RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 ERVV-2B6SEH9 535 aa16.4■□□□□ 0.22
ATG3-209ENST00000496423 POLRMTO00411 1230 aaKnown RBP16.4■□□□□ 0.22
ATG3-209ENST00000496423 PHKG2P15735 406 aa16.4■□□□□ 0.22
ATG3-209ENST00000496423 FOXD4L1Q9NU39 408 aa16.4■□□□□ 0.22
ATG3-209ENST00000496423 PASKQ96RG2 1323 aa16.4■□□□□ 0.22
ATG3-209ENST00000496423 KDRP35968 1356 aa16.39■□□□□ 0.21
ATG3-209ENST00000496423 COL5A3P25940 1745 aaPredicted RBP16.39■□□□□ 0.21
ATG3-209ENST00000496423 HSP90AB1P08238 724 aaKnown RBP16.39■□□□□ 0.21
ATG3-209ENST00000496423 TM4SF1P30408 202 aa16.39■□□□□ 0.21
ATG3-209ENST00000496423 CARD11Q9BXL7 1154 aa16.39■□□□□ 0.21
ATG3-209ENST00000496423 SRP68Q9UHB9 627 aaKnown RBP16.39■□□□□ 0.21
ATG3-209ENST00000496423 DICER1Q9UPY3 1922 aaKnown RBP16.39■□□□□ 0.21
ATG3-209ENST00000496423 WDR33Q9C0J8 1336 aaKnown RBP16.38■□□□□ 0.21
ATG3-209ENST00000496423 RASSF10A6NK89 507 aa16.37■□□□□ 0.21
ATG3-209ENST00000496423 C2CD5Q86YS7 1000 aa16.37■□□□□ 0.21
ATG3-209ENST00000496423 SLC4A9Q96Q91 983 aa16.37■□□□□ 0.21
ATG3-209ENST00000496423 GGNBP2Q9H3C7 697 aa16.37■□□□□ 0.21
ATG3-209ENST00000496423 PDZRN3Q9UPQ7 1066 aa16.37■□□□□ 0.21
ATG3-209ENST00000496423 CLEC11AQ9Y240 323 aa16.37■□□□□ 0.21
ATG3-209ENST00000496423 NFKBIEO00221 500 aa16.36■□□□□ 0.21
ATG3-209ENST00000496423 FYB1O15117 783 aa16.36■□□□□ 0.21
ATG3-209ENST00000496423 POTEIP0CG38 1075 aa16.36■□□□□ 0.21
ATG3-209ENST00000496423 POTEJP0CG39 1038 aa16.36■□□□□ 0.21
ATG3-209ENST00000496423 CRKLP46109 303 aaKnown RBP16.36■□□□□ 0.21
ATG3-209ENST00000496423 DDNO94850 711 aaPredicted RBP16.35■□□□□ 0.21
ATG3-209ENST00000496423 CABP4P57796 275 aa16.35■□□□□ 0.21
ATG3-209ENST00000496423 TONSLQ96HA7 1378 aa16.35■□□□□ 0.21
ATG3-209ENST00000496423 MYH14Q7Z406 1995 aaKnown RBP16.35■□□□□ 0.21
ATG3-209ENST00000496423 DLEC1Q9Y238 1755 aa16.34■□□□□ 0.21
ATG3-209ENST00000496423 SCN4AP35499 1836 aa16.34■□□□□ 0.21
ATG3-209ENST00000496423 ECE1P42892 770 aa16.34■□□□□ 0.21
ATG3-209ENST00000496423 ABT1Q9ULW3 272 aaKnown RBP16.34■□□□□ 0.21
ATG3-209ENST00000496423 PPM1GO15355 546 aaPredicted RBP16.33■□□□□ 0.2
ATG3-209ENST00000496423 ITGBL1O95965 494 aaPredicted RBP16.33■□□□□ 0.2
ATG3-209ENST00000496423 EAPPQ56P03 285 aaPredicted RBP16.33■□□□□ 0.2
ATG3-209ENST00000496423 USPL1Q5W0Q7 1092 aa16.33■□□□□ 0.2
ATG3-209ENST00000496423 PTCD1O75127 700 aaKnown RBP16.32■□□□□ 0.2
ATG3-209ENST00000496423 SERPINB2P05120 415 aa16.32■□□□□ 0.2
ATG3-209ENST00000496423 PNMA8AQ86V59 439 aaPredicted RBP16.32■□□□□ 0.2
ATG3-209ENST00000496423 ZNF622Q969S3 477 aaKnown RBP eCLIP16.32■□□□□ 0.21e-6■■■□□ 18.5
ATG3-209ENST00000496423 TAOK3Q9H2K8 898 aa16.32■□□□□ 0.2
ATG3-209ENST00000496423 TAF1DQ9H5J8 278 aaPredicted RBP16.32■□□□□ 0.2
ATG3-209ENST00000496423 LTBP3Q9NS15 1303 aa16.31■□□□□ 0.2
ATG3-209ENST00000496423 SOGA3Q5TF21 947 aa16.31■□□□□ 0.2
ATG3-209ENST00000496423 PAXIP1Q6ZW49 1069 aaPredicted RBP16.31■□□□□ 0.2
ATG3-209ENST00000496423 AFDNP55196 1824 aaKnown RBP16.31■□□□□ 0.2
ATG3-209ENST00000496423 NCAPD2Q15021 1401 aa16.3■□□□□ 0.2
ATG3-209ENST00000496423 C21orf2O43822 256 aa16.3■□□□□ 0.2
ATG3-209ENST00000496423 PDE6BP35913 854 aa16.3■□□□□ 0.2
ATG3-209ENST00000496423 L3MBTL3Q96JM7 780 aaPredicted RBP16.3■□□□□ 0.2
ATG3-209ENST00000496423 CA12O43570 354 aa16.29■□□□□ 0.2
ATG3-209ENST00000496423 NFIXQ14938 502 aa16.29■□□□□ 0.2
ATG3-209ENST00000496423 CNTROBQ8N137 903 aa16.29■□□□□ 0.2
ATG3-209ENST00000496423 EYA1Q99502 592 aa16.29■□□□□ 0.2
ATG3-209ENST00000496423 ZNF219Q9P2Y4 722 aaPredicted RBP16.29■□□□□ 0.2
ATG3-209ENST00000496423 HACL1Q9UJ83 578 aa16.29■□□□□ 0.2
ATG3-209ENST00000496423 PLEKHO1Q53GL0 409 aaPredicted RBP16.28■□□□□ 0.2
ATG3-209ENST00000496423 GPR101Q96P66 508 aaPredicted RBP16.28■□□□□ 0.2
ATG3-209ENST00000496423 MCOLN1Q9GZU1 580 aa16.28■□□□□ 0.2
ATG3-209ENST00000496423 NARFQ9UHQ1 456 aa16.28■□□□□ 0.2
ATG3-209ENST00000496423 FER1L6Q2WGJ9 1857 aa16.28■□□□□ 0.2
ATG3-209ENST00000496423 NEUROD1Q13562 356 aa16.27■□□□□ 0.2
ATG3-209ENST00000496423 EMILIN1Q9Y6C2 1016 aa16.27■□□□□ 0.2
ATG3-209ENST00000496423 WASHC2AQ641Q2 1341 aa16.26■□□□□ 0.19
ATG3-209ENST00000496423 NRXN2Q9P2S2 1712 aa16.26■□□□□ 0.19
ATG3-209ENST00000496423 CNKSR1Q969H4 720 aa16.26■□□□□ 0.19
ATG3-209ENST00000496423 CAPNS2Q96L46 248 aa16.26■□□□□ 0.19
ATG3-209ENST00000496423 ST20-MTHFSA0A0A6YYL1 179 aa16.25■□□□□ 0.19
ATG3-209ENST00000496423 EPHX2P34913 555 aa16.25■□□□□ 0.19
ATG3-209ENST00000496423 MAP2K2P36507 400 aa16.25■□□□□ 0.19
ATG3-209ENST00000496423 MTHFSP49914 203 aa16.25■□□□□ 0.19
ATG3-209ENST00000496423 INTS5Q6P9B9 1019 aaKnown RBP16.25■□□□□ 0.19
ATG3-209ENST00000496423 KIF20BQ96Q89 1820 aa16.24■□□□□ 0.19
ATG3-209ENST00000496423 GRM1Q13255 1194 aa16.24■□□□□ 0.19
ATG3-209ENST00000496423 DGKZQ13574 1117 aa16.24■□□□□ 0.19
ATG3-209ENST00000496423 AMOTQ4VCS5 1084 aa16.24■□□□□ 0.19
ATG3-209ENST00000496423 C1orf141Q5JVX7 400 aa16.24■□□□□ 0.19
ATG3-209ENST00000496423 PRPF38BQ5VTL8 546 aaKnown RBP16.24■□□□□ 0.19
ATG3-209ENST00000496423 BRIP1Q9BX63 1249 aa16.24■□□□□ 0.19
ATG3-209ENST00000496423 MAP1SQ66K74 1059 aaPredicted RBP16.23■□□□□ 0.19
ATG3-209ENST00000496423 NFATC2IPQ8NCF5 419 aa16.23■□□□□ 0.19
ATG3-209ENST00000496423 DDX21Q9NR30 783 aaKnown RBP eCLIP16.23■□□□□ 0.19
ATG3-209ENST00000496423 SOS1Q07889 1333 aaPredicted RBP16.22■□□□□ 0.19
ATG3-209ENST00000496423 NPHP1O15259 732 aa16.22■□□□□ 0.19
ATG3-209ENST00000496423 ZNF530Q6P9A1 599 aaPredicted RBP16.22■□□□□ 0.19
ATG3-209ENST00000496423 SIN3AQ96ST3 1273 aa16.22■□□□□ 0.19
ATG3-209ENST00000496423 PDE4DIPQ5VU43 2346 aa16.22■□□□□ 0.19
ATG3-209ENST00000496423 CYP4F22Q6NT55 531 aa16.2■□□□□ 0.18
ATG3-209ENST00000496423 BICDL1Q6ZP65 573 aa16.2■□□□□ 0.18
ATG3-209ENST00000496423 COL15A1P39059 1388 aa16.2■□□□□ 0.18
ATG3-209ENST00000496423 ANKRD26Q9UPS8 1709 aa16.19■□□□□ 0.18
ATG3-209ENST00000496423 ADAMTS7Q9UKP4 1686 aa16.19■□□□□ 0.18
ATG3-209ENST00000496423 A0A087WZG4 1122 aa16.19■□□□□ 0.18
ATG3-209ENST00000496423 STYK1Q6J9G0 422 aa16.19■□□□□ 0.18
ATG3-209ENST00000496423 GCC1Q96CN9 775 aa16.19■□□□□ 0.18
ATG3-209ENST00000496423 TSKSQ9UJT2 592 aa16.19■□□□□ 0.18
ATG3-209ENST00000496423 TJP1Q07157 1748 aa16.19■□□□□ 0.18
ATG3-209ENST00000496423 TNRC18O15417 2968 aaPredicted RBP16.18■□□□□ 0.18
ATG3-209ENST00000496423 CDCA8Q53HL2 280 aa16.18■□□□□ 0.18
ATG3-209ENST00000496423 DNAJC10Q8IXB1 793 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms