RNA–Protein interactions for RNA: ENST00000495491.5

HCLS1-211, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 2

Gene HCLS1, Length 1,219 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-211ENST00000495491 ZBTB1Q9Y2K1 713 aa17.24■□□□□ 0.35
HCLS1-211ENST00000495491 COL15A1P39059 1388 aa17.24■□□□□ 0.35
HCLS1-211ENST00000495491 U2SURPO15042 1029 aaKnown RBP17.23■□□□□ 0.35
HCLS1-211ENST00000495491 FCHSD2O94868 740 aa17.23■□□□□ 0.35
HCLS1-211ENST00000495491 TEFQ10587 303 aa17.23■□□□□ 0.35
HCLS1-211ENST00000495491 NUDCQ9Y266 331 aa17.23■□□□□ 0.35
HCLS1-211ENST00000495491 BCS1LQ9Y276 419 aa17.23■□□□□ 0.35
HCLS1-211ENST00000495491 HEG1Q9ULI3 1381 aa17.23■□□□□ 0.35
HCLS1-211ENST00000495491 BRCA1P38398 1863 aaKnown RBP17.22■□□□□ 0.35
HCLS1-211ENST00000495491 NFIXQ14938 502 aa17.22■□□□□ 0.35
HCLS1-211ENST00000495491 USPL1Q5W0Q7 1092 aa17.22■□□□□ 0.35
HCLS1-211ENST00000495491 TTC5Q8N0Z6 440 aa17.22■□□□□ 0.35
HCLS1-211ENST00000495491 ZNF496Q96IT1 587 aaPredicted RBP17.22■□□□□ 0.35
HCLS1-211ENST00000495491 BCL2L12Q9HB09 334 aa17.22■□□□□ 0.35
HCLS1-211ENST00000495491 A0A087WZG4 1122 aa17.21■□□□□ 0.35
HCLS1-211ENST00000495491 HTATSF1O43719 755 aaKnown RBP17.21■□□□□ 0.35
HCLS1-211ENST00000495491 PPP2R1AP30153 589 aa17.21■□□□□ 0.35
HCLS1-211ENST00000495491 PHACTR3Q96KR7 559 aa17.21■□□□□ 0.35
HCLS1-211ENST00000495491 IL6STP40189 918 aaPredicted RBP17.2■□□□□ 0.34
HCLS1-211ENST00000495491 DALRD3Q5D0E6 543 aaKnown RBP17.2■□□□□ 0.34
HCLS1-211ENST00000495491 FMNL2Q96PY5 1086 aa17.2■□□□□ 0.34
HCLS1-211ENST00000495491 NRXN2Q9P2S2 1712 aa17.19■□□□□ 0.34
HCLS1-211ENST00000495491 KIF3CO14782 793 aa17.19■□□□□ 0.34
HCLS1-211ENST00000495491 RGL2O15211 777 aa17.19■□□□□ 0.34
HCLS1-211ENST00000495491 PRKAR2BP31323 418 aa17.19■□□□□ 0.34
HCLS1-211ENST00000495491 N4BP2Q86UW6 1770 aaPredicted RBP17.18■□□□□ 0.34
HCLS1-211ENST00000495491 ARHGAP27Q6ZUM4 889 aa17.18■□□□□ 0.34
HCLS1-211ENST00000495491 WWC3Q9ULE0 1092 aa17.18■□□□□ 0.34
HCLS1-211ENST00000495491 PDZRN3Q9UPQ7 1066 aa17.18■□□□□ 0.34
HCLS1-211ENST00000495491 ARFGEF1Q9Y6D6 1849 aa17.18■□□□□ 0.34
HCLS1-211ENST00000495491 SIPA1L3O60292 1781 aaPredicted RBP17.17■□□□□ 0.34
HCLS1-211ENST00000495491 ZC3H4Q9UPT8 1303 aaKnown RBP17.17■□□□□ 0.34
HCLS1-211ENST00000495491 VIRMAQ69YN4 1812 aaKnown RBP17.17■□□□□ 0.34
HCLS1-211ENST00000495491 SERPINB2P05120 415 aa17.16■□□□□ 0.34
HCLS1-211ENST00000495491 U2AF1L5P0DN76 240 aaPredicted RBP17.15■□□□□ 0.34
HCLS1-211ENST00000495491 HSPA6P17066 643 aa17.15■□□□□ 0.34
HCLS1-211ENST00000495491 CANXP27824 592 aaKnown RBP17.15■□□□□ 0.34
HCLS1-211ENST00000495491 U2AF1Q01081 240 aaKnown RBP eCLIP17.15■□□□□ 0.34
HCLS1-211ENST00000495491 BTBD11A6QL63 1104 aa17.14■□□□□ 0.33
HCLS1-211ENST00000495491 CHRNA5P30532 468 aa17.14■□□□□ 0.33
HCLS1-211ENST00000495491 C9orf131Q5VYM1 1079 aa17.13■□□□□ 0.33
HCLS1-211ENST00000495491 BRIP1Q9BX63 1249 aa17.13■□□□□ 0.33
HCLS1-211ENST00000495491 TOMM70O94826 608 aa17.12■□□□□ 0.33
HCLS1-211ENST00000495491 CAMTA2O94983 1202 aa17.12■□□□□ 0.33
HCLS1-211ENST00000495491 SNRPA1P09661 255 aaKnown RBP17.12■□□□□ 0.33
HCLS1-211ENST00000495491 CLEC4GQ6UXB4 293 aa17.12■□□□□ 0.33
HCLS1-211ENST00000495491 ZNF526Q8TF50 670 aaPredicted RBP17.12■□□□□ 0.33
HCLS1-211ENST00000495491 RTF1Q92541 710 aaKnown RBP17.12■□□□□ 0.33
HCLS1-211ENST00000495491 CARMIL3Q8ND23 1372 aa17.12■□□□□ 0.33
HCLS1-211ENST00000495491 TTLL6Q8N841 843 aa17.11■□□□□ 0.33
HCLS1-211ENST00000495491 H0YIN7 160 aa17.1■□□□□ 0.33
HCLS1-211ENST00000495491 KCNQ3O43525 872 aa17.1■□□□□ 0.33
HCLS1-211ENST00000495491 A1BGP04217 495 aa17.1■□□□□ 0.33
HCLS1-211ENST00000495491 TBC1D9BQ66K14 1250 aa17.1■□□□□ 0.33
HCLS1-211ENST00000495491 AFDNP55196 1824 aaKnown RBP17.1■□□□□ 0.33
HCLS1-211ENST00000495491 SCN7AQ01118 1682 aa17.09■□□□□ 0.33
HCLS1-211ENST00000495491 KDM2BQ8NHM5 1336 aa17.08■□□□□ 0.32
HCLS1-211ENST00000495491 PDE6BP35913 854 aa17.08■□□□□ 0.32
HCLS1-211ENST00000495491 CNGB1Q14028 1251 aaPredicted RBP17.08■□□□□ 0.32
HCLS1-211ENST00000495491 TAF7Q15545 349 aaPredicted RBP17.08■□□□□ 0.32
HCLS1-211ENST00000495491 PRR5LQ6MZQ0 368 aa17.08■□□□□ 0.32
HCLS1-211ENST00000495491 C2CD5Q86YS7 1000 aa17.08■□□□□ 0.32
HCLS1-211ENST00000495491 RBM46Q8TBY0 533 aaKnown RBP17.08■□□□□ 0.32
HCLS1-211ENST00000495491 PLEKHF1Q96S99 279 aa17.08■□□□□ 0.32
HCLS1-211ENST00000495491 TBC1D2BQ9UPU7 963 aa17.08■□□□□ 0.32
HCLS1-211ENST00000495491 USP16Q9Y5T5 823 aa17.08■□□□□ 0.32
HCLS1-211ENST00000495491 DLEC1Q9Y238 1755 aa17.07■□□□□ 0.32
HCLS1-211ENST00000495491 LMNB1P20700 586 aa17.07■□□□□ 0.32
HCLS1-211ENST00000495491 MCM10Q7L590 875 aa17.07■□□□□ 0.32
HCLS1-211ENST00000495491 NPM2Q86SE8 214 aaKnown RBP17.07■□□□□ 0.32
HCLS1-211ENST00000495491 PNISRQ8TF01 805 aaKnown RBP17.07■□□□□ 0.32
HCLS1-211ENST00000495491 SETDB2Q96T68 719 aa17.07■□□□□ 0.32
HCLS1-211ENST00000495491 RNF181Q9P0P0 153 aa17.07■□□□□ 0.32
HCLS1-211ENST00000495491 KLRG2A4D1S0 409 aaPredicted RBP17.06■□□□□ 0.32
HCLS1-211ENST00000495491 DZIP3Q86Y13 1208 aaKnown RBP17.06■□□□□ 0.32
HCLS1-211ENST00000495491 PNNQ9H307 717 aaKnown RBP17.06■□□□□ 0.32
HCLS1-211ENST00000495491 NMRK2Q9NPI5 230 aa17.06■□□□□ 0.32
HCLS1-211ENST00000495491 LTBP3Q9NS15 1303 aa17.05■□□□□ 0.32
HCLS1-211ENST00000495491 APLP1P51693 650 aa17.05■□□□□ 0.32
HCLS1-211ENST00000495491 FSTL1Q12841 308 aa17.05■□□□□ 0.32
HCLS1-211ENST00000495491 ZNF652Q9Y2D9 606 aa17.05■□□□□ 0.32
HCLS1-211ENST00000495491 NBPF26B4DH59 902 aa17.04■□□□□ 0.32
HCLS1-211ENST00000495491 NFKBIEO00221 500 aa17.04■□□□□ 0.32
HCLS1-211ENST00000495491 STYK1Q6J9G0 422 aa17.04■□□□□ 0.32
HCLS1-211ENST00000495491 NBPF10Q6P3W6 841 aaKnown RBP17.04■□□□□ 0.32
HCLS1-211ENST00000495491 BICDL1Q6ZP65 573 aa17.04■□□□□ 0.32
HCLS1-211ENST00000495491 NBPF15Q8N660 670 aa17.04■□□□□ 0.32
HCLS1-211ENST00000495491 CNBD1Q8NA66 436 aa17.04■□□□□ 0.32
HCLS1-211ENST00000495491 NEFMP07197 916 aa17.03■□□□□ 0.32
HCLS1-211ENST00000495491 PRELPP51888 382 aa17.03■□□□□ 0.32
HCLS1-211ENST00000495491 SBF1O95248 1867 aa17.03■□□□□ 0.32
HCLS1-211ENST00000495491 PRAMEF22A3QJZ6 481 aa17.02■□□□□ 0.32
HCLS1-211ENST00000495491 SRGNP10124 158 aa17.02■□□□□ 0.32
HCLS1-211ENST00000495491 DCTN1Q14203 1278 aa17.02■□□□□ 0.32
HCLS1-211ENST00000495491 RALBP1Q15311 655 aa17.02■□□□□ 0.32
HCLS1-211ENST00000495491 NFE2L2Q16236 605 aa17.02■□□□□ 0.32
HCLS1-211ENST00000495491 CNKSR1Q969H4 720 aa17.02■□□□□ 0.32
HCLS1-211ENST00000495491 GLTPD2A6NH11 291 aa17.01■□□□□ 0.31
HCLS1-211ENST00000495491 ST5P78524 1137 aa17.01■□□□□ 0.31
HCLS1-211ENST00000495491 SOGA3Q5TF21 947 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms