RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 NIFKQ9BYG3 293 aaKnown RBP9.22□□□□□ -0.93
SSR3-208ENST00000496050 FHDC1Q9C0D6 1143 aaPredicted RBP9.22□□□□□ -0.93
SSR3-208ENST00000496050 ZNF232Q9UNY5 417 aa9.22□□□□□ -0.93
SSR3-208ENST00000496050 UPP2O95045 317 aa9.21□□□□□ -0.94
SSR3-208ENST00000496050 NPR3P17342 541 aa9.21□□□□□ -0.94
SSR3-208ENST00000496050 GPC1P35052 558 aa9.21□□□□□ -0.94
SSR3-208ENST00000496050 RBM25P49756 843 aaKnown RBP9.21□□□□□ -0.94
SSR3-208ENST00000496050 MTMR3Q13615 1198 aa9.21□□□□□ -0.94
SSR3-208ENST00000496050 ECM1Q16610 540 aa9.2□□□□□ -0.94
SSR3-208ENST00000496050 SLC27A3Q5K4L6 730 aa9.2□□□□□ -0.94
SSR3-208ENST00000496050 COX20Q5RI15 118 aa9.2□□□□□ -0.94
SSR3-208ENST00000496050 ALKBH2Q6NS38 261 aa9.2□□□□□ -0.94
SSR3-208ENST00000496050 DNAJC14Q6Y2X3 702 aaPredicted RBP9.2□□□□□ -0.94
SSR3-208ENST00000496050 MEIOBQ8N635 442 aa9.2□□□□□ -0.94
SSR3-208ENST00000496050 HPS1Q92902 700 aa9.2□□□□□ -0.94
SSR3-208ENST00000496050 L3MBTL2Q969R5 705 aa9.2□□□□□ -0.94
SSR3-208ENST00000496050 SAP130Q9H0E3 1048 aa9.2□□□□□ -0.94
SSR3-208ENST00000496050 STIM2Q9P246 746 aa9.2□□□□□ -0.94
SSR3-208ENST00000496050 CAPN5O15484 640 aaPredicted RBP9.19□□□□□ -0.94
SSR3-208ENST00000496050 ARHGAP4P98171 946 aa9.19□□□□□ -0.94
SSR3-208ENST00000496050 GNASQ5JWF2 1037 aa9.19□□□□□ -0.94
SSR3-208ENST00000496050 POTEAQ6S8J7 498 aa9.19□□□□□ -0.94
SSR3-208ENST00000496050 TRIM67Q6ZTA4 783 aa9.19□□□□□ -0.94
SSR3-208ENST00000496050 ZSCAN29Q8IWY8 852 aaPredicted RBP9.19□□□□□ -0.94
SSR3-208ENST00000496050 MYO19Q96H55 970 aa9.19□□□□□ -0.94
SSR3-208ENST00000496050 GRIP2Q9C0E4 1043 aa9.19□□□□□ -0.94
SSR3-208ENST00000496050 DCTN4Q9UJW0 460 aa9.19□□□□□ -0.94
SSR3-208ENST00000496050 HCN4Q9Y3Q4 1203 aa9.19□□□□□ -0.94
SSR3-208ENST00000496050 USP3Q9Y6I4 520 aa9.19□□□□□ -0.94
SSR3-208ENST00000496050 EML1O00423 815 aa9.18□□□□□ -0.94
SSR3-208ENST00000496050 RGS20O76081 388 aa9.18□□□□□ -0.94
SSR3-208ENST00000496050 MAPK1P28482 360 aa9.18□□□□□ -0.94
SSR3-208ENST00000496050 RNF144AP50876 292 aaPredicted RBP9.18□□□□□ -0.94
SSR3-208ENST00000496050 HIRAP54198 1017 aaPredicted RBP9.18□□□□□ -0.94
SSR3-208ENST00000496050 AAMPQ13685 434 aa9.18□□□□□ -0.94
SSR3-208ENST00000496050 NOM1Q5C9Z4 860 aaKnown RBP9.18□□□□□ -0.94
SSR3-208ENST00000496050 RHBDD1Q8TEB9 315 aa9.18□□□□□ -0.94
SSR3-208ENST00000496050 NGLY1Q96IV0 654 aa9.18□□□□□ -0.94
SSR3-208ENST00000496050 BRD2P25440 801 aaKnown RBP9.17□□□□□ -0.94
SSR3-208ENST00000496050 ALDH16A1Q8IZ83 802 aa9.17□□□□□ -0.94
SSR3-208ENST00000496050 ANKRD33BA6NCL7 494 aa9.16□□□□□ -0.94
SSR3-208ENST00000496050 E9PSI1 815 aa9.16□□□□□ -0.94
SSR3-208ENST00000496050 SPINT1O43278 529 aa9.16□□□□□ -0.94
SSR3-208ENST00000496050 MPSTP25325 297 aa9.16□□□□□ -0.94
SSR3-208ENST00000496050 C11orf91Q3C1V1 193 aa9.16□□□□□ -0.94
SSR3-208ENST00000496050 C1orf53Q5VUE5 145 aa9.16□□□□□ -0.94
SSR3-208ENST00000496050 ABTB2Q8N961 1025 aa9.16□□□□□ -0.94
SSR3-208ENST00000496050 ZDHHC1Q8WTX9 485 aa9.16□□□□□ -0.94
SSR3-208ENST00000496050 PARP3Q9Y6F1 533 aa9.16□□□□□ -0.94
SSR3-208ENST00000496050 RBM47A0AV96 593 aaKnown RBP9.15□□□□□ -0.94
SSR3-208ENST00000496050 RTN1Q16799 776 aa9.15□□□□□ -0.94
SSR3-208ENST00000496050 ZNF295-AS1Q8N0V1 137 aa9.15□□□□□ -0.94
SSR3-208ENST00000496050 ASB16Q96NS5 453 aa9.15□□□□□ -0.94
SSR3-208ENST00000496050 CITED4Q96RK1 184 aa9.15□□□□□ -0.94
SSR3-208ENST00000496050 INSM2Q96T92 566 aaPredicted RBP9.15□□□□□ -0.94
SSR3-208ENST00000496050 QTRT2Q9H974 415 aaKnown RBP9.15□□□□□ -0.94
SSR3-208ENST00000496050 POLMQ9NP87 494 aaPredicted RBP9.15□□□□□ -0.94
SSR3-208ENST00000496050 BRPF3Q9ULD4 1205 aa9.15□□□□□ -0.94
SSR3-208ENST00000496050 LRFN2Q9ULH4 789 aa9.15□□□□□ -0.94
SSR3-208ENST00000496050 PDZRN3Q9UPQ7 1066 aa9.15□□□□□ -0.94
SSR3-208ENST00000496050 NDUFB5O43674 189 aa9.14□□□□□ -0.95
SSR3-208ENST00000496050 ZNF428Q96B54 188 aa9.14□□□□□ -0.95
SSR3-208ENST00000496050 PHACTR1Q9C0D0 580 aa9.14□□□□□ -0.95
SSR3-208ENST00000496050 BMP2P12643 396 aa9.13□□□□□ -0.95
SSR3-208ENST00000496050 EIF1AXP47813 144 aaKnown RBP9.13□□□□□ -0.95
SSR3-208ENST00000496050 SH3PXD2AQ5TCZ1 1133 aa9.13□□□□□ -0.95
SSR3-208ENST00000496050 LINC00528Q8N1L1 170 aa9.13□□□□□ -0.95
SSR3-208ENST00000496050 AIDAQ96BJ3 306 aa9.13□□□□□ -0.95
SSR3-208ENST00000496050 TNFRSF10BO14763 440 aa9.12□□□□□ -0.95
SSR3-208ENST00000496050 C4orf17Q53FE4 359 aa9.12□□□□□ -0.95
SSR3-208ENST00000496050 IFT43Q96FT9 208 aa9.12□□□□□ -0.95
SSR3-208ENST00000496050 BCL2L13Q9BXK5 485 aa9.12□□□□□ -0.95
SSR3-208ENST00000496050 SPATA31C2B4DYI2 1134 aa9.11□□□□□ -0.95
SSR3-208ENST00000496050 CTSOP43234 321 aaPredicted RBP9.11□□□□□ -0.95
SSR3-208ENST00000496050 DGKZQ13574 1117 aa9.11□□□□□ -0.95
SSR3-208ENST00000496050 SCARF1Q14162 830 aa9.11□□□□□ -0.95
SSR3-208ENST00000496050 HIF1AQ16665 826 aa9.11□□□□□ -0.95
SSR3-208ENST00000496050 NBPF1Q3BBV0 1214 aa9.11□□□□□ -0.95
SSR3-208ENST00000496050 ZNF326Q5BKZ1 582 aaKnown RBP9.11□□□□□ -0.95
SSR3-208ENST00000496050 WDR44Q5JSH3 913 aa9.11□□□□□ -0.95
SSR3-208ENST00000496050 TMC1Q8TDI8 760 aa9.11□□□□□ -0.95
SSR3-208ENST00000496050 RBCK1Q9BYM8 510 aa9.11□□□□□ -0.95
SSR3-208ENST00000496050 PLA2G4AP47712 749 aa9.1□□□□□ -0.95
SSR3-208ENST00000496050 COL19A1Q14993 1142 aa9.1□□□□□ -0.95
SSR3-208ENST00000496050 C6orf118Q5T5N4 469 aa9.1□□□□□ -0.95
SSR3-208ENST00000496050 MRPL14Q6P1L8 145 aaKnown RBP9.1□□□□□ -0.95
SSR3-208ENST00000496050 NPAS4Q8IUM7 802 aa9.1□□□□□ -0.95
SSR3-208ENST00000496050 RGL4Q8IZJ4 473 aa9.1□□□□□ -0.95
SSR3-208ENST00000496050 ZDHHC3Q9NYG2 299 aa9.1□□□□□ -0.95
SSR3-208ENST00000496050 FAM187AA6NFU0 413 aa9.09□□□□□ -0.95
SSR3-208ENST00000496050 TATP17735 454 aaPredicted RBP9.09□□□□□ -0.95
SSR3-208ENST00000496050 PHKA2P46019 1235 aa9.09□□□□□ -0.95
SSR3-208ENST00000496050 POU4F2Q12837 409 aa9.09□□□□□ -0.95
SSR3-208ENST00000496050 PDE3BQ13370 1112 aa9.09□□□□□ -0.95
SSR3-208ENST00000496050 PRICKLE2Q7Z3G6 844 aa9.09□□□□□ -0.95
SSR3-208ENST00000496050 KLK14Q9P0G3 267 aa9.09□□□□□ -0.95
SSR3-208ENST00000496050 ZBTB39O15060 712 aa9.08□□□□□ -0.96
SSR3-208ENST00000496050 FZD6O60353 706 aa9.08□□□□□ -0.96
SSR3-208ENST00000496050 AVPP01185 164 aa9.08□□□□□ -0.96
SSR3-208ENST00000496050 TXLNAP40222 546 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms