RNA–Protein interactions for RNA: ENST00000496172.5

ERGIC3-219, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 781 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-219ENST00000496172 LGR6Q9HBX8 967 aa14□□□□□ -0.17
ERGIC3-219ENST00000496172 RNF181Q9P0P0 153 aa14□□□□□ -0.17
ERGIC3-219ENST00000496172 GYS1P13807 737 aa13.99□□□□□ -0.17
ERGIC3-219ENST00000496172 TRAPPC3LQ5T215 181 aa13.99□□□□□ -0.17
ERGIC3-219ENST00000496172 RRAGCQ9HB90 399 aa13.99□□□□□ -0.17
ERGIC3-219ENST00000496172 PIM2Q9P1W9 311 aa13.99□□□□□ -0.17
ERGIC3-219ENST00000496172 RTCBQ9Y3I0 505 aaKnown RBP13.99□□□□□ -0.17
ERGIC3-219ENST00000496172 DLEC1Q9Y238 1755 aa13.99□□□□□ -0.17
ERGIC3-219ENST00000496172 TIAM2Q8IVF5 1701 aa13.98□□□□□ -0.17
ERGIC3-219ENST00000496172 MYH14Q7Z406 1995 aaKnown RBP13.98□□□□□ -0.17
ERGIC3-219ENST00000496172 CNTNAP4Q9C0A0 1308 aa13.98□□□□□ -0.17
ERGIC3-219ENST00000496172 GNAT3A8MTJ3 354 aa13.98□□□□□ -0.17
ERGIC3-219ENST00000496172 PRKAR2BP31323 418 aa13.98□□□□□ -0.17
ERGIC3-219ENST00000496172 RC3H1Q5TC82 1133 aaKnown RBP13.98□□□□□ -0.17
ERGIC3-219ENST00000496172 SCN11AQ9UI33 1791 aa13.98□□□□□ -0.17
ERGIC3-219ENST00000496172 DALRD3Q5D0E6 543 aaKnown RBP13.97□□□□□ -0.17
ERGIC3-219ENST00000496172 SLC4A9Q96Q91 983 aa13.97□□□□□ -0.17
ERGIC3-219ENST00000496172 RSPH6AQ9H0K4 717 aa13.97□□□□□ -0.17
ERGIC3-219ENST00000496172 PARP3Q9Y6F1 533 aa13.97□□□□□ -0.17
ERGIC3-219ENST00000496172 NEFMP07197 916 aa13.96□□□□□ -0.17
ERGIC3-219ENST00000496172 TEFQ10587 303 aa13.96□□□□□ -0.17
ERGIC3-219ENST00000496172 ARHGEF1Q92888 912 aaKnown RBP13.96□□□□□ -0.17
ERGIC3-219ENST00000496172 RPS6KA4O75676 772 aa13.95□□□□□ -0.18
ERGIC3-219ENST00000496172 ZEB1P37275 1124 aaPredicted RBP13.95□□□□□ -0.18
ERGIC3-219ENST00000496172 DDX10Q13206 875 aaKnown RBP13.95□□□□□ -0.18
ERGIC3-219ENST00000496172 RALBP1Q15311 655 aa13.95□□□□□ -0.18
ERGIC3-219ENST00000496172 TTC5Q8N0Z6 440 aa13.95□□□□□ -0.18
ERGIC3-219ENST00000496172 ADAMTS7Q9UKP4 1686 aa13.95□□□□□ -0.18
ERGIC3-219ENST00000496172 MRC1P22897 1456 aa13.94□□□□□ -0.18
ERGIC3-219ENST00000496172 GLTPD2A6NH11 291 aa13.94□□□□□ -0.18
ERGIC3-219ENST00000496172 VEGFAP15692 232 aaPredicted RBP13.94□□□□□ -0.18
ERGIC3-219ENST00000496172 RFC4P35249 363 aa13.94□□□□□ -0.18
ERGIC3-219ENST00000496172 SLC39A6Q13433 755 aa13.94□□□□□ -0.18
ERGIC3-219ENST00000496172 RTF1Q92541 710 aaKnown RBP13.94□□□□□ -0.18
ERGIC3-219ENST00000496172 PHACTR3Q96KR7 559 aa13.94□□□□□ -0.18
ERGIC3-219ENST00000496172 NRXN2Q9P2S2 1712 aa13.93□□□□□ -0.18
ERGIC3-219ENST00000496172 CRKLP46109 303 aaKnown RBP13.93□□□□□ -0.18
ERGIC3-219ENST00000496172 IL17REQ8NFR9 667 aa13.93□□□□□ -0.18
ERGIC3-219ENST00000496172 PNNQ9H307 717 aaKnown RBP13.93□□□□□ -0.18
ERGIC3-219ENST00000496172 PCDH10Q9P2E7 1040 aa13.93□□□□□ -0.18
ERGIC3-219ENST00000496172 CCDC88AQ3V6T2 1871 aa13.93□□□□□ -0.18
ERGIC3-219ENST00000496172 VSIG10Q8N0Z9 540 aa13.92□□□□□ -0.18
ERGIC3-219ENST00000496172 PRDM10Q9NQV6 1147 aa13.92□□□□□ -0.18
ERGIC3-219ENST00000496172 DICER1Q9UPY3 1922 aaKnown RBP13.92□□□□□ -0.18
ERGIC3-219ENST00000496172 TJP1Q07157 1748 aa13.91□□□□□ -0.18
ERGIC3-219ENST00000496172 LMNB1P20700 586 aa13.91□□□□□ -0.18
ERGIC3-219ENST00000496172 DNAJC10Q8IXB1 793 aa13.91□□□□□ -0.18
ERGIC3-219ENST00000496172 USP42Q9H9J4 1324 aaKnown RBP13.9□□□□□ -0.18
ERGIC3-219ENST00000496172 AFDNP55196 1824 aaKnown RBP13.9□□□□□ -0.18
ERGIC3-219ENST00000496172 HTATSF1O43719 755 aaKnown RBP13.9□□□□□ -0.18
ERGIC3-219ENST00000496172 DDR1Q08345 913 aa13.9□□□□□ -0.18
ERGIC3-219ENST00000496172 CREBZFQ9NS37 354 aa13.9□□□□□ -0.18
ERGIC3-219ENST00000496172 VIRMAQ69YN4 1812 aaKnown RBP13.9□□□□□ -0.18
ERGIC3-219ENST00000496172 CEMIPQ8WUJ3 1361 aa13.89□□□□□ -0.19
ERGIC3-219ENST00000496172 BTBD11A6QL63 1104 aa13.89□□□□□ -0.19
ERGIC3-219ENST00000496172 STARD3NLO95772 234 aa13.89□□□□□ -0.19
ERGIC3-219ENST00000496172 CYP19A1P11511 503 aaPredicted RBP13.89□□□□□ -0.19
ERGIC3-219ENST00000496172 INTS5Q6P9B9 1019 aaKnown RBP13.89□□□□□ -0.19
ERGIC3-219ENST00000496172 ZNF790Q6PG37 636 aa13.89□□□□□ -0.19
ERGIC3-219ENST00000496172 TEX13AQ9BXU3 409 aaPredicted RBP13.89□□□□□ -0.19
ERGIC3-219ENST00000496172 ZPR1O75312 459 aa13.88□□□□□ -0.19
ERGIC3-219ENST00000496172 CHRNA5P30532 468 aa13.88□□□□□ -0.19
ERGIC3-219ENST00000496172 RASSF7Q02833 373 aa13.88□□□□□ -0.19
ERGIC3-219ENST00000496172 FMNL2Q96PY5 1086 aa13.88□□□□□ -0.19
ERGIC3-219ENST00000496172 MYBBP1AQ9BQG0 1328 aaKnown RBP13.88□□□□□ -0.19
ERGIC3-219ENST00000496172 MAPK8IP3Q9UPT6 1336 aa13.88□□□□□ -0.19
ERGIC3-219ENST00000496172 POTECB2RU33 542 aa13.87□□□□□ -0.19
ERGIC3-219ENST00000496172 POLRMTO00411 1230 aaKnown RBP13.87□□□□□ -0.19
ERGIC3-219ENST00000496172 FKBP8Q14318 412 aa13.87□□□□□ -0.19
ERGIC3-219ENST00000496172 MCM10Q7L590 875 aa13.87□□□□□ -0.19
ERGIC3-219ENST00000496172 CNTNAP1P78357 1384 aa13.86□□□□□ -0.19
ERGIC3-219ENST00000496172 FOXN1O15353 648 aa13.86□□□□□ -0.19
ERGIC3-219ENST00000496172 ZNF496Q96IT1 587 aaPredicted RBP13.86□□□□□ -0.19
ERGIC3-219ENST00000496172 FER1L6Q2WGJ9 1857 aa13.86□□□□□ -0.19
ERGIC3-219ENST00000496172 SOS1Q07889 1333 aaPredicted RBP13.86□□□□□ -0.19
ERGIC3-219ENST00000496172 HEG1Q9ULI3 1381 aa13.85□□□□□ -0.19
ERGIC3-219ENST00000496172 CANXP27824 592 aaKnown RBP13.85□□□□□ -0.19
ERGIC3-219ENST00000496172 TM4SF1P30408 202 aa13.85□□□□□ -0.19
ERGIC3-219ENST00000496172 NPM2Q86SE8 214 aaKnown RBP13.85□□□□□ -0.19
ERGIC3-219ENST00000496172 PLEKHF1Q96S99 279 aa13.85□□□□□ -0.19
ERGIC3-219ENST00000496172 A0A087WZG4 1122 aa13.84□□□□□ -0.19
ERGIC3-219ENST00000496172 CTCFP49711 727 aaPredicted RBP13.84□□□□□ -0.19
ERGIC3-219ENST00000496172 DCTN1Q14203 1278 aa13.84□□□□□ -0.19
ERGIC3-219ENST00000496172 NFE2L2Q16236 605 aa13.84□□□□□ -0.19
ERGIC3-219ENST00000496172 SRP68Q9UHB9 627 aaKnown RBP13.84□□□□□ -0.19
ERGIC3-219ENST00000496172 ZBTB1Q9Y2K1 713 aa13.84□□□□□ -0.19
ERGIC3-219ENST00000496172 UBR2Q8IWV8 1755 aa13.83□□□□□ -0.19
ERGIC3-219ENST00000496172 NFKBIEO00221 500 aa13.83□□□□□ -0.2
ERGIC3-219ENST00000496172 TAF7Q15545 349 aaPredicted RBP13.83□□□□□ -0.2
ERGIC3-219ENST00000496172 USPL1Q5W0Q7 1092 aa13.83□□□□□ -0.2
ERGIC3-219ENST00000496172 PNISRQ8TF01 805 aaKnown RBP13.83□□□□□ -0.2
ERGIC3-219ENST00000496172 MKRN1Q9UHC7 482 aaKnown RBP13.83□□□□□ -0.2
ERGIC3-219ENST00000496172 NARFQ9UHQ1 456 aa13.83□□□□□ -0.2
ERGIC3-219ENST00000496172 SIPA1L3O60292 1781 aaPredicted RBP13.83□□□□□ -0.2
ERGIC3-219ENST00000496172 SCN4AP35499 1836 aa13.83□□□□□ -0.2
ERGIC3-219ENST00000496172 COL15A1P39059 1388 aa13.83□□□□□ -0.2
ERGIC3-219ENST00000496172 KCNQ3O43525 872 aa13.82□□□□□ -0.2
ERGIC3-219ENST00000496172 SNRPA1P09661 255 aaKnown RBP13.82□□□□□ -0.2
ERGIC3-219ENST00000496172 WDR43Q15061 677 aaKnown RBP eCLIP13.82□□□□□ -0.2
ERGIC3-219ENST00000496172 CHADLQ6NUI6 762 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms