RNA–Protein interactions for RNA: ENST00000495794.5

BRD9-213, Transcript of bromodomain containing 9, humanhuman

TSL 2

Gene BRD9, Length 4,865 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-213ENST00000495794 HMGB1P09429 215 aaKnown RBP16.35■□□□□ 0.21
BRD9-213ENST00000495794 TSHZ3Q63HK5 1081 aa16.35■□□□□ 0.21
BRD9-213ENST00000495794 KRT28Q7Z3Y7 464 aa16.35■□□□□ 0.21
BRD9-213ENST00000495794 POLKQ9UBT6 870 aa16.35■□□□□ 0.21
BRD9-213ENST00000495794 TRAPPC8Q9Y2L5 1435 aa16.35■□□□□ 0.21
BRD9-213ENST00000495794 CDR1P51861 262 aa16.34■□□□□ 0.21
BRD9-213ENST00000495794 CCDC183Q5T5S1 534 aa16.34■□□□□ 0.21
BRD9-213ENST00000495794 IFNL2Q8IZJ0 200 aa16.34■□□□□ 0.21
BRD9-213ENST00000495794 C8orf58Q8NAV2 365 aa16.34■□□□□ 0.21
BRD9-213ENST00000495794 ERCC4Q92889 916 aaPredicted RBP16.34■□□□□ 0.21
BRD9-213ENST00000495794 CARD14Q9BXL6 1004 aa16.34■□□□□ 0.21
BRD9-213ENST00000495794 PRM3Q9NNZ6 103 aa16.34■□□□□ 0.21
BRD9-213ENST00000495794 LARP6Q9BRS8 491 aaKnown RBP16.34■□□□□ 0.21
BRD9-213ENST00000495794 NAPBQ9H115 298 aa16.34■□□□□ 0.21
BRD9-213ENST00000495794 ANKRD44Q8N8A2 993 aa16.33■□□□□ 0.21
BRD9-213ENST00000495794 ZBTB3Q9H5J0 574 aa16.33■□□□□ 0.21
BRD9-213ENST00000495794 UBE3BQ7Z3V4 1068 aa16.33■□□□□ 0.2
BRD9-213ENST00000495794 SDSP20132 328 aa16.33■□□□□ 0.2
BRD9-213ENST00000495794 SMTNL1A8MU46 457 aa16.33■□□□□ 0.2
BRD9-213ENST00000495794 RHPN1Q8TCX5 695 aa16.33■□□□□ 0.2
BRD9-213ENST00000495794 C8orf76Q96K31 380 aa16.33■□□□□ 0.2
BRD9-213ENST00000495794 TRMT112Q9UI30 125 aaKnown RBP16.33■□□□□ 0.2
BRD9-213ENST00000495794 TTC21AQ8NDW8 1320 aa16.32■□□□□ 0.2
BRD9-213ENST00000495794 HSP90AB3PQ58FF7 597 aa16.32■□□□□ 0.2
BRD9-213ENST00000495794 TNRQ92752 1358 aa16.32■□□□□ 0.2
BRD9-213ENST00000495794 BAG4O95429 457 aaKnown RBP16.32■□□□□ 0.2
BRD9-213ENST00000495794 ODF2Q5BJF6 829 aa16.32■□□□□ 0.2
BRD9-213ENST00000495794 ZNF652Q9Y2D9 606 aa16.32■□□□□ 0.2
BRD9-213ENST00000495794 ASXL2Q76L83 1435 aa16.32■□□□□ 0.2
BRD9-213ENST00000495794 MINDY4BA8MYZ0 360 aa16.31■□□□□ 0.2
BRD9-213ENST00000495794 ATP5J2-PTCD1G3V325 749 aa16.31■□□□□ 0.2
BRD9-213ENST00000495794 MAP3K12Q12852 859 aa16.31■□□□□ 0.2
BRD9-213ENST00000495794 FAM177A1Q8N128 213 aaPredicted RBP16.31■□□□□ 0.2
BRD9-213ENST00000495794 GDPD2Q9HCC8 539 aa16.31■□□□□ 0.2
BRD9-213ENST00000495794 MRPL50Q8N5N7 158 aaKnown RBP16.31■□□□□ 0.2
BRD9-213ENST00000495794 MAGI3Q5TCQ9 1506 aa16.31■□□□□ 0.2
BRD9-213ENST00000495794 ZNF213O14771 459 aa16.31■□□□□ 0.2
BRD9-213ENST00000495794 RLBP1P12271 317 aa16.31■□□□□ 0.2
BRD9-213ENST00000495794 ANKRD24Q8TF21 1146 aa16.31■□□□□ 0.2
BRD9-213ENST00000495794 ARHGEF12Q9NZN5 1544 aa16.31■□□□□ 0.2
BRD9-213ENST00000495794 PIBF1Q8WXW3 757 aa16.31■□□□□ 0.2
BRD9-213ENST00000495794 ZHX3Q9H4I2 956 aa16.31■□□□□ 0.2
BRD9-213ENST00000495794 TNNQ9UQP3 1299 aa16.31■□□□□ 0.2
BRD9-213ENST00000495794 CCDC196A0A1B0GTZ2 297 aa16.3■□□□□ 0.2
BRD9-213ENST00000495794 GUCY1B3Q02153 619 aa16.3■□□□□ 0.2
BRD9-213ENST00000495794 PDE1AP54750 535 aa16.3■□□□□ 0.2
BRD9-213ENST00000495794 EIF4A2Q14240 407 aaKnown RBP16.3■□□□□ 0.2
BRD9-213ENST00000495794 CFAP100Q494V2 611 aa16.3■□□□□ 0.2
BRD9-213ENST00000495794 STX6O43752 255 aa16.3■□□□□ 0.2
BRD9-213ENST00000495794 PIK3C2GO75747 1445 aa16.3■□□□□ 0.2
BRD9-213ENST00000495794 CAVIN4Q5BKX8 364 aa16.3■□□□□ 0.2
BRD9-213ENST00000495794 ZFYVE27Q5T4F4 411 aa16.3■□□□□ 0.2
BRD9-213ENST00000495794 UQCRHLA0A096LP55 91 aa16.29■□□□□ 0.2
BRD9-213ENST00000495794 UQCRHP07919 91 aa16.29■□□□□ 0.2
BRD9-213ENST00000495794 ANO10Q9NW15 660 aa16.29■□□□□ 0.2
BRD9-213ENST00000495794 ZRANB1Q9UGI0 708 aa16.29■□□□□ 0.2
BRD9-213ENST00000495794 GOLIM4O00461 696 aa16.29■□□□□ 0.2
BRD9-213ENST00000495794 C8orf34Q49A92 452 aa16.29■□□□□ 0.2
BRD9-213ENST00000495794 CEP131Q9UPN4 1083 aa16.29■□□□□ 0.2
BRD9-213ENST00000495794 UHRF1BP1LA0JNW5 1464 aa16.29■□□□□ 0.2
BRD9-213ENST00000495794 RRP9O43818 475 aaKnown RBP16.29■□□□□ 0.2
BRD9-213ENST00000495794 VAMP4O75379 141 aa16.29■□□□□ 0.2
BRD9-213ENST00000495794 ANKRD13DQ6ZTN6 518 aa16.29■□□□□ 0.2
BRD9-213ENST00000495794 TFIP11Q9UBB9 837 aaKnown RBP16.29■□□□□ 0.2
BRD9-213ENST00000495794 ANKRD18BA2A2Z9 1011 aa16.29■□□□□ 0.2
BRD9-213ENST00000495794 SNRPA1P09661 255 aaKnown RBP16.29■□□□□ 0.2
BRD9-213ENST00000495794 PPIP5K1Q6PFW1 1433 aa16.28■□□□□ 0.2
BRD9-213ENST00000495794 ZNF518AQ6AHZ1 1483 aa16.28■□□□□ 0.2
BRD9-213ENST00000495794 GPTP24298 496 aa16.28■□□□□ 0.2
BRD9-213ENST00000495794 LDHAL6AQ6ZMR3 332 aa16.28■□□□□ 0.2
BRD9-213ENST00000495794 DEF6Q9H4E7 631 aa16.28■□□□□ 0.2
BRD9-213ENST00000495794 LUC7LQ9NQ29 371 aaKnown RBP16.28■□□□□ 0.2
BRD9-213ENST00000495794 BMP2KQ9NSY1 1161 aaPredicted RBP16.28■□□□□ 0.2
BRD9-213ENST00000495794 ADGRL2O95490 1459 aa16.28■□□□□ 0.2
BRD9-213ENST00000495794 SSBP05455 408 aaKnown RBP eCLIP16.28■□□□□ 0.2
BRD9-213ENST00000495794 CCDC82Q8N4S0 544 aa16.28■□□□□ 0.2
BRD9-213ENST00000495794 GJB2P29033 226 aa16.28■□□□□ 0.2
BRD9-213ENST00000495794 CCT2P78371 535 aaKnown RBP16.28■□□□□ 0.2
BRD9-213ENST00000495794 SNRKQ9NRH2 765 aa16.28■□□□□ 0.2
BRD9-213ENST00000495794 CWC25Q9NXE8 425 aaPredicted RBP16.28■□□□□ 0.2
BRD9-213ENST00000495794 CHPF2Q9P2E5 772 aa16.28■□□□□ 0.2
BRD9-213ENST00000495794 KLHL40Q2TBA0 621 aa16.27■□□□□ 0.2
BRD9-213ENST00000495794 TEX14Q8IWB6 1497 aa16.27■□□□□ 0.2
BRD9-213ENST00000495794 ZSCAN29Q8IWY8 852 aaPredicted RBP16.27■□□□□ 0.2
BRD9-213ENST00000495794 CKAP2LQ8IYA6 745 aa16.27■□□□□ 0.2
BRD9-213ENST00000495794 TSPYL6Q8N831 410 aa16.27■□□□□ 0.2
BRD9-213ENST00000495794 TMX3Q96JJ7 454 aa16.27■□□□□ 0.2
BRD9-213ENST00000495794 TANGO6Q9C0B7 1094 aa16.27■□□□□ 0.2
BRD9-213ENST00000495794 RBM5P52756 815 aaKnown RBP eCLIP16.27■□□□□ 0.195e-8■■■□□ 16
BRD9-213ENST00000495794 SFPQP23246 707 aaKnown RBP eCLIP16.27■□□□□ 0.19
BRD9-213ENST00000495794 USP25Q9UHP3 1055 aa16.27■□□□□ 0.19
BRD9-213ENST00000495794 CCDC66A2RUB6 948 aa16.26■□□□□ 0.19
BRD9-213ENST00000495794 SLC5A1P13866 664 aa16.26■□□□□ 0.19
BRD9-213ENST00000495794 PIP4K2BP78356 416 aa16.26■□□□□ 0.19
BRD9-213ENST00000495794 CHRNA2Q15822 529 aa16.26■□□□□ 0.19
BRD9-213ENST00000495794 TEX13AQ9BXU3 409 aaPredicted RBP16.26■□□□□ 0.19
BRD9-213ENST00000495794 GOLGA8BA8MQT2 603 aa16.26■□□□□ 0.19
BRD9-213ENST00000495794 AEBP2Q6ZN18 517 aaPredicted RBP16.26■□□□□ 0.19
BRD9-213ENST00000495794 PHACTR3Q96KR7 559 aa16.26■□□□□ 0.19
BRD9-213ENST00000495794 DDX19AQ9NUU7 478 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms