RNA–Protein interactions for RNA: ENST00000496616.5

PPEF1-209, Transcript of protein phosphatase with EF-hand domain 1, humanhuman

TSL 3

Gene PPEF1, Length 906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPEF1-209ENST00000496616 DYNC1I1O14576 645 aa9.56□□□□□ -0.88
PPEF1-209ENST00000496616 PPP1R12AO14974 1030 aaPredicted RBP9.56□□□□□ -0.88
PPEF1-209ENST00000496616 COPB2P35606 906 aa9.56□□□□□ -0.88
PPEF1-209ENST00000496616 FOXD4Q12950 439 aaPredicted RBP9.56□□□□□ -0.88
PPEF1-209ENST00000496616 POTEHQ6S545 545 aa9.56□□□□□ -0.88
PPEF1-209ENST00000496616 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.56□□□□□ -0.88
PPEF1-209ENST00000496616 NWD2Q9ULI1 1742 aa9.56□□□□□ -0.88
PPEF1-209ENST00000496616 AFF2P51816 1311 aa9.56□□□□□ -0.88
PPEF1-209ENST00000496616 CD163L1Q9NR16 1453 aa9.55□□□□□ -0.88
PPEF1-209ENST00000496616 IPO8O15397 1037 aaKnown RBP9.55□□□□□ -0.88
PPEF1-209ENST00000496616 SETSIPP0DME0 302 aa9.55□□□□□ -0.88
PPEF1-209ENST00000496616 PSMC1P62191 440 aaKnown RBP9.55□□□□□ -0.88
PPEF1-209ENST00000496616 PSME1Q06323 249 aa9.55□□□□□ -0.88
PPEF1-209ENST00000496616 SWT1Q5T5J6 900 aaKnown RBP9.55□□□□□ -0.88
PPEF1-209ENST00000496616 CABLES1Q8TDN4 633 aa9.55□□□□□ -0.88
PPEF1-209ENST00000496616 FRAT1Q92837 279 aaPredicted RBP9.55□□□□□ -0.88
PPEF1-209ENST00000496616 NUCKS1Q9H1E3 243 aaKnown RBP9.55□□□□□ -0.88
PPEF1-209ENST00000496616 PAXBP1Q9Y5B6 917 aa9.55□□□□□ -0.88
PPEF1-209ENST00000496616 SLIT2O94813 1529 aa9.55□□□□□ -0.88
PPEF1-209ENST00000496616 EPB41L2O43491 1005 aaKnown RBP9.54□□□□□ -0.88
PPEF1-209ENST00000496616 ADAMTS2O95450 1211 aa9.54□□□□□ -0.88
PPEF1-209ENST00000496616 HOXD11P31277 338 aaPredicted RBP9.54□□□□□ -0.88
PPEF1-209ENST00000496616 SRPK2P78362 688 aaKnown RBP9.54□□□□□ -0.88
PPEF1-209ENST00000496616 PUS10Q3MIT2 529 aaKnown RBP9.54□□□□□ -0.88
PPEF1-209ENST00000496616 HSP90AB2PQ58FF8 381 aa9.54□□□□□ -0.88
PPEF1-209ENST00000496616 FNBP4Q8N3X1 1017 aaPredicted RBP9.54□□□□□ -0.88
PPEF1-209ENST00000496616 MPNDQ8N594 471 aa9.54□□□□□ -0.88
PPEF1-209ENST00000496616 NGDNQ8NEJ9 315 aaKnown RBP9.54□□□□□ -0.88
PPEF1-209ENST00000496616 ERCC4Q92889 916 aaPredicted RBP9.54□□□□□ -0.88
PPEF1-209ENST00000496616 SPINK5Q9NQ38 1064 aaPredicted RBP9.54□□□□□ -0.88
PPEF1-209ENST00000496616 PPP4R2Q9NY27 417 aa9.54□□□□□ -0.88
PPEF1-209ENST00000496616 CABP1Q9NZU7 370 aa9.54□□□□□ -0.88
PPEF1-209ENST00000496616 CPSF1Q10570 1443 aaKnown RBP9.54□□□□□ -0.88
PPEF1-209ENST00000496616 MYOM1P52179 1685 aa9.54□□□□□ -0.88
PPEF1-209ENST00000496616 USP54Q70EL1 1684 aa9.54□□□□□ -0.88
PPEF1-209ENST00000496616 EVC2Q86UK5 1308 aa9.54□□□□□ -0.88
PPEF1-209ENST00000496616 EP400Q96L91 3159 aa9.53□□□□□ -0.88
PPEF1-209ENST00000496616 ARHGEF10O15013 1369 aa9.53□□□□□ -0.88
PPEF1-209ENST00000496616 RGPD5Q99666 1765 aa9.53□□□□□ -0.88
PPEF1-209ENST00000496616 ST20-MTHFSA0A0A6YYL1 179 aa9.53□□□□□ -0.88
PPEF1-209ENST00000496616 TULP2O00295 520 aa9.53□□□□□ -0.88
PPEF1-209ENST00000496616 FAM200BP0CF97 657 aa9.53□□□□□ -0.88
PPEF1-209ENST00000496616 ZFYVE27Q5T4F4 411 aa9.53□□□□□ -0.88
PPEF1-209ENST00000496616 ZNF772Q68DY9 489 aaPredicted RBP9.53□□□□□ -0.88
PPEF1-209ENST00000496616 SMC5Q8IY18 1101 aa9.53□□□□□ -0.88
PPEF1-209ENST00000496616 JMYQ8N9B5 988 aa9.53□□□□□ -0.88
PPEF1-209ENST00000496616 TIGD1Q96MW7 591 aa9.53□□□□□ -0.88
PPEF1-209ENST00000496616 C8orf37Q96NL8 207 aa9.53□□□□□ -0.88
PPEF1-209ENST00000496616 FAM13BQ9NYF5 915 aa9.53□□□□□ -0.88
PPEF1-209ENST00000496616 BRWD3Q6RI45 1802 aa9.53□□□□□ -0.88
PPEF1-209ENST00000496616 USP6P35125 1406 aa9.53□□□□□ -0.88
PPEF1-209ENST00000496616 COL18A1P39060 1754 aa9.52□□□□□ -0.88
PPEF1-209ENST00000496616 COL14A1Q05707 1796 aaKnown RBP9.52□□□□□ -0.88
PPEF1-209ENST00000496616 ANKRD62A6NC57 917 aa9.52□□□□□ -0.89
PPEF1-209ENST00000496616 NPM3O75607 178 aaKnown RBP9.52□□□□□ -0.89
PPEF1-209ENST00000496616 ATRNO75882 1429 aa9.52□□□□□ -0.89
PPEF1-209ENST00000496616 GLI3P10071 1580 aa9.52□□□□□ -0.89
PPEF1-209ENST00000496616 TDO2P48775 406 aa9.52□□□□□ -0.89
PPEF1-209ENST00000496616 TBC1D10BQ4KMP7 808 aaPredicted RBP9.52□□□□□ -0.89
PPEF1-209ENST00000496616 MEX3CQ5U5Q3 659 aaKnown RBP9.52□□□□□ -0.89
PPEF1-209ENST00000496616 KLHL10Q6JEL2 608 aa9.52□□□□□ -0.89
PPEF1-209ENST00000496616 FBXW7Q969H0 707 aa9.52□□□□□ -0.89
PPEF1-209ENST00000496616 RANBP17Q9H2T7 1088 aaKnown RBP9.52□□□□□ -0.89
PPEF1-209ENST00000496616 CALCOCO1Q9P1Z2 691 aa9.52□□□□□ -0.89
PPEF1-209ENST00000496616 LMO7Q8WWI1 1683 aa9.51□□□□□ -0.89
PPEF1-209ENST00000496616 USP47Q96K76 1375 aa9.51□□□□□ -0.89
PPEF1-209ENST00000496616 EIF3JO75822 258 aaKnown RBP9.51□□□□□ -0.89
PPEF1-209ENST00000496616 KIAA2012Q0VF49 1180 aa9.51□□□□□ -0.89
PPEF1-209ENST00000496616 ZC3H12AQ5D1E8 599 aaKnown RBP9.51□□□□□ -0.89
PPEF1-209ENST00000496616 GET4Q7L5D6 327 aaPredicted RBP9.51□□□□□ -0.89
PPEF1-209ENST00000496616 NGLY1Q96IV0 654 aa9.51□□□□□ -0.89
PPEF1-209ENST00000496616 TMX4Q9H1E5 349 aaPredicted RBP9.51□□□□□ -0.89
PPEF1-209ENST00000496616 KDM4CQ9H3R0 1056 aa9.51□□□□□ -0.89
PPEF1-209ENST00000496616 METTL14Q9HCE5 456 aaKnown RBP9.51□□□□□ -0.89
PPEF1-209ENST00000496616 CCDC196A0A1B0GTZ2 297 aa9.5□□□□□ -0.89
PPEF1-209ENST00000496616 FAM83GA6ND36 823 aa9.5□□□□□ -0.89
PPEF1-209ENST00000496616 RIOK3O14730 519 aaKnown RBP9.5□□□□□ -0.89
PPEF1-209ENST00000496616 SH3BP5O60239 455 aa9.5□□□□□ -0.89
PPEF1-209ENST00000496616 SARNPP82979 210 aaKnown RBP9.5□□□□□ -0.89
PPEF1-209ENST00000496616 CLEC4GQ6UXB4 293 aa9.5□□□□□ -0.89
PPEF1-209ENST00000496616 CWC25Q9NXE8 425 aaPredicted RBP9.5□□□□□ -0.89
PPEF1-209ENST00000496616 CDK12Q9NYV4 1490 aaPredicted RBP9.5□□□□□ -0.89
PPEF1-209ENST00000496616 SLIT3O75094 1523 aa9.5□□□□□ -0.89
PPEF1-209ENST00000496616 USP19O94966 1318 aa9.5□□□□□ -0.89
PPEF1-209ENST00000496616 ATAD2Q6PL18 1390 aa9.5□□□□□ -0.89
PPEF1-209ENST00000496616 PPFIA4O75335 1185 aa9.49□□□□□ -0.89
PPEF1-209ENST00000496616 TPM3P06753 285 aa9.49□□□□□ -0.89
PPEF1-209ENST00000496616 C11orf91Q3C1V1 193 aa9.49□□□□□ -0.89
PPEF1-209ENST00000496616 CT47A1Q5JQC4 288 aaPredicted RBP9.49□□□□□ -0.89
PPEF1-209ENST00000496616 NUTM2GQ5VZR2 741 aa9.49□□□□□ -0.89
PPEF1-209ENST00000496616 LMOD2Q6P5Q4 547 aa9.49□□□□□ -0.89
PPEF1-209ENST00000496616 QTRT2Q9H974 415 aaKnown RBP9.49□□□□□ -0.89
PPEF1-209ENST00000496616 USP21Q9UK80 565 aa9.49□□□□□ -0.89
PPEF1-209ENST00000496616 BRD4O60885 1362 aaPredicted RBP9.49□□□□□ -0.89
PPEF1-209ENST00000496616 RGS12O14924 1447 aa9.48□□□□□ -0.89
PPEF1-209ENST00000496616 CCP110O43303 1012 aa9.48□□□□□ -0.89
PPEF1-209ENST00000496616 RHBDL3P58872 404 aa9.48□□□□□ -0.89
PPEF1-209ENST00000496616 SF3B2Q13435 895 aaKnown RBP9.48□□□□□ -0.89
PPEF1-209ENST00000496616 CCDC82Q8N4S0 544 aa9.48□□□□□ -0.89
PPEF1-209ENST00000496616 TEX13AQ9BXU3 409 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms