RNA–Protein interactions for RNA: ENST00000496206.5

NEPRO-223, Transcript of nucleolus and neural progenitor protein, human

TSL 5

Gene NEPRO, Length 751 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-223	ENST00000496206	U2AF1L5	P0DN76	240 aa	Predicted RBP	11.74	□□□□□ -0.53
NEPRO-223	ENST00000496206	TGFB2	P61812	414 aa		11.74	□□□□□ -0.53
NEPRO-223	ENST00000496206	U2AF1	Q01081	240 aa	Known RBP eCLIP	11.74	□□□□□ -0.53
NEPRO-223	ENST00000496206	IL17RE	Q8NFR9	667 aa		11.74	□□□□□ -0.53
NEPRO-223	ENST00000496206	PHACTR3	Q96KR7	559 aa		11.74	□□□□□ -0.53
NEPRO-223	ENST00000496206	COL15A1	P39059	1388 aa		11.74	□□□□□ -0.53
NEPRO-223	ENST00000496206	ATP10D	Q9P241	1426 aa		11.74	□□□□□ -0.53
NEPRO-223	ENST00000496206		A0A0G2JLW4	131 aa		11.73	□□□□□ -0.53
NEPRO-223	ENST00000496206	GIGYF1	O75420	1035 aa	Predicted RBP	11.73	□□□□□ -0.53
NEPRO-223	ENST00000496206	DDR1	Q08345	913 aa		11.73	□□□□□ -0.53
NEPRO-223	ENST00000496206	ZBTB1	Q9Y2K1	713 aa		11.73	□□□□□ -0.53
NEPRO-223	ENST00000496206	NRXN2	Q9P2S2	1712 aa		11.72	□□□□□ -0.53
NEPRO-223	ENST00000496206	SCN7A	Q01118	1682 aa		11.72	□□□□□ -0.53
NEPRO-223	ENST00000496206	CEMIP	Q8WUJ3	1361 aa		11.72	□□□□□ -0.53
NEPRO-223	ENST00000496206	HEG1	Q9ULI3	1381 aa		11.72	□□□□□ -0.53
NEPRO-223	ENST00000496206	STARD3NL	O95772	234 aa		11.72	□□□□□ -0.53
NEPRO-223	ENST00000496206	DPEP1	P16444	411 aa		11.72	□□□□□ -0.53
NEPRO-223	ENST00000496206	USPL1	Q5W0Q7	1092 aa		11.72	□□□□□ -0.53
NEPRO-223	ENST00000496206	ZNF790	Q6PG37	636 aa		11.72	□□□□□ -0.53
NEPRO-223	ENST00000496206	ZNF496	Q96IT1	587 aa	Predicted RBP	11.72	□□□□□ -0.53
NEPRO-223	ENST00000496206	BCS1L	Q9Y276	419 aa		11.72	□□□□□ -0.53
NEPRO-223	ENST00000496206	ADCY9	O60503	1353 aa		11.71	□□□□□ -0.53
NEPRO-223	ENST00000496206	CANX	P27824	592 aa	Known RBP	11.71	□□□□□ -0.53
NEPRO-223	ENST00000496206	HOXD11	P31277	338 aa	Predicted RBP	11.71	□□□□□ -0.53
NEPRO-223	ENST00000496206	C1QTNF8	P60827	252 aa		11.71	□□□□□ -0.53
NEPRO-223	ENST00000496206	NARF	Q9UHQ1	456 aa		11.71	□□□□□ -0.53
NEPRO-223	ENST00000496206	DLEC1	Q9Y238	1755 aa		11.71	□□□□□ -0.54
NEPRO-223	ENST00000496206	BTBD11	A6QL63	1104 aa		11.7	□□□□□ -0.54
NEPRO-223	ENST00000496206	POLRMT	O00411	1230 aa	Known RBP	11.7	□□□□□ -0.54
NEPRO-223	ENST00000496206	FCHSD2	O94868	740 aa		11.7	□□□□□ -0.54
NEPRO-223	ENST00000496206	TM4SF1	P30408	202 aa		11.7	□□□□□ -0.54
NEPRO-223	ENST00000496206	RTF1	Q92541	710 aa	Known RBP	11.7	□□□□□ -0.54
NEPRO-223	ENST00000496206	FMNL2	Q96PY5	1086 aa		11.7	□□□□□ -0.54
NEPRO-223	ENST00000496206	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.7	□□□□□ -0.54
NEPRO-223	ENST00000496206	BCOR	Q6W2J9	1755 aa		11.69	□□□□□ -0.54
NEPRO-223	ENST00000496206	ZNF526	Q8TF50	670 aa	Predicted RBP	11.69	□□□□□ -0.54
NEPRO-223	ENST00000496206	SBF1	O95248	1867 aa		11.68	□□□□□ -0.54
NEPRO-223	ENST00000496206		A0A087WZG4	1122 aa		11.68	□□□□□ -0.54
NEPRO-223	ENST00000496206	KCNA3	P22001	575 aa		11.68	□□□□□ -0.54
NEPRO-223	ENST00000496206	EIF5	P55010	431 aa	Known RBP	11.68	□□□□□ -0.54
NEPRO-223	ENST00000496206	NFIX	Q14938	502 aa		11.68	□□□□□ -0.54
NEPRO-223	ENST00000496206	ARHGAP27	Q6ZUM4	889 aa		11.68	□□□□□ -0.54
NEPRO-223	ENST00000496206	MCM10	Q7L590	875 aa		11.68	□□□□□ -0.54
NEPRO-223	ENST00000496206	GPBP1L1	Q9HC44	474 aa	Predicted RBP	11.68	□□□□□ -0.54
NEPRO-223	ENST00000496206	PIM2	Q9P1W9	311 aa		11.68	□□□□□ -0.54
NEPRO-223	ENST00000496206	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.68	□□□□□ -0.54
NEPRO-223	ENST00000496206	ANKRD31	Q8N7Z5	1873 aa		11.68	□□□□□ -0.54
NEPRO-223	ENST00000496206	LAMB4	A4D0S4	1761 aa		11.67	□□□□□ -0.54
NEPRO-223	ENST00000496206	KCNQ3	O43525	872 aa		11.67	□□□□□ -0.54
NEPRO-223	ENST00000496206	NEFM	P07197	916 aa		11.67	□□□□□ -0.54
NEPRO-223	ENST00000496206	CHRNA5	P30532	468 aa		11.67	□□□□□ -0.54
NEPRO-223	ENST00000496206	DALRD3	Q5D0E6	543 aa	Known RBP	11.67	□□□□□ -0.54
NEPRO-223	ENST00000496206	BCL2L12	Q9HB09	334 aa		11.67	□□□□□ -0.54
NEPRO-223	ENST00000496206	KDM3B	Q7LBC6	1761 aa		11.67	□□□□□ -0.54
NEPRO-223	ENST00000496206	CCDC88A	Q3V6T2	1871 aa		11.66	□□□□□ -0.54
NEPRO-223	ENST00000496206	SENP3-EIF4A1	A0A087X0R7	540 aa		11.66	□□□□□ -0.54
NEPRO-223	ENST00000496206	HTATSF1	O43719	755 aa	Known RBP	11.66	□□□□□ -0.54
NEPRO-223	ENST00000496206	A1BG	P04217	495 aa		11.66	□□□□□ -0.54
NEPRO-223	ENST00000496206	IL6ST	P40189	918 aa	Predicted RBP	11.66	□□□□□ -0.54
NEPRO-223	ENST00000496206	DCTN1	Q14203	1278 aa		11.66	□□□□□ -0.54
NEPRO-223	ENST00000496206	NPM2	Q86SE8	214 aa	Known RBP	11.66	□□□□□ -0.54
NEPRO-223	ENST00000496206	CACNA1S	Q13698	1873 aa		11.66	□□□□□ -0.54
NEPRO-223	ENST00000496206	SERPINB2	P05120	415 aa		11.65	□□□□□ -0.54
NEPRO-223	ENST00000496206	BICDL1	Q6ZP65	573 aa		11.65	□□□□□ -0.54
NEPRO-223	ENST00000496206	TBC1D2B	Q9UPU7	963 aa		11.65	□□□□□ -0.54
NEPRO-223	ENST00000496206	COL11A2	P13942	1736 aa	Predicted RBP	11.65	□□□□□ -0.54
NEPRO-223	ENST00000496206	CARMIL3	Q8ND23	1372 aa		11.64	□□□□□ -0.55
NEPRO-223	ENST00000496206	PRAMEF22	A3QJZ6	481 aa		11.63	□□□□□ -0.55
NEPRO-223	ENST00000496206	SNRPA1	P09661	255 aa	Known RBP	11.63	□□□□□ -0.55
NEPRO-223	ENST00000496206	TAF7	Q15545	349 aa	Predicted RBP	11.63	□□□□□ -0.55
NEPRO-223	ENST00000496206	TBC1D9B	Q66K14	1250 aa		11.63	□□□□□ -0.55
NEPRO-223	ENST00000496206	USP16	Q9Y5T5	823 aa		11.63	□□□□□ -0.55
NEPRO-223	ENST00000496206	MAPK8IP3	Q9UPT6	1336 aa		11.62	□□□□□ -0.55
NEPRO-223	ENST00000496206	CAMTA2	O94983	1202 aa		11.62	□□□□□ -0.55
NEPRO-223	ENST00000496206	PIP4K2A	P48426	406 aa	Predicted RBP	11.62	□□□□□ -0.55
NEPRO-223	ENST00000496206	NFE2L2	Q16236	605 aa		11.62	□□□□□ -0.55
NEPRO-223	ENST00000496206	C9orf131	Q5VYM1	1079 aa		11.62	□□□□□ -0.55
NEPRO-223	ENST00000496206	DZIP3	Q86Y13	1208 aa	Known RBP	11.62	□□□□□ -0.55
NEPRO-223	ENST00000496206	C2CD5	Q86YS7	1000 aa		11.62	□□□□□ -0.55
NEPRO-223	ENST00000496206	PLEKHF1	Q96S99	279 aa		11.62	□□□□□ -0.55
NEPRO-223	ENST00000496206	PNN	Q9H307	717 aa	Known RBP	11.62	□□□□□ -0.55
NEPRO-223	ENST00000496206	TIAM2	Q8IVF5	1701 aa		11.61	□□□□□ -0.55
NEPRO-223	ENST00000496206		H0YIN7	160 aa		11.61	□□□□□ -0.55
NEPRO-223	ENST00000496206	RALBP1	Q15311	655 aa		11.61	□□□□□ -0.55
NEPRO-223	ENST00000496206	SETDB2	Q96T68	719 aa		11.61	□□□□□ -0.55
NEPRO-223	ENST00000496206	MIS18A	Q9NYP9	233 aa		11.61	□□□□□ -0.55
NEPRO-223	ENST00000496206	ARFGEF2	Q9Y6D5	1785 aa		11.61	□□□□□ -0.55
NEPRO-223	ENST00000496206	NUP98	P52948	1817 aa		11.6	□□□□□ -0.55
NEPRO-223	ENST00000496206	NPHP1	O15259	732 aa		11.6	□□□□□ -0.55
NEPRO-223	ENST00000496206	DDX10	Q13206	875 aa	Known RBP	11.6	□□□□□ -0.55
NEPRO-223	ENST00000496206	PRR5L	Q6MZQ0	368 aa		11.6	□□□□□ -0.55
NEPRO-223	ENST00000496206	TTLL6	Q8N841	843 aa		11.6	□□□□□ -0.55
NEPRO-223	ENST00000496206	RNF181	Q9P0P0	153 aa		11.6	□□□□□ -0.55
NEPRO-223	ENST00000496206	DICER1	Q9UPY3	1922 aa	Known RBP	11.6	□□□□□ -0.55
NEPRO-223	ENST00000496206	FER1L6	Q2WGJ9	1857 aa		11.59	□□□□□ -0.55
NEPRO-223	ENST00000496206	TNRC6C	Q9HCJ0	1690 aa	Known RBP	11.59	□□□□□ -0.55
NEPRO-223	ENST00000496206	KIF3C	O14782	793 aa		11.59	□□□□□ -0.55
NEPRO-223	ENST00000496206	PDE6B	P35913	854 aa		11.59	□□□□□ -0.55
NEPRO-223	ENST00000496206	CCDC24	Q8N4L8	307 aa		11.59	□□□□□ -0.55
NEPRO-223	ENST00000496206	CNBD1	Q8NA66	436 aa		11.59	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms