RNA–Protein interactions for RNA: ENST00000496393.2

NVL-223, Transcript of nuclear VCP-like, human

TSL 3

Gene NVL, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NVL-223	ENST00000496393	WASHC2A	Q641Q2	1341 aa		10.88	□□□□□ -0.67
NVL-223	ENST00000496393	GYS1	P13807	737 aa		10.88	□□□□□ -0.67
NVL-223	ENST00000496393	ATN1	P54259	1190 aa	Predicted RBP	10.88	□□□□□ -0.67
NVL-223	ENST00000496393	C16orf71	Q8IYS4	520 aa	Predicted RBP	10.88	□□□□□ -0.67
NVL-223	ENST00000496393	NLGN1	Q8N2Q7	840 aa		10.88	□□□□□ -0.67
NVL-223	ENST00000496393	KIF12	Q96FN5	646 aa		10.88	□□□□□ -0.67
NVL-223	ENST00000496393	PARP3	Q9Y6F1	533 aa		10.88	□□□□□ -0.67
NVL-223	ENST00000496393	RFC4	P35249	363 aa		10.87	□□□□□ -0.67
NVL-223	ENST00000496393	EIF4A2	Q14240	407 aa	Known RBP	10.87	□□□□□ -0.67
NVL-223	ENST00000496393	MIER1	Q8N108	512 aa		10.87	□□□□□ -0.67
NVL-223	ENST00000496393	POLR3GL	Q9BT43	218 aa		10.87	□□□□□ -0.67
NVL-223	ENST00000496393	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	10.87	□□□□□ -0.67
NVL-223	ENST00000496393	SRP68	Q9UHB9	627 aa	Known RBP	10.87	□□□□□ -0.67
NVL-223	ENST00000496393	PLEKHG2	Q9H7P9	1386 aa		10.87	□□□□□ -0.67
NVL-223	ENST00000496393	CNTNAP4	Q9C0A0	1308 aa		10.86	□□□□□ -0.67
NVL-223	ENST00000496393	ARFGEF1	Q9Y6D6	1849 aa		10.86	□□□□□ -0.67
NVL-223	ENST00000496393	KDM6A	O15550	1401 aa	Predicted RBP	10.86	□□□□□ -0.67
NVL-223	ENST00000496393	C7	P10643	843 aa		10.86	□□□□□ -0.67
NVL-223	ENST00000496393	CDCA8	Q53HL2	280 aa		10.86	□□□□□ -0.67
NVL-223	ENST00000496393	COL13A1	Q5TAT6	717 aa	Predicted RBP	10.86	□□□□□ -0.67
NVL-223	ENST00000496393	RBM46	Q8TBY0	533 aa	Known RBP	10.86	□□□□□ -0.67
NVL-223	ENST00000496393	SLC39A7	Q92504	469 aa		10.86	□□□□□ -0.67
NVL-223	ENST00000496393	RNF181	Q9P0P0	153 aa		10.86	□□□□□ -0.67
NVL-223	ENST00000496393	POLK	Q9UBT6	870 aa		10.86	□□□□□ -0.67
NVL-223	ENST00000496393	MYH14	Q7Z406	1995 aa	Known RBP	10.86	□□□□□ -0.67
NVL-223	ENST00000496393	PTCD1	O75127	700 aa	Known RBP	10.85	□□□□□ -0.67
NVL-223	ENST00000496393	KCNA3	P22001	575 aa		10.85	□□□□□ -0.67
NVL-223	ENST00000496393	CHRNA5	P30532	468 aa		10.85	□□□□□ -0.67
NVL-223	ENST00000496393	DDR1	Q08345	913 aa		10.85	□□□□□ -0.67
NVL-223	ENST00000496393	FKBP8	Q14318	412 aa		10.85	□□□□□ -0.67
NVL-223	ENST00000496393	RASEF	Q8IZ41	740 aa		10.85	□□□□□ -0.67
NVL-223	ENST00000496393	KLRG1	Q96E93	195 aa		10.85	□□□□□ -0.67
NVL-223	ENST00000496393	ZNF831	Q5JPB2	1677 aa		10.85	□□□□□ -0.67
NVL-223	ENST00000496393	RPS6KA4	O75676	772 aa		10.84	□□□□□ -0.67
NVL-223	ENST00000496393	CABP4	P57796	275 aa		10.84	□□□□□ -0.67
NVL-223	ENST00000496393	DALRD3	Q5D0E6	543 aa	Known RBP	10.84	□□□□□ -0.67
NVL-223	ENST00000496393	ZNF530	Q6P9A1	599 aa	Predicted RBP	10.84	□□□□□ -0.67
NVL-223	ENST00000496393	DCAF5	Q96JK2	942 aa		10.84	□□□□□ -0.67
NVL-223	ENST00000496393	RRAGC	Q9HB90	399 aa		10.84	□□□□□ -0.67
NVL-223	ENST00000496393	PIM2	Q9P1W9	311 aa		10.84	□□□□□ -0.67
NVL-223	ENST00000496393	TJP1	Q07157	1748 aa		10.84	□□□□□ -0.67
NVL-223	ENST00000496393	KDM2B	Q8NHM5	1336 aa		10.84	□□□□□ -0.67
NVL-223	ENST00000496393	TNRC6C	Q9HCJ0	1690 aa	Known RBP	10.83	□□□□□ -0.68
NVL-223	ENST00000496393	ERVV-2	B6SEH9	535 aa		10.83	□□□□□ -0.68
NVL-223	ENST00000496393	CRKL	P46109	303 aa	Known RBP	10.83	□□□□□ -0.68
NVL-223	ENST00000496393	RASSF7	Q02833	373 aa		10.83	□□□□□ -0.68
NVL-223	ENST00000496393	RC3H1	Q5TC82	1133 aa	Known RBP	10.83	□□□□□ -0.68
NVL-223	ENST00000496393	POTEM	A6NI47	508 aa		10.82	□□□□□ -0.68
NVL-223	ENST00000496393	MAP3K13	O43283	966 aa		10.82	□□□□□ -0.68
NVL-223	ENST00000496393	FSTL1	Q12841	308 aa		10.82	□□□□□ -0.68
NVL-223	ENST00000496393	AEBP1	Q8IUX7	1158 aa		10.82	□□□□□ -0.68
NVL-223	ENST00000496393	USP42	Q9H9J4	1324 aa	Known RBP	10.82	□□□□□ -0.68
NVL-223	ENST00000496393	POTEF	A5A3E0	1075 aa		10.81	□□□□□ -0.68
NVL-223	ENST00000496393	HSP90AB1	P08238	724 aa	Known RBP	10.81	□□□□□ -0.68
NVL-223	ENST00000496393	PLEKHO1	Q53GL0	409 aa	Predicted RBP	10.81	□□□□□ -0.68
NVL-223	ENST00000496393	TNS4	Q8IZW8	715 aa		10.81	□□□□□ -0.68
NVL-223	ENST00000496393	JMY	Q8N9B5	988 aa		10.81	□□□□□ -0.68
NVL-223	ENST00000496393	BMP2K	Q9NSY1	1161 aa	Predicted RBP	10.81	□□□□□ -0.68
NVL-223	ENST00000496393	SBF1	O95248	1867 aa		10.81	□□□□□ -0.68
NVL-223	ENST00000496393	MTHFS	P49914	203 aa		10.8	□□□□□ -0.68
NVL-223	ENST00000496393	ADAMTS7	Q9UKP4	1686 aa		10.79	□□□□□ -0.68
NVL-223	ENST00000496393	TIAM2	Q8IVF5	1701 aa		10.79	□□□□□ -0.68
NVL-223	ENST00000496393	POLRMT	O00411	1230 aa	Known RBP	10.79	□□□□□ -0.68
NVL-223	ENST00000496393	C1orf141	Q5JVX7	400 aa		10.79	□□□□□ -0.68
NVL-223	ENST00000496393	POTEG	Q6S5H5	508 aa		10.79	□□□□□ -0.68
NVL-223	ENST00000496393	NFATC2IP	Q8NCF5	419 aa		10.79	□□□□□ -0.68
NVL-223	ENST00000496393	SMC1B	Q8NDV3	1235 aa		10.79	□□□□□ -0.68
NVL-223	ENST00000496393	PRELP	P51888	382 aa		10.78	□□□□□ -0.68
NVL-223	ENST00000496393	USPL1	Q5W0Q7	1092 aa		10.78	□□□□□ -0.68
NVL-223	ENST00000496393	INTS5	Q6P9B9	1019 aa	Known RBP	10.78	□□□□□ -0.68
NVL-223	ENST00000496393	DNAJC10	Q8IXB1	793 aa		10.78	□□□□□ -0.68
NVL-223	ENST00000496393	AFDN	P55196	1824 aa	Known RBP	10.78	□□□□□ -0.68
NVL-223	ENST00000496393	HSPA1A	P0DMV8	641 aa	Known RBP	10.77	□□□□□ -0.69
NVL-223	ENST00000496393	HSPA1B	P0DMV9	641 aa	Known RBP	10.77	□□□□□ -0.69
NVL-223	ENST00000496393	AMOT	Q4VCS5	1084 aa		10.77	□□□□□ -0.69
NVL-223	ENST00000496393	SULT6B1	Q6IMI4	303 aa		10.77	□□□□□ -0.69
NVL-223	ENST00000496393	SOS1	Q07889	1333 aa	Predicted RBP	10.77	□□□□□ -0.69
NVL-223	ENST00000496393	SCN11A	Q9UI33	1791 aa		10.77	□□□□□ -0.69
NVL-223	ENST00000496393	CARMIL3	Q8ND23	1372 aa		10.77	□□□□□ -0.69
NVL-223	ENST00000496393	ZPR1	O75312	459 aa		10.76	□□□□□ -0.69
NVL-223	ENST00000496393	TM4SF1	P30408	202 aa		10.76	□□□□□ -0.69
NVL-223	ENST00000496393	NFIX	Q14938	502 aa		10.76	□□□□□ -0.69
NVL-223	ENST00000496393	PCNT	O95613	3336 aa		10.76	□□□□□ -0.69
NVL-223	ENST00000496393	DLEC1	Q9Y238	1755 aa		10.75	□□□□□ -0.69
NVL-223	ENST00000496393	LMNB1	P20700	586 aa		10.75	□□□□□ -0.69
NVL-223	ENST00000496393	SLC39A6	Q13433	755 aa		10.75	□□□□□ -0.69
NVL-223	ENST00000496393	COL15A1	P39059	1388 aa		10.75	□□□□□ -0.69
NVL-223	ENST00000496393	CCDC88A	Q3V6T2	1871 aa		10.74	□□□□□ -0.69
NVL-223	ENST00000496393	NFKBIE	O00221	500 aa		10.74	□□□□□ -0.69
NVL-223	ENST00000496393	BICDL1	Q6ZP65	573 aa		10.74	□□□□□ -0.69
NVL-223	ENST00000496393	C2CD5	Q86YS7	1000 aa		10.74	□□□□□ -0.69
NVL-223	ENST00000496393	PANK3	Q9H999	370 aa		10.74	□□□□□ -0.69
NVL-223	ENST00000496393	ZBTB1	Q9Y2K1	713 aa		10.74	□□□□□ -0.69
NVL-223	ENST00000496393	NRXN2	Q9P2S2	1712 aa		10.73	□□□□□ -0.69
NVL-223	ENST00000496393	GLTPD2	A6NH11	291 aa		10.73	□□□□□ -0.69
NVL-223	ENST00000496393	SERPINB2	P05120	415 aa		10.73	□□□□□ -0.69
NVL-223	ENST00000496393	VEGFA	P15692	232 aa	Predicted RBP	10.73	□□□□□ -0.69
NVL-223	ENST00000496393	MORC1	Q86VD1	984 aa		10.73	□□□□□ -0.69
NVL-223	ENST00000496393	PLCD3	Q8N3E9	789 aa		10.73	□□□□□ -0.69
NVL-223	ENST00000496393	TTLL6	Q8N841	843 aa		10.73	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms