RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 ADAMTS13Q76LX8 1427 aa11.17□□□□□ -0.62
EPHA4-213ENST00000495693 METP08581 1390 aa11.16□□□□□ -0.62
EPHA4-213ENST00000495693 AATKQ6ZMQ8 1374 aa11.16□□□□□ -0.62
EPHA4-213ENST00000495693 HOXA2O43364 376 aa11.16□□□□□ -0.62
EPHA4-213ENST00000495693 PUS10Q3MIT2 529 aaKnown RBP11.16□□□□□ -0.62
EPHA4-213ENST00000495693 PNPLA6Q8IY17 1366 aa11.16□□□□□ -0.62
EPHA4-213ENST00000495693 MON2Q7Z3U7 1717 aa11.15□□□□□ -0.62
EPHA4-213ENST00000495693 FYB1O15117 783 aa11.15□□□□□ -0.62
EPHA4-213ENST00000495693 RGS20O76081 388 aa11.15□□□□□ -0.62
EPHA4-213ENST00000495693 B4GALNT3Q6L9W6 998 aa11.15□□□□□ -0.62
EPHA4-213ENST00000495693 TXNDC2Q86VQ3 553 aa11.15□□□□□ -0.62
EPHA4-213ENST00000495693 NUTM1Q86Y26 1132 aa11.15□□□□□ -0.62
EPHA4-213ENST00000495693 BEGAINQ9BUH8 593 aa11.15□□□□□ -0.62
EPHA4-213ENST00000495693 CABP1Q9NZU7 370 aa11.15□□□□□ -0.62
EPHA4-213ENST00000495693 DIAPH1O60610 1272 aaKnown RBP11.14□□□□□ -0.63
EPHA4-213ENST00000495693 U2AF1L5P0DN76 240 aaPredicted RBP11.14□□□□□ -0.63
EPHA4-213ENST00000495693 U2AF1Q01081 240 aaKnown RBP eCLIP11.14□□□□□ -0.63
EPHA4-213ENST00000495693 CALD1Q05682 793 aaKnown RBP11.14□□□□□ -0.63
EPHA4-213ENST00000495693 DIXDC1Q155Q3 683 aa11.14□□□□□ -0.63
EPHA4-213ENST00000495693 CCDC146Q8IYE0 955 aa11.14□□□□□ -0.63
EPHA4-213ENST00000495693 THAP11Q96EK4 314 aa11.14□□□□□ -0.63
EPHA4-213ENST00000495693 SLC27A5Q9Y2P5 690 aa11.14□□□□□ -0.63
EPHA4-213ENST00000495693 AKAP12Q02952 1782 aa11.13□□□□□ -0.63
EPHA4-213ENST00000495693 CDK12Q9NYV4 1490 aaPredicted RBP11.13□□□□□ -0.63
EPHA4-213ENST00000495693 TNNT2P45379 298 aaPredicted RBP11.13□□□□□ -0.63
EPHA4-213ENST00000495693 WWC1Q8IX03 1113 aa11.13□□□□□ -0.63
EPHA4-213ENST00000495693 NKX2-3Q8TAU0 364 aa11.13□□□□□ -0.63
EPHA4-213ENST00000495693 SPIRE2Q8WWL2 714 aa11.13□□□□□ -0.63
EPHA4-213ENST00000495693 NUDT16Q96DE0 195 aaKnown RBP11.13□□□□□ -0.63
EPHA4-213ENST00000495693 GGNBP2Q9H3C7 697 aa11.13□□□□□ -0.63
EPHA4-213ENST00000495693 COL3A1P02461 1466 aaPredicted RBP11.12□□□□□ -0.63
EPHA4-213ENST00000495693 IL16Q14005 1332 aa11.12□□□□□ -0.63
EPHA4-213ENST00000495693 CEP170BQ9Y4F5 1589 aaPredicted RBP11.12□□□□□ -0.63
EPHA4-213ENST00000495693 RIMS1Q86UR5 1692 aaKnown RBP11.12□□□□□ -0.63
EPHA4-213ENST00000495693 TOPAZ1Q8N9V7 1692 aa11.12□□□□□ -0.63
EPHA4-213ENST00000495693 ADH1BP00325 375 aa11.12□□□□□ -0.63
EPHA4-213ENST00000495693 Q3C1V9 767 aa11.12□□□□□ -0.63
EPHA4-213ENST00000495693 WAPLQ7Z5K2 1190 aa11.12□□□□□ -0.63
EPHA4-213ENST00000495693 TCP11L2Q8N4U5 519 aa11.12□□□□□ -0.63
EPHA4-213ENST00000495693 COG3Q96JB2 828 aa11.12□□□□□ -0.63
EPHA4-213ENST00000495693 ZNF142P52746 1687 aaPredicted RBP11.11□□□□□ -0.63
EPHA4-213ENST00000495693 ANKARQ7Z5J8 1434 aa11.11□□□□□ -0.63
EPHA4-213ENST00000495693 GJA5P36382 358 aa11.11□□□□□ -0.63
EPHA4-213ENST00000495693 PDE3AQ14432 1141 aa11.11□□□□□ -0.63
EPHA4-213ENST00000495693 TTC21AQ8NDW8 1320 aa11.1□□□□□ -0.63
EPHA4-213ENST00000495693 PLEKHG3A1L390 1219 aa11.1□□□□□ -0.63
EPHA4-213ENST00000495693 TCERG1O14776 1098 aaKnown RBP11.1□□□□□ -0.63
EPHA4-213ENST00000495693 TLL1O43897 1013 aa11.1□□□□□ -0.63
EPHA4-213ENST00000495693 FMNL1O95466 1100 aaPredicted RBP11.1□□□□□ -0.63
EPHA4-213ENST00000495693 LMOD3Q0VAK6 560 aa11.1□□□□□ -0.63
EPHA4-213ENST00000495693 BRICD5Q6PL45 260 aa11.1□□□□□ -0.63
EPHA4-213ENST00000495693 ROBO2Q9HCK4 1378 aa11.09□□□□□ -0.63
EPHA4-213ENST00000495693 U2SURPO15042 1029 aaKnown RBP11.09□□□□□ -0.63
EPHA4-213ENST00000495693 CANXP27824 592 aaKnown RBP11.09□□□□□ -0.63
EPHA4-213ENST00000495693 GGCXP38435 758 aa11.09□□□□□ -0.63
EPHA4-213ENST00000495693 MYT1Q01538 1121 aa11.09□□□□□ -0.63
EPHA4-213ENST00000495693 PPP1R18Q6NYC8 613 aa11.09□□□□□ -0.63
EPHA4-213ENST00000495693 ZNF428Q96B54 188 aa11.09□□□□□ -0.63
EPHA4-213ENST00000495693 SPSB2Q99619 263 aa11.09□□□□□ -0.63
EPHA4-213ENST00000495693 KDM4CQ9H3R0 1056 aa11.09□□□□□ -0.63
EPHA4-213ENST00000495693 RBM19Q9Y4C8 960 aaKnown RBP11.09□□□□□ -0.63
EPHA4-213ENST00000495693 LRRC7Q96NW7 1537 aa11.09□□□□□ -0.63
EPHA4-213ENST00000495693 FANCIQ9NVI1 1328 aa11.09□□□□□ -0.63
EPHA4-213ENST00000495693 CENPQQ7L2Z9 268 aaPredicted RBP11.08□□□□□ -0.64
EPHA4-213ENST00000495693 TBC1D2Q9BYX2 928 aa11.08□□□□□ -0.64
EPHA4-213ENST00000495693 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.08□□□□□ -0.64
EPHA4-213ENST00000495693 XRN1Q8IZH2 1706 aaKnown RBP11.08□□□□□ -0.64
EPHA4-213ENST00000495693 NRKQ7Z2Y5 1582 aa11.07□□□□□ -0.64
EPHA4-213ENST00000495693 LTKP29376 864 aa11.07□□□□□ -0.64
EPHA4-213ENST00000495693 EXOC6Q8TAG9 804 aa11.07□□□□□ -0.64
EPHA4-213ENST00000495693 MSS51Q4VC12 460 aa11.06□□□□□ -0.64
EPHA4-213ENST00000495693 ANKLE2Q86XL3 938 aa11.06□□□□□ -0.64
EPHA4-213ENST00000495693 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.06□□□□□ -0.64
EPHA4-213ENST00000495693 PLEKHF1Q96S99 279 aa11.06□□□□□ -0.64
EPHA4-213ENST00000495693 GPBP1L1Q9HC44 474 aaPredicted RBP11.06□□□□□ -0.64
EPHA4-213ENST00000495693 AMOTL2Q9Y2J4 779 aa11.06□□□□□ -0.64
EPHA4-213ENST00000495693 USP6P35125 1406 aa11.06□□□□□ -0.64
EPHA4-213ENST00000495693 KIF24Q5T7B8 1368 aa11.05□□□□□ -0.64
EPHA4-213ENST00000495693 TMPOP42166 694 aaKnown RBP11.05□□□□□ -0.64
EPHA4-213ENST00000495693 RNF19BQ6ZMZ0 732 aa11.05□□□□□ -0.64
EPHA4-213ENST00000495693 HLA-CQ95604 372 aa11.05□□□□□ -0.64
EPHA4-213ENST00000495693 CRBNQ96SW2 442 aa11.05□□□□□ -0.64
EPHA4-213ENST00000495693 SLC6A16Q9GZN6 736 aa11.05□□□□□ -0.64
EPHA4-213ENST00000495693 CHMP4BQ9H444 224 aaKnown RBP11.05□□□□□ -0.64
EPHA4-213ENST00000495693 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.05□□□□□ -0.64
EPHA4-213ENST00000495693 POLKQ9UBT6 870 aa11.05□□□□□ -0.64
EPHA4-213ENST00000495693 TTC21BQ7Z4L5 1316 aa11.05□□□□□ -0.64
EPHA4-213ENST00000495693 ADAMTSL3P82987 1691 aa11.04□□□□□ -0.64
EPHA4-213ENST00000495693 SENP3-EIF4A1A0A087X0R7 540 aa11.04□□□□□ -0.64
EPHA4-213ENST00000495693 MOXD2PA6NHM9 499 aa11.04□□□□□ -0.64
EPHA4-213ENST00000495693 FDX1P10109 184 aa11.04□□□□□ -0.64
EPHA4-213ENST00000495693 CEBPAP49715 358 aaPredicted RBP11.04□□□□□ -0.64
EPHA4-213ENST00000495693 DDRGK1Q96HY6 314 aa11.04□□□□□ -0.64
EPHA4-213ENST00000495693 USP31Q70CQ4 1352 aa11.03□□□□□ -0.64
EPHA4-213ENST00000495693 OVOS2A0A0J9YW53 1432 aa11.03□□□□□ -0.64
EPHA4-213ENST00000495693 OVOS2Q6IE36 1432 aa11.03□□□□□ -0.64
EPHA4-213ENST00000495693 PTPRUQ92729 1446 aa11.03□□□□□ -0.64
EPHA4-213ENST00000495693 SPTLC1O15269 473 aa11.03□□□□□ -0.64
EPHA4-213ENST00000495693 NEUROD2Q15784 382 aa11.03□□□□□ -0.64
EPHA4-213ENST00000495693 RSBN1LQ6PCB5 846 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms