RNA–Protein interactions for RNA: ENST00000496514.5

PDE6B-212, Transcript of phosphodiesterase 6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDE6B, Length 3,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-212ENST00000496514 ATF3P18847 181 aa15.11■□□□□ 0.01
PDE6B-212ENST00000496514 KLHDC4Q8TBB5 520 aa15.11■□□□□ 0.01
PDE6B-212ENST00000496514 UPF3BQ9BZI7 483 aaKnown RBP15.11■□□□□ 0.01
PDE6B-212ENST00000496514 NFATC2IPQ8NCF5 419 aa15.11■□□□□ 0.01
PDE6B-212ENST00000496514 SNX21Q969T3 373 aa15.11■□□□□ 0.01
PDE6B-212ENST00000496514 PANK2Q9BZ23 570 aa15.11■□□□□ 0.01
PDE6B-212ENST00000496514 SIL1Q9H173 461 aa15.11■□□□□ 0.01
PDE6B-212ENST00000496514 C9orf78Q9NZ63 289 aaPredicted RBP15.11■□□□□ 0.01
PDE6B-212ENST00000496514 DDX54Q8TDD1 881 aaKnown RBP15.1■□□□□ 0.01
PDE6B-212ENST00000496514 CCDC9Q9Y3X0 531 aaKnown RBP15.1■□□□□ 0.01
PDE6B-212ENST00000496514 NFAT5O94916 1531 aa15.1■□□□□ 0.01
PDE6B-212ENST00000496514 CEMIPQ8WUJ3 1361 aa15.1■□□□□ 0.01
PDE6B-212ENST00000496514 BEND3Q5T5X7 828 aa15.1■□□□□ 0.01
PDE6B-212ENST00000496514 ERC2O15083 957 aa15.09■□□□□ 0.01
PDE6B-212ENST00000496514 NEK4P51957 841 aa15.09■□□□□ 0.01
PDE6B-212ENST00000496514 RBM10P98175 930 aaKnown RBP15.09■□□□□ 0.01
PDE6B-212ENST00000496514 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.09■□□□□ 0.01
PDE6B-212ENST00000496514 RAPGEF4Q8WZA2 1011 aa15.09■□□□□ 0.01
PDE6B-212ENST00000496514 GIGYF1O75420 1035 aaPredicted RBP15.09■□□□□ 0.01
PDE6B-212ENST00000496514 C19orf44Q9H6X5 657 aa15.09■□□□□ 0.01
PDE6B-212ENST00000496514 PDIA4P13667 645 aaKnown RBP15.08■□□□□ 0.01
PDE6B-212ENST00000496514 RHPN1Q8TCX5 695 aa15.08■□□□□ 0.01
PDE6B-212ENST00000496514 TMEM94Q12767 1356 aa15.08■□□□□ 0
PDE6B-212ENST00000496514 ADCY9O60503 1353 aa15.08■□□□□ 0
PDE6B-212ENST00000496514 IBTKQ9P2D0 1353 aaPredicted RBP15.08■□□□□ 0
PDE6B-212ENST00000496514 ERBB3P21860 1342 aa15.07■□□□□ 0
PDE6B-212ENST00000496514 NCLP19338 710 aaKnown RBP15.07■□□□□ 0
PDE6B-212ENST00000496514 DDIT3P35638 169 aa15.07■□□□□ 0
PDE6B-212ENST00000496514 RABEP1Q15276 862 aa15.07■□□□□ 0
PDE6B-212ENST00000496514 CHMLP26374 656 aa15.06■□□□□ 0
PDE6B-212ENST00000496514 ESYT1Q9BSJ8 1104 aa15.06■□□□□ 0
PDE6B-212ENST00000496514 FAM208AQ9UK61 1670 aaKnown RBP15.06■□□□□ 0
PDE6B-212ENST00000496514 REC8O95072 547 aa15.06■□□□□ 0
PDE6B-212ENST00000496514 DBF4Q9UBU7 674 aaPredicted RBP15.06■□□□□ 0
PDE6B-212ENST00000496514 SPG7Q9UQ90 795 aa15.05■□□□□ 0
PDE6B-212ENST00000496514 RAB3GAP1Q15042 981 aa15.05■□□□□ -0
PDE6B-212ENST00000496514 AMOTQ4VCS5 1084 aa15.05■□□□□ -0
PDE6B-212ENST00000496514 CWC27Q6UX04 472 aaKnown RBP15.05■□□□□ -0
PDE6B-212ENST00000496514 SSH3Q8TE77 659 aa15.05■□□□□ -0
PDE6B-212ENST00000496514 USP16Q9Y5T5 823 aa15.05■□□□□ -0
PDE6B-212ENST00000496514 C1orf167Q5SNV9 1468 aa15.05■□□□□ -0
PDE6B-212ENST00000496514 SALL3Q9BXA9 1300 aa15.05■□□□□ -0
PDE6B-212ENST00000496514 CPA1P15085 419 aa15.05■□□□□ -0
PDE6B-212ENST00000496514 MCTP1Q6DN14 999 aa15.05■□□□□ -0
PDE6B-212ENST00000496514 ZNF496Q96IT1 587 aaPredicted RBP15.05■□□□□ -0
PDE6B-212ENST00000496514 RIC3Q7Z5B4 369 aa15.04■□□□□ -0
PDE6B-212ENST00000496514 CCDC8Q9H0W5 538 aaPredicted RBP15.04■□□□□ -0
PDE6B-212ENST00000496514 ATP5J2-PTCD1G3V325 749 aa15.04■□□□□ -0
PDE6B-212ENST00000496514 PTCD1O75127 700 aaKnown RBP15.04■□□□□ -0
PDE6B-212ENST00000496514 FGD1P98174 961 aa15.04■□□□□ -0
PDE6B-212ENST00000496514 SUCLG2Q96I99 432 aa15.04■□□□□ -0
PDE6B-212ENST00000496514 ZNF330Q9Y3S2 320 aaPredicted RBP15.04■□□□□ -0
PDE6B-212ENST00000496514 NDUFB9Q9Y6M9 179 aa15.04■□□□□ -0
PDE6B-212ENST00000496514 LRRC37A3O60309 1634 aa15.03■□□□□ -0
PDE6B-212ENST00000496514 RGPD5Q99666 1765 aa15.03■□□□□ -0
PDE6B-212ENST00000496514 NCOA3Q9Y6Q9 1424 aa15.03■□□□□ -0
PDE6B-212ENST00000496514 COPS6Q7L5N1 327 aa15.03■□□□□ -0
PDE6B-212ENST00000496514 XAGE3Q8WTP9 111 aa15.03■□□□□ -0
PDE6B-212ENST00000496514 GOLGA6L3A6NEY3 463 aa15.02■□□□□ -0
PDE6B-212ENST00000496514 ST18O60284 1047 aa15.02■□□□□ -0
PDE6B-212ENST00000496514 XRCC6P12956 609 aaKnown RBP eCLIP15.02■□□□□ -0
PDE6B-212ENST00000496514 TATP17735 454 aaPredicted RBP15.02■□□□□ -0
PDE6B-212ENST00000496514 ZNF790Q6PG37 636 aa15.02■□□□□ -0
PDE6B-212ENST00000496514 MYD88Q99836 296 aa15.02■□□□□ -0
PDE6B-212ENST00000496514 OSBPL3Q9H4L5 887 aa15.02■□□□□ -0
PDE6B-212ENST00000496514 BICC1Q9H694 974 aaKnown RBP15.02■□□□□ -0
PDE6B-212ENST00000496514 STRN4Q9NRL3 753 aa15.02□□□□□ -0.01
PDE6B-212ENST00000496514 TLR7Q9NYK1 1049 aaKnown RBP15.02□□□□□ -0.01
PDE6B-212ENST00000496514 CYP27B1O15528 508 aa15.01□□□□□ -0.01
PDE6B-212ENST00000496514 KSR2Q6VAB6 950 aa15.01□□□□□ -0.01
PDE6B-212ENST00000496514 GAS2L3Q86XJ1 694 aa15.01□□□□□ -0.01
PDE6B-212ENST00000496514 PI4K2BQ8TCG2 481 aa15.01□□□□□ -0.01
PDE6B-212ENST00000496514 GBP4Q96PP9 640 aa15.01□□□□□ -0.01
PDE6B-212ENST00000496514 POLA2Q14181 598 aa15□□□□□ -0.01
PDE6B-212ENST00000496514 AACSQ86V21 672 aa15□□□□□ -0.01
PDE6B-212ENST00000496514 NPHP3Q7Z494 1330 aa15□□□□□ -0.01
PDE6B-212ENST00000496514 PHKG2P15735 406 aa15□□□□□ -0.01
PDE6B-212ENST00000496514 EPHA10Q5JZY3 1008 aa15□□□□□ -0.01
PDE6B-212ENST00000496514 EDC3Q96F86 508 aaKnown RBP15□□□□□ -0.01
PDE6B-212ENST00000496514 DDX11L8A8MPP1 907 aa15□□□□□ -0.01
PDE6B-212ENST00000496514 BAG4O95429 457 aaKnown RBP15□□□□□ -0.01
PDE6B-212ENST00000496514 PDIA6Q15084 440 aa15□□□□□ -0.01
PDE6B-212ENST00000496514 KIF1BPQ96EK5 621 aa15□□□□□ -0.01
PDE6B-212ENST00000496514 KAZALD1Q96I82 304 aa15□□□□□ -0.01
PDE6B-212ENST00000496514 TMX3Q96JJ7 454 aa15□□□□□ -0.01
PDE6B-212ENST00000496514 BABAM1Q9NWV8 329 aa15□□□□□ -0.01
PDE6B-212ENST00000496514 CHGBP05060 677 aa14.99□□□□□ -0.01
PDE6B-212ENST00000496514 IGKV5-2P06315 115 aa14.99□□□□□ -0.01
PDE6B-212ENST00000496514 SLC52A2Q9HAB3 445 aa14.99□□□□□ -0.01
PDE6B-212ENST00000496514 MEGF6O75095 1541 aa14.99□□□□□ -0.01
PDE6B-212ENST00000496514 TTC5Q8N0Z6 440 aa14.98□□□□□ -0.01
PDE6B-212ENST00000496514 CHMP3Q9Y3E7 222 aa14.98□□□□□ -0.01
PDE6B-212ENST00000496514 DDX49Q9Y6V7 483 aaKnown RBP14.98□□□□□ -0.01
PDE6B-212ENST00000496514 ADAMTSL3P82987 1691 aa14.98□□□□□ -0.01
PDE6B-212ENST00000496514 GRM8O00222 908 aa14.98□□□□□ -0.01
PDE6B-212ENST00000496514 IFIT2P09913 472 aaKnown RBP14.98□□□□□ -0.01
PDE6B-212ENST00000496514 RASEFQ8IZ41 740 aa14.98□□□□□ -0.01
PDE6B-212ENST00000496514 BOLA2Q9H3K6 86 aa14.98□□□□□ -0.01
PDE6B-212ENST00000496514 RBM27Q9P2N5 1060 aaKnown RBP14.98□□□□□ -0.01
PDE6B-212ENST00000496514 COL9A3Q14050 684 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms