RNA–Protein interactions for RNA: ENST00000496530.1

SMARCD3-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-215ENST00000496530 DNAJC10Q8IXB1 793 aa10.64□□□□□ -0.71
SMARCD3-215ENST00000496530 CCDC87Q9NVE4 849 aa10.64□□□□□ -0.71
SMARCD3-215ENST00000496530 HEG1Q9ULI3 1381 aa10.64□□□□□ -0.71
SMARCD3-215ENST00000496530 KLHL34Q8N239 644 aa10.63□□□□□ -0.71
SMARCD3-215ENST00000496530 SLC4A9Q96Q91 983 aa10.63□□□□□ -0.71
SMARCD3-215ENST00000496530 A0A087WZG4 1122 aa10.62□□□□□ -0.71
SMARCD3-215ENST00000496530 ZPR1O75312 459 aa10.62□□□□□ -0.71
SMARCD3-215ENST00000496530 SNRPA1P09661 255 aaKnown RBP10.62□□□□□ -0.71
SMARCD3-215ENST00000496530 PTGER2P43116 358 aa10.62□□□□□ -0.71
SMARCD3-215ENST00000496530 CALD1Q05682 793 aaKnown RBP10.62□□□□□ -0.71
SMARCD3-215ENST00000496530 NLGN1Q8N2Q7 840 aa10.62□□□□□ -0.71
SMARCD3-215ENST00000496530 ZNF496Q96IT1 587 aaPredicted RBP10.62□□□□□ -0.71
SMARCD3-215ENST00000496530 BABAM1Q9NWV8 329 aa10.62□□□□□ -0.71
SMARCD3-215ENST00000496530 CYP19A1P11511 503 aaPredicted RBP10.61□□□□□ -0.71
SMARCD3-215ENST00000496530 MSL1Q68DK7 614 aa10.61□□□□□ -0.71
SMARCD3-215ENST00000496530 ARHGEF1Q92888 912 aaKnown RBP10.61□□□□□ -0.71
SMARCD3-215ENST00000496530 THUMPD2Q9BTF0 503 aaKnown RBP10.61□□□□□ -0.71
SMARCD3-215ENST00000496530 TSPYL4Q9UJ04 414 aa10.61□□□□□ -0.71
SMARCD3-215ENST00000496530 CANXP27824 592 aaKnown RBP10.6□□□□□ -0.71
SMARCD3-215ENST00000496530 WWC1Q8IX03 1113 aa10.6□□□□□ -0.71
SMARCD3-215ENST00000496530 MIS18AQ9NYP9 233 aa10.6□□□□□ -0.71
SMARCD3-215ENST00000496530 ZNF330Q9Y3S2 320 aaPredicted RBP10.6□□□□□ -0.71
SMARCD3-215ENST00000496530 COL24A1Q17RW2 1714 aa10.6□□□□□ -0.71
SMARCD3-215ENST00000496530 COL15A1P39059 1388 aa10.6□□□□□ -0.71
SMARCD3-215ENST00000496530 KDM3BQ7LBC6 1761 aa10.6□□□□□ -0.71
SMARCD3-215ENST00000496530 GOLGA2Q08379 1002 aa10.59□□□□□ -0.71
SMARCD3-215ENST00000496530 INTS5Q6P9B9 1019 aaKnown RBP10.59□□□□□ -0.71
SMARCD3-215ENST00000496530 NGEFQ8N5V2 710 aa10.59□□□□□ -0.71
SMARCD3-215ENST00000496530 SGIP1Q9BQI5 828 aa10.59□□□□□ -0.71
SMARCD3-215ENST00000496530 FHDC1Q9C0D6 1143 aaPredicted RBP10.59□□□□□ -0.71
SMARCD3-215ENST00000496530 TRIM35Q9UPQ4 493 aa10.59□□□□□ -0.71
SMARCD3-215ENST00000496530 ZBTB1Q9Y2K1 713 aa10.59□□□□□ -0.71
SMARCD3-215ENST00000496530 PARP3Q9Y6F1 533 aa10.59□□□□□ -0.71
SMARCD3-215ENST00000496530 SOS1Q07889 1333 aaPredicted RBP10.58□□□□□ -0.71
SMARCD3-215ENST00000496530 C4AP0C0L4 1744 aa10.58□□□□□ -0.72
SMARCD3-215ENST00000496530 MYH14Q7Z406 1995 aaKnown RBP10.58□□□□□ -0.72
SMARCD3-215ENST00000496530 LAMB4A4D0S4 1761 aa10.58□□□□□ -0.72
SMARCD3-215ENST00000496530 KCNQ3O43525 872 aa10.58□□□□□ -0.72
SMARCD3-215ENST00000496530 IL6STP40189 918 aaPredicted RBP10.58□□□□□ -0.72
SMARCD3-215ENST00000496530 WDR63Q8IWG1 891 aa10.58□□□□□ -0.72
SMARCD3-215ENST00000496530 CDCA7LQ96GN5 454 aa10.58□□□□□ -0.72
SMARCD3-215ENST00000496530 SYT17Q9BSW7 474 aa10.58□□□□□ -0.72
SMARCD3-215ENST00000496530 USP42Q9H9J4 1324 aaKnown RBP10.58□□□□□ -0.72
SMARCD3-215ENST00000496530 NARFQ9UHQ1 456 aa10.57□□□□□ -0.72
SMARCD3-215ENST00000496530 A1BGP04217 495 aa10.56□□□□□ -0.72
SMARCD3-215ENST00000496530 CENPBP07199 599 aaPredicted RBP10.56□□□□□ -0.72
SMARCD3-215ENST00000496530 MMP10P09238 476 aa10.56□□□□□ -0.72
SMARCD3-215ENST00000496530 GYS1P13807 737 aa10.56□□□□□ -0.72
SMARCD3-215ENST00000496530 EIF4A1P60842 406 aaKnown RBP10.56□□□□□ -0.72
SMARCD3-215ENST00000496530 GNAI1P63096 354 aa10.56□□□□□ -0.72
SMARCD3-215ENST00000496530 USPL1Q5W0Q7 1092 aa10.56□□□□□ -0.72
SMARCD3-215ENST00000496530 SMIM5Q71RC9 77 aa10.56□□□□□ -0.72
SMARCD3-215ENST00000496530 AMIGO3Q86WK7 504 aa10.56□□□□□ -0.72
SMARCD3-215ENST00000496530 CHMP4AQ9BY43 222 aa10.56□□□□□ -0.72
SMARCD3-215ENST00000496530 ZNF652Q9Y2D9 606 aa10.56□□□□□ -0.72
SMARCD3-215ENST00000496530 CD2APQ9Y5K6 639 aa10.56□□□□□ -0.72
SMARCD3-215ENST00000496530 USP16Q9Y5T5 823 aa10.56□□□□□ -0.72
SMARCD3-215ENST00000496530 NPHP1O15259 732 aa10.55□□□□□ -0.72
SMARCD3-215ENST00000496530 GIGYF1O75420 1035 aaPredicted RBP10.55□□□□□ -0.72
SMARCD3-215ENST00000496530 EIF5P55010 431 aaKnown RBP10.55□□□□□ -0.72
SMARCD3-215ENST00000496530 CCDC27Q2M243 656 aa10.55□□□□□ -0.72
SMARCD3-215ENST00000496530 DZIP3Q86Y13 1208 aaKnown RBP10.55□□□□□ -0.72
SMARCD3-215ENST00000496530 CFAP44Q96MT7 982 aa10.55□□□□□ -0.72
SMARCD3-215ENST00000496530 ERBB4Q15303 1308 aa10.55□□□□□ -0.72
SMARCD3-215ENST00000496530 ELL2O00472 640 aaPredicted RBP10.54□□□□□ -0.72
SMARCD3-215ENST00000496530 NCBP3Q53F19 620 aaKnown RBP10.54□□□□□ -0.72
SMARCD3-215ENST00000496530 MYH16Q9H6N6 1097 aa10.54□□□□□ -0.72
SMARCD3-215ENST00000496530 IFT57Q9NWB7 429 aa10.54□□□□□ -0.72
SMARCD3-215ENST00000496530 SRP68Q9UHB9 627 aaKnown RBP10.54□□□□□ -0.72
SMARCD3-215ENST00000496530 ZBED9Q6R2W3 1325 aa10.54□□□□□ -0.72
SMARCD3-215ENST00000496530 PRAMEF22A3QJZ6 481 aa10.53□□□□□ -0.72
SMARCD3-215ENST00000496530 E9PSI1 815 aa10.53□□□□□ -0.72
SMARCD3-215ENST00000496530 CHL1O00533 1208 aa10.53□□□□□ -0.72
SMARCD3-215ENST00000496530 EIF2S2P20042 333 aaKnown RBP10.53□□□□□ -0.72
SMARCD3-215ENST00000496530 SLFN5Q08AF3 891 aa10.53□□□□□ -0.72
SMARCD3-215ENST00000496530 FKBP8Q14318 412 aa10.53□□□□□ -0.72
SMARCD3-215ENST00000496530 GPR162Q16538 588 aa10.53□□□□□ -0.72
SMARCD3-215ENST00000496530 KIF6Q6ZMV9 814 aa10.53□□□□□ -0.72
SMARCD3-215ENST00000496530 PELP1Q8IZL8 1130 aaKnown RBP10.53□□□□□ -0.72
SMARCD3-215ENST00000496530 TSR2Q969E8 191 aaKnown RBP10.53□□□□□ -0.72
SMARCD3-215ENST00000496530 RNF39Q9H2S5 420 aa10.53□□□□□ -0.72
SMARCD3-215ENST00000496530 SPINK5Q9NQ38 1064 aaPredicted RBP10.53□□□□□ -0.72
SMARCD3-215ENST00000496530 HOXB7P09629 217 aa10.52□□□□□ -0.73
SMARCD3-215ENST00000496530 TGFB2P61812 414 aa10.52□□□□□ -0.73
SMARCD3-215ENST00000496530 CLEC4GQ6UXB4 293 aa10.52□□□□□ -0.73
SMARCD3-215ENST00000496530 TBC1D2BQ9UPU7 963 aa10.52□□□□□ -0.73
SMARCD3-215ENST00000496530 SCN7AQ01118 1682 aa10.52□□□□□ -0.73
SMARCD3-215ENST00000496530 RGL2O15211 777 aa10.51□□□□□ -0.73
SMARCD3-215ENST00000496530 MYL6BP14649 208 aa10.51□□□□□ -0.73
SMARCD3-215ENST00000496530 BICDL1Q6ZP65 573 aa10.51□□□□□ -0.73
SMARCD3-215ENST00000496530 SETDB2Q96T68 719 aa10.51□□□□□ -0.73
SMARCD3-215ENST00000496530 BCORQ6W2J9 1755 aa10.51□□□□□ -0.73
SMARCD3-215ENST00000496530 GRIN3BO60391 1043 aa10.5□□□□□ -0.73
SMARCD3-215ENST00000496530 SERPINB2P05120 415 aa10.5□□□□□ -0.73
SMARCD3-215ENST00000496530 TM4SF1P30408 202 aa10.5□□□□□ -0.73
SMARCD3-215ENST00000496530 PIP4K2AP48426 406 aaPredicted RBP10.5□□□□□ -0.73
SMARCD3-215ENST00000496530 ST5P78524 1137 aa10.5□□□□□ -0.73
SMARCD3-215ENST00000496530 EXOSC9Q06265 439 aaKnown RBP10.5□□□□□ -0.73
SMARCD3-215ENST00000496530 HDGFL1Q5TGJ6 251 aa10.5□□□□□ -0.73
SMARCD3-215ENST00000496530 MBIPQ9NS73 344 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms