RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 AMIGO3Q86WK7 504 aa16.32■□□□□ 0.2
MRPL55-233ENST00000495899 RUNDC1Q96C34 613 aa16.32■□□□□ 0.2
MRPL55-233ENST00000495899 TEX13AQ9BXU3 409 aaPredicted RBP16.32■□□□□ 0.2
MRPL55-233ENST00000495899 PHF14O94880 888 aa16.31■□□□□ 0.2
MRPL55-233ENST00000495899 DNAJC10Q8IXB1 793 aa16.31■□□□□ 0.2
MRPL55-233ENST00000495899 ZNF496Q96IT1 587 aaPredicted RBP16.31■□□□□ 0.2
MRPL55-233ENST00000495899 FMNL2Q96PY5 1086 aa16.31■□□□□ 0.2
MRPL55-233ENST00000495899 ARXQ96QS3 562 aa16.31■□□□□ 0.2
MRPL55-233ENST00000495899 KCPQ6ZWJ8 1503 aa16.3■□□□□ 0.2
MRPL55-233ENST00000495899 CYP19A1P11511 503 aaPredicted RBP16.3■□□□□ 0.2
MRPL55-233ENST00000495899 TMPOP42166 694 aaKnown RBP16.3■□□□□ 0.2
MRPL55-233ENST00000495899 RIPK4P57078 832 aa16.3■□□□□ 0.2
MRPL55-233ENST00000495899 LMOD3Q0VAK6 560 aa16.3■□□□□ 0.2
MRPL55-233ENST00000495899 INTS5Q6P9B9 1019 aaKnown RBP16.3■□□□□ 0.2
MRPL55-233ENST00000495899 PNISRQ8TF01 805 aaKnown RBP16.3■□□□□ 0.2
MRPL55-233ENST00000495899 CCDC87Q9NVE4 849 aa16.3■□□□□ 0.2
MRPL55-233ENST00000495899 HEG1Q9ULI3 1381 aa16.29■□□□□ 0.2
MRPL55-233ENST00000495899 STARD3NLO95772 234 aa16.29■□□□□ 0.2
MRPL55-233ENST00000495899 ARHGEF1Q92888 912 aaKnown RBP16.29■□□□□ 0.2
MRPL55-233ENST00000495899 CICQ96RK0 1608 aaPredicted RBP16.29■□□□□ 0.2
MRPL55-233ENST00000495899 SMIM5Q71RC9 77 aa16.28■□□□□ 0.2
MRPL55-233ENST00000495899 RFC4P35249 363 aa16.27■□□□□ 0.2
MRPL55-233ENST00000495899 CCDC146Q8IYE0 955 aa16.27■□□□□ 0.2
MRPL55-233ENST00000495899 TUBGCP6Q96RT7 1819 aa16.26■□□□□ 0.19
MRPL55-233ENST00000495899 KCNQ3O43525 872 aa16.26■□□□□ 0.19
MRPL55-233ENST00000495899 NLGN1Q8N2Q7 840 aa16.26■□□□□ 0.19
MRPL55-233ENST00000495899 BABAM1Q9NWV8 329 aa16.26■□□□□ 0.19
MRPL55-233ENST00000495899 COL5A3P25940 1745 aaPredicted RBP16.25■□□□□ 0.19
MRPL55-233ENST00000495899 UBR3Q6ZT12 1888 aa16.25■□□□□ 0.19
MRPL55-233ENST00000495899 SNRPA1P09661 255 aaKnown RBP16.25■□□□□ 0.19
MRPL55-233ENST00000495899 MSL1Q68DK7 614 aa16.25■□□□□ 0.19
MRPL55-233ENST00000495899 SYT17Q9BSW7 474 aa16.25■□□□□ 0.19
MRPL55-233ENST00000495899 FHDC1Q9C0D6 1143 aaPredicted RBP16.25■□□□□ 0.19
MRPL55-233ENST00000495899 SIPA1L3O60292 1781 aaPredicted RBP16.25■□□□□ 0.19
MRPL55-233ENST00000495899 UBR2Q8IWV8 1755 aa16.24■□□□□ 0.19
MRPL55-233ENST00000495899 CCDC184Q52MB2 194 aa16.24■□□□□ 0.19
MRPL55-233ENST00000495899 THUMPD2Q9BTF0 503 aaKnown RBP16.24■□□□□ 0.19
MRPL55-233ENST00000495899 TJP1Q07157 1748 aa16.24■□□□□ 0.19
MRPL55-233ENST00000495899 COL24A1Q17RW2 1714 aa16.24■□□□□ 0.19
MRPL55-233ENST00000495899 VIRMAQ69YN4 1812 aaKnown RBP16.24■□□□□ 0.19
MRPL55-233ENST00000495899 SOS1Q07889 1333 aaPredicted RBP16.23■□□□□ 0.19
MRPL55-233ENST00000495899 NEUROD2Q15784 382 aa16.23■□□□□ 0.19
MRPL55-233ENST00000495899 MRS2Q9HD23 443 aa16.23■□□□□ 0.19
MRPL55-233ENST00000495899 MIS18AQ9NYP9 233 aa16.23■□□□□ 0.19
MRPL55-233ENST00000495899 ZBTB1Q9Y2K1 713 aa16.23■□□□□ 0.19
MRPL55-233ENST00000495899 RRP7AQ9Y3A4 280 aaKnown RBP16.23■□□□□ 0.19
MRPL55-233ENST00000495899 GYS1P13807 737 aa16.22■□□□□ 0.19
MRPL55-233ENST00000495899 EIF5P55010 431 aaKnown RBP16.22■□□□□ 0.19
MRPL55-233ENST00000495899 REM2Q8IYK8 340 aaPredicted RBP16.22■□□□□ 0.19
MRPL55-233ENST00000495899 SPDYE1Q8NFV5 336 aaPredicted RBP16.22■□□□□ 0.19
MRPL55-233ENST00000495899 TRIM35Q9UPQ4 493 aa16.22■□□□□ 0.19
MRPL55-233ENST00000495899 USP42Q9H9J4 1324 aaKnown RBP16.21■□□□□ 0.19
MRPL55-233ENST00000495899 A0A087WZG4 1122 aa16.21■□□□□ 0.19
MRPL55-233ENST00000495899 ZPR1O75312 459 aa16.21■□□□□ 0.19
MRPL55-233ENST00000495899 CANXP27824 592 aaKnown RBP16.21■□□□□ 0.19
MRPL55-233ENST00000495899 IL6STP40189 918 aaPredicted RBP16.21■□□□□ 0.19
MRPL55-233ENST00000495899 USP16Q9Y5T5 823 aa16.21■□□□□ 0.19
MRPL55-233ENST00000495899 APAF1O14727 1248 aa16.2■□□□□ 0.18
MRPL55-233ENST00000495899 EIF4A1P60842 406 aaKnown RBP16.2■□□□□ 0.18
MRPL55-233ENST00000495899 NARFQ9UHQ1 456 aa16.2■□□□□ 0.18
MRPL55-233ENST00000495899 CD2APQ9Y5K6 639 aa16.2■□□□□ 0.18
MRPL55-233ENST00000495899 MYH14Q7Z406 1995 aaKnown RBP16.19■□□□□ 0.18
MRPL55-233ENST00000495899 COL15A1P39059 1388 aa16.19■□□□□ 0.18
MRPL55-233ENST00000495899 GIGYF1O75420 1035 aaPredicted RBP16.19■□□□□ 0.18
MRPL55-233ENST00000495899 MMP10P09238 476 aa16.19■□□□□ 0.18
MRPL55-233ENST00000495899 NPM2Q86SE8 214 aaKnown RBP16.19■□□□□ 0.18
MRPL55-233ENST00000495899 IFNLR1Q8IU57 520 aaPredicted RBP16.19■□□□□ 0.18
MRPL55-233ENST00000495899 TSPYL4Q9UJ04 414 aa16.19■□□□□ 0.18
MRPL55-233ENST00000495899 CHL1O00533 1208 aa16.18■□□□□ 0.18
MRPL55-233ENST00000495899 A1BGP04217 495 aa16.18■□□□□ 0.18
MRPL55-233ENST00000495899 CALD1Q05682 793 aaKnown RBP16.18■□□□□ 0.18
MRPL55-233ENST00000495899 SRP68Q9UHB9 627 aaKnown RBP16.18■□□□□ 0.18
MRPL55-233ENST00000495899 DLG5Q8TDM6 1919 aa16.17■□□□□ 0.18
MRPL55-233ENST00000495899 PRAMEF22A3QJZ6 481 aa16.17■□□□□ 0.18
MRPL55-233ENST00000495899 USPL1Q5W0Q7 1092 aa16.17■□□□□ 0.18
MRPL55-233ENST00000495899 KLHL34Q8N239 644 aa16.16■□□□□ 0.18
MRPL55-233ENST00000495899 PARP3Q9Y6F1 533 aa16.16■□□□□ 0.18
MRPL55-233ENST00000495899 TM4SF1P30408 202 aa16.15■□□□□ 0.18
MRPL55-233ENST00000495899 PLCD3Q8N3E9 789 aa16.15■□□□□ 0.18
MRPL55-233ENST00000495899 CFAP44Q96MT7 982 aa16.15■□□□□ 0.18
MRPL55-233ENST00000495899 CCDC27Q2M243 656 aa16.14■□□□□ 0.17
MRPL55-233ENST00000495899 NBPF26B4DH59 902 aa16.13■□□□□ 0.17
MRPL55-233ENST00000495899 RGL2O15211 777 aa16.13■□□□□ 0.17
MRPL55-233ENST00000495899 NBPF10Q6P3W6 841 aaKnown RBP16.13■□□□□ 0.17
MRPL55-233ENST00000495899 MIER1Q8N108 512 aa16.13■□□□□ 0.17
MRPL55-233ENST00000495899 NBPF15Q8N660 670 aa16.13■□□□□ 0.17
MRPL55-233ENST00000495899 BCL2L12Q9HB09 334 aa16.13■□□□□ 0.17
MRPL55-233ENST00000495899 TBC1D2BQ9UPU7 963 aa16.13■□□□□ 0.17
MRPL55-233ENST00000495899 ZNF330Q9Y3S2 320 aaPredicted RBP16.13■□□□□ 0.17
MRPL55-233ENST00000495899 ZNF853P0CG23 659 aa16.12■□□□□ 0.17
MRPL55-233ENST00000495899 NLGN2Q8NFZ4 835 aa16.12■□□□□ 0.17
MRPL55-233ENST00000495899 IFT57Q9NWB7 429 aa16.12■□□□□ 0.17
MRPL55-233ENST00000495899 CLEC11AQ9Y240 323 aa16.12■□□□□ 0.17
MRPL55-233ENST00000495899 LAS1LQ9Y4W2 734 aaKnown RBP16.12■□□□□ 0.17
MRPL55-233ENST00000495899 KDM3BQ7LBC6 1761 aa16.12■□□□□ 0.17
MRPL55-233ENST00000495899 ERBB4Q15303 1308 aa16.12■□□□□ 0.17
MRPL55-233ENST00000495899 C4AP0C0L4 1744 aa16.11■□□□□ 0.17
MRPL55-233ENST00000495899 POLRMTO00411 1230 aaKnown RBP16.11■□□□□ 0.17
MRPL55-233ENST00000495899 TGFB2P61812 414 aa16.11■□□□□ 0.17
MRPL55-233ENST00000495899 GNAI1P63096 354 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms