RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 SLC4A10Q6U841 1118 aa10.89□□□□□ -0.67
U2AF1-212ENST00000496462 DNAJC10Q8IXB1 793 aa10.89□□□□□ -0.67
U2AF1-212ENST00000496462 TSR2Q969E8 191 aaKnown RBP10.89□□□□□ -0.67
U2AF1-212ENST00000496462 PARP3Q9Y6F1 533 aa10.89□□□□□ -0.67
U2AF1-212ENST00000496462 COL18A1P39060 1754 aa10.89□□□□□ -0.67
U2AF1-212ENST00000496462 SLFN5Q08AF3 891 aa10.89□□□□□ -0.67
U2AF1-212ENST00000496462 ZKSCAN2Q63HK3 967 aa10.89□□□□□ -0.67
U2AF1-212ENST00000496462 ZNF496Q96IT1 587 aaPredicted RBP10.89□□□□□ -0.67
U2AF1-212ENST00000496462 ATF5Q9Y2D1 282 aaPredicted RBP10.89□□□□□ -0.67
U2AF1-212ENST00000496462 SLC4A2P04920 1241 aa10.89□□□□□ -0.67
U2AF1-212ENST00000496462 ALDH1L2Q3SY69 923 aa10.89□□□□□ -0.67
U2AF1-212ENST00000496462 TAF7LQ5H9L4 462 aa10.89□□□□□ -0.67
U2AF1-212ENST00000496462 NLGN1Q8N2Q7 840 aa10.89□□□□□ -0.67
U2AF1-212ENST00000496462 ANO8Q9HCE9 1232 aaPredicted RBP10.89□□□□□ -0.67
U2AF1-212ENST00000496462 C9orf78Q9NZ63 289 aaPredicted RBP10.89□□□□□ -0.67
U2AF1-212ENST00000496462 PPP1R42Q7Z4L9 355 aa10.88□□□□□ -0.67
U2AF1-212ENST00000496462 RC3H1Q5TC82 1133 aaKnown RBP10.88□□□□□ -0.67
U2AF1-212ENST00000496462 ATG3Q9NT62 314 aa10.88□□□□□ -0.67
U2AF1-212ENST00000496462 FANCIQ9NVI1 1328 aa10.88□□□□□ -0.67
U2AF1-212ENST00000496462 SLC16A10Q8TF71 515 aa10.88□□□□□ -0.67
U2AF1-212ENST00000496462 NYXQ9GZU5 481 aa10.88□□□□□ -0.67
U2AF1-212ENST00000496462 EIF4A1P60842 406 aaKnown RBP10.87□□□□□ -0.67
U2AF1-212ENST00000496462 DZIP3Q86Y13 1208 aaKnown RBP10.87□□□□□ -0.67
U2AF1-212ENST00000496462 DDX21Q9NR30 783 aaKnown RBP eCLIP10.87□□□□□ -0.67
U2AF1-212ENST00000496462 HEG1Q9ULI3 1381 aa10.87□□□□□ -0.67
U2AF1-212ENST00000496462 IL6STP40189 918 aaPredicted RBP10.87□□□□□ -0.67
U2AF1-212ENST00000496462 ST5P78524 1137 aa10.87□□□□□ -0.67
U2AF1-212ENST00000496462 PROM2Q8N271 834 aa10.87□□□□□ -0.67
U2AF1-212ENST00000496462 SETDB2Q96T68 719 aa10.87□□□□□ -0.67
U2AF1-212ENST00000496462 TRIM35Q9UPQ4 493 aa10.87□□□□□ -0.67
U2AF1-212ENST00000496462 SPON1Q9HCB6 807 aa10.87□□□□□ -0.67
U2AF1-212ENST00000496462 RPS6KA4O75676 772 aa10.86□□□□□ -0.67
U2AF1-212ENST00000496462 SSFA2P28290 1259 aa10.86□□□□□ -0.67
U2AF1-212ENST00000496462 USP54Q70EL1 1684 aa10.86□□□□□ -0.67
U2AF1-212ENST00000496462 COL3A1P02461 1466 aaPredicted RBP10.86□□□□□ -0.67
U2AF1-212ENST00000496462 SLC15A2Q16348 729 aa10.85□□□□□ -0.67
U2AF1-212ENST00000496462 PDGFDQ9GZP0 370 aaPredicted RBP10.85□□□□□ -0.67
U2AF1-212ENST00000496462 CRKLP46109 303 aaKnown RBP10.85□□□□□ -0.67
U2AF1-212ENST00000496462 CCT4P50991 539 aaKnown RBP10.85□□□□□ -0.67
U2AF1-212ENST00000496462 PARP10Q53GL7 1025 aa10.85□□□□□ -0.67
U2AF1-212ENST00000496462 LRRC37A3O60309 1634 aa10.85□□□□□ -0.67
U2AF1-212ENST00000496462 GIGYF1O75420 1035 aaPredicted RBP10.85□□□□□ -0.67
U2AF1-212ENST00000496462 HMMRO75330 724 aa10.84□□□□□ -0.67
U2AF1-212ENST00000496462 TPTE2Q6XPS3 522 aa10.84□□□□□ -0.67
U2AF1-212ENST00000496462 ANKRD13DQ6ZTN6 518 aa10.84□□□□□ -0.67
U2AF1-212ENST00000496462 BICDL1Q6ZP65 573 aa10.84□□□□□ -0.67
U2AF1-212ENST00000496462 SRCIN1Q9C0H9 1055 aa10.84□□□□□ -0.67
U2AF1-212ENST00000496462 CHMP3Q9Y3E7 222 aa10.84□□□□□ -0.67
U2AF1-212ENST00000496462 PTPRCP08575 1304 aa10.84□□□□□ -0.67
U2AF1-212ENST00000496462 PARP4Q9UKK3 1724 aaKnown RBP10.84□□□□□ -0.67
U2AF1-212ENST00000496462 GNAI3P08754 354 aa10.84□□□□□ -0.67
U2AF1-212ENST00000496462 OS9Q13438 667 aaPredicted RBP10.84□□□□□ -0.67
U2AF1-212ENST00000496462 NBPF5PQ86XG9 351 aaPredicted RBP10.84□□□□□ -0.67
U2AF1-212ENST00000496462 PDZRN3Q9UPQ7 1066 aa10.84□□□□□ -0.67
U2AF1-212ENST00000496462 RGPD1P0DJD0 1748 aa10.83□□□□□ -0.68
U2AF1-212ENST00000496462 G3V3G9 751 aa10.83□□□□□ -0.68
U2AF1-212ENST00000496462 DCAF8Q5TAQ9 597 aa10.83□□□□□ -0.68
U2AF1-212ENST00000496462 LRRC4BQ9NT99 713 aa10.83□□□□□ -0.68
U2AF1-212ENST00000496462 ITPRIPQ8IWB1 547 aa10.83□□□□□ -0.68
U2AF1-212ENST00000496462 BCL9O00512 1426 aa10.83□□□□□ -0.68
U2AF1-212ENST00000496462 CNTNAP4Q9C0A0 1308 aa10.83□□□□□ -0.68
U2AF1-212ENST00000496462 TCERG1O14776 1098 aaKnown RBP10.83□□□□□ -0.68
U2AF1-212ENST00000496462 CEMIPQ8WUJ3 1361 aa10.82□□□□□ -0.68
U2AF1-212ENST00000496462 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.82□□□□□ -0.68
U2AF1-212ENST00000496462 XAGE3Q8WTP9 111 aa10.82□□□□□ -0.68
U2AF1-212ENST00000496462 COPS6Q7L5N1 327 aa10.82□□□□□ -0.68
U2AF1-212ENST00000496462 ZBTB3Q9H5J0 574 aa10.82□□□□□ -0.68
U2AF1-212ENST00000496462 DZIP1LQ8IYY4 767 aaKnown RBP10.82□□□□□ -0.68
U2AF1-212ENST00000496462 DNAAF4Q8WXU2 420 aa10.82□□□□□ -0.68
U2AF1-212ENST00000496462 CHPF2Q9P2E5 772 aa10.82□□□□□ -0.68
U2AF1-212ENST00000496462 FLIIQ13045 1269 aa10.81□□□□□ -0.68
U2AF1-212ENST00000496462 TBC1D2BQ9UPU7 963 aa10.81□□□□□ -0.68
U2AF1-212ENST00000496462 NIP7Q9Y221 180 aaKnown RBP eCLIP10.81□□□□□ -0.68
U2AF1-212ENST00000496462 FAM177BA6PVY3 158 aa10.81□□□□□ -0.68
U2AF1-212ENST00000496462 A1BGP04217 495 aa10.81□□□□□ -0.68
U2AF1-212ENST00000496462 ZNF827Q17R98 1081 aa10.81□□□□□ -0.68
U2AF1-212ENST00000496462 PLBD2Q8NHP8 589 aa10.81□□□□□ -0.68
U2AF1-212ENST00000496462 TRMT112Q9UI30 125 aaKnown RBP10.81□□□□□ -0.68
U2AF1-212ENST00000496462 AAMPQ13685 434 aa10.81□□□□□ -0.68
U2AF1-212ENST00000496462 MSL1Q68DK7 614 aa10.81□□□□□ -0.68
U2AF1-212ENST00000496462 KSR2Q6VAB6 950 aa10.81□□□□□ -0.68
U2AF1-212ENST00000496462 CDCA7LQ96GN5 454 aa10.81□□□□□ -0.68
U2AF1-212ENST00000496462 BCL2L13Q9BXK5 485 aa10.81□□□□□ -0.68
U2AF1-212ENST00000496462 CWC25Q9NXE8 425 aaPredicted RBP10.81□□□□□ -0.68
U2AF1-212ENST00000496462 CLEC4GQ6UXB4 293 aa10.8□□□□□ -0.68
U2AF1-212ENST00000496462 DDX19BQ9UMR2 479 aa10.8□□□□□ -0.68
U2AF1-212ENST00000496462 ERVV-1B6SEH8 477 aa10.8□□□□□ -0.68
U2AF1-212ENST00000496462 RPGRQ92834 1020 aaKnown RBP10.8□□□□□ -0.68
U2AF1-212ENST00000496462 UTP14AQ9BVJ6 771 aaKnown RBP10.8□□□□□ -0.68
U2AF1-212ENST00000496462 UBTFL1P0CB47 393 aaPredicted RBP10.8□□□□□ -0.68
U2AF1-212ENST00000496462 ZNF853P0CG23 659 aa10.8□□□□□ -0.68
U2AF1-212ENST00000496462 C8orf58Q8NAV2 365 aa10.8□□□□□ -0.68
U2AF1-212ENST00000496462 USP16Q9Y5T5 823 aa10.8□□□□□ -0.68
U2AF1-212ENST00000496462 PEAK1Q9H792 1746 aa10.79□□□□□ -0.68
U2AF1-212ENST00000496462 CYP19A1P11511 503 aaPredicted RBP10.79□□□□□ -0.68
U2AF1-212ENST00000496462 CNBD1Q8NA66 436 aa10.79□□□□□ -0.68
U2AF1-212ENST00000496462 MYD88Q99836 296 aa10.79□□□□□ -0.68
U2AF1-212ENST00000496462 SMIM5Q71RC9 77 aa10.79□□□□□ -0.68
U2AF1-212ENST00000496462 NLRP3Q96P20 1036 aa10.79□□□□□ -0.68
U2AF1-212ENST00000496462 NARFQ9UHQ1 456 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms