.14
HMGCL-206ENST00000496907 MEGF6O75095 1541 aa7.96□□□□□ -1.14
HMGCL-206ENST00000496907 CTCFP49711 727 aaPredicted RBP7.95□□□□□ -1.14
HMGCL-206ENST00000496907 TAF7Q15545 349 aaPredicted RBP7.95□□□□□ -1.14
HMGCL-206ENST00000496907 FAM9BQ8IZU0 186 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms