RNA–Protein interactions for RNA: ENST00000495465.6

RAPGEF3-214, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-214ENST00000495465 TM4SF1P30408 202 aa19.51■□□□□ 0.71
RAPGEF3-214ENST00000495465 FMNL2Q96PY5 1086 aa19.51■□□□□ 0.71
RAPGEF3-214ENST00000495465 NARFQ9UHQ1 456 aa19.51■□□□□ 0.71
RAPGEF3-214ENST00000495465 BCS1LQ9Y276 419 aa19.51■□□□□ 0.71
RAPGEF3-214ENST00000495465 COL15A1P39059 1388 aa19.51■□□□□ 0.71
RAPGEF3-214ENST00000495465 CEMIPQ8WUJ3 1361 aa19.51■□□□□ 0.71
RAPGEF3-214ENST00000495465 HEG1Q9ULI3 1381 aa19.5■□□□□ 0.71
RAPGEF3-214ENST00000495465 DCTN1Q14203 1278 aa19.5■□□□□ 0.71
RAPGEF3-214ENST00000495465 TEX13AQ9BXU3 409 aaPredicted RBP19.5■□□□□ 0.71
RAPGEF3-214ENST00000495465 C4AP0C0L4 1744 aa19.5■□□□□ 0.71
RAPGEF3-214ENST00000495465 POLRMTO00411 1230 aaKnown RBP19.49■□□□□ 0.71
RAPGEF3-214ENST00000495465 ZNF330Q9Y3S2 320 aaPredicted RBP19.49■□□□□ 0.71
RAPGEF3-214ENST00000495465 VIRMAQ69YN4 1812 aaKnown RBP19.48■□□□□ 0.71
RAPGEF3-214ENST00000495465 EIF5P55010 431 aaKnown RBP19.48■□□□□ 0.71
RAPGEF3-214ENST00000495465 NFIXQ14938 502 aa19.48■□□□□ 0.71
RAPGEF3-214ENST00000495465 KCNA3P22001 575 aa19.47■□□□□ 0.71
RAPGEF3-214ENST00000495465 BCL2L12Q9HB09 334 aa19.47■□□□□ 0.71
RAPGEF3-214ENST00000495465 GIGYF1O75420 1035 aaPredicted RBP19.46■□□□□ 0.71
RAPGEF3-214ENST00000495465 A1BGP04217 495 aa19.46■□□□□ 0.71
RAPGEF3-214ENST00000495465 NEFMP07197 916 aa19.46■□□□□ 0.71
RAPGEF3-214ENST00000495465 DDX10Q13206 875 aaKnown RBP19.46■□□□□ 0.71
RAPGEF3-214ENST00000495465 ARHGAP27Q6ZUM4 889 aa19.46■□□□□ 0.71
RAPGEF3-214ENST00000495465 ATP10DQ9P241 1426 aa19.45■□□□□ 0.7
RAPGEF3-214ENST00000495465 A0A087WZG4 1122 aa19.45■□□□□ 0.7
RAPGEF3-214ENST00000495465 HTATSF1O43719 755 aaKnown RBP19.45■□□□□ 0.7
RAPGEF3-214ENST00000495465 CHRNA5P30532 468 aa19.45■□□□□ 0.7
RAPGEF3-214ENST00000495465 BICDL1Q6ZP65 573 aa19.45■□□□□ 0.7
RAPGEF3-214ENST00000495465 ZNF526Q8TF50 670 aaPredicted RBP19.45■□□□□ 0.7
RAPGEF3-214ENST00000495465 C1QTNF8P60827 252 aa19.44■□□□□ 0.7
RAPGEF3-214ENST00000495465 NPM2Q86SE8 214 aaKnown RBP19.44■□□□□ 0.7
RAPGEF3-214ENST00000495465 PIM2Q9P1W9 311 aa19.44■□□□□ 0.7
RAPGEF3-214ENST00000495465 TBC1D2BQ9UPU7 963 aa19.44■□□□□ 0.7
RAPGEF3-214ENST00000495465 UBR2Q8IWV8 1755 aa19.44■□□□□ 0.7
RAPGEF3-214ENST00000495465 N4BP2Q86UW6 1770 aaPredicted RBP19.43■□□□□ 0.7
RAPGEF3-214ENST00000495465 PRAMEF22A3QJZ6 481 aa19.43■□□□□ 0.7
RAPGEF3-214ENST00000495465 SERPINB2P05120 415 aa19.43■□□□□ 0.7
RAPGEF3-214ENST00000495465 MIS18AQ9NYP9 233 aa19.43■□□□□ 0.7
RAPGEF3-214ENST00000495465 USP16Q9Y5T5 823 aa19.43■□□□□ 0.7
RAPGEF3-214ENST00000495465 KIF13BQ9NQT8 1826 aa19.42■□□□□ 0.7
RAPGEF3-214ENST00000495465 IL6STP40189 918 aaPredicted RBP19.42■□□□□ 0.7
RAPGEF3-214ENST00000495465 PIP4K2AP48426 406 aaPredicted RBP19.42■□□□□ 0.7
RAPGEF3-214ENST00000495465 TAF7Q15545 349 aaPredicted RBP19.42■□□□□ 0.7
RAPGEF3-214ENST00000495465 DALRD3Q5D0E6 543 aaKnown RBP19.42■□□□□ 0.7
RAPGEF3-214ENST00000495465 GPBP1L1Q9HC44 474 aaPredicted RBP19.42■□□□□ 0.7
RAPGEF3-214ENST00000495465 SNRPA1P09661 255 aaKnown RBP19.41■□□□□ 0.7
RAPGEF3-214ENST00000495465 RALBP1Q15311 655 aa19.41■□□□□ 0.7
RAPGEF3-214ENST00000495465 PLEKHF1Q96S99 279 aa19.41■□□□□ 0.7
RAPGEF3-214ENST00000495465 KIAA1551Q9HCM1 1747 aa19.41■□□□□ 0.7
RAPGEF3-214ENST00000495465 SIPA1L3O60292 1781 aaPredicted RBP19.4■□□□□ 0.7
RAPGEF3-214ENST00000495465 TBC1D9BQ66K14 1250 aa19.4■□□□□ 0.7
RAPGEF3-214ENST00000495465 ADCY9O60503 1353 aa19.4■□□□□ 0.7
RAPGEF3-214ENST00000495465 NFE2L2Q16236 605 aa19.39■□□□□ 0.69
RAPGEF3-214ENST00000495465 PNNQ9H307 717 aaKnown RBP19.39■□□□□ 0.69
RAPGEF3-214ENST00000495465 THUMPD2Q9BTF0 503 aaKnown RBP19.38■□□□□ 0.69
RAPGEF3-214ENST00000495465 MAPK8IP3Q9UPT6 1336 aa19.38■□□□□ 0.69
RAPGEF3-214ENST00000495465 CEP350Q5VT06 3117 aa19.37■□□□□ 0.69
RAPGEF3-214ENST00000495465 CAMTA2O94983 1202 aa19.37■□□□□ 0.69
RAPGEF3-214ENST00000495465 DZIP3Q86Y13 1208 aaKnown RBP19.37■□□□□ 0.69
RAPGEF3-214ENST00000495465 SENP3-EIF4A1A0A087X0R7 540 aa19.36■□□□□ 0.69
RAPGEF3-214ENST00000495465 CCDC24Q8N4L8 307 aa19.36■□□□□ 0.69
RAPGEF3-214ENST00000495465 C2CD5Q86YS7 1000 aa19.35■□□□□ 0.69
RAPGEF3-214ENST00000495465 SETDB2Q96T68 719 aa19.35■□□□□ 0.69
RAPGEF3-214ENST00000495465 H0YIN7 160 aa19.34■□□□□ 0.69
RAPGEF3-214ENST00000495465 C9orf131Q5VYM1 1079 aa19.34■□□□□ 0.69
RAPGEF3-214ENST00000495465 PNISRQ8TF01 805 aaKnown RBP19.34■□□□□ 0.69
RAPGEF3-214ENST00000495465 CARMIL3Q8ND23 1372 aa19.33■□□□□ 0.69
RAPGEF3-214ENST00000495465 NBPF26B4DH59 902 aa19.33■□□□□ 0.68
RAPGEF3-214ENST00000495465 NPHP1O15259 732 aa19.33■□□□□ 0.68
RAPGEF3-214ENST00000495465 NBPF10Q6P3W6 841 aaKnown RBP19.33■□□□□ 0.68
RAPGEF3-214ENST00000495465 NBPF15Q8N660 670 aa19.33■□□□□ 0.68
RAPGEF3-214ENST00000495465 PRR5LQ6MZQ0 368 aa19.32■□□□□ 0.68
RAPGEF3-214ENST00000495465 TTLL6Q8N841 843 aa19.32■□□□□ 0.68
RAPGEF3-214ENST00000495465 MYBBP1AQ9BQG0 1328 aaKnown RBP19.31■□□□□ 0.68
RAPGEF3-214ENST00000495465 RIPK4P57078 832 aa19.31■□□□□ 0.68
RAPGEF3-214ENST00000495465 EIF4A1P60842 406 aaKnown RBP19.31■□□□□ 0.68
RAPGEF3-214ENST00000495465 BRIP1Q9BX63 1249 aa19.31■□□□□ 0.68
RAPGEF3-214ENST00000495465 AFDNP55196 1824 aaKnown RBP19.3■□□□□ 0.68
RAPGEF3-214ENST00000495465 PDE6BP35913 854 aa19.3■□□□□ 0.68
RAPGEF3-214ENST00000495465 NGEFQ8N5V2 710 aa19.3■□□□□ 0.68
RAPGEF3-214ENST00000495465 CNBD1Q8NA66 436 aa19.3■□□□□ 0.68
RAPGEF3-214ENST00000495465 ZNF622Q969S3 477 aaKnown RBP eCLIP19.3■□□□□ 0.68
RAPGEF3-214ENST00000495465 RNF181Q9P0P0 153 aa19.3■□□□□ 0.68
RAPGEF3-214ENST00000495465 BRCA1P38398 1863 aaKnown RBP19.29■□□□□ 0.68
RAPGEF3-214ENST00000495465 CLEC4GQ6UXB4 293 aa19.29■□□□□ 0.68
RAPGEF3-214ENST00000495465 CCDC146Q8IYE0 955 aa19.29■□□□□ 0.68
RAPGEF3-214ENST00000495465 ZNF652Q9Y2D9 606 aa19.29■□□□□ 0.68
RAPGEF3-214ENST00000495465 NRXN2Q9P2S2 1712 aa19.28■□□□□ 0.68
RAPGEF3-214ENST00000495465 TMPOP42166 694 aaKnown RBP19.28■□□□□ 0.68
RAPGEF3-214ENST00000495465 ST5P78524 1137 aa19.28■□□□□ 0.68
RAPGEF3-214ENST00000495465 RASSF7Q02833 373 aa19.28■□□□□ 0.68
RAPGEF3-214ENST00000495465 TSPYL4Q9UJ04 414 aa19.28■□□□□ 0.68
RAPGEF3-214ENST00000495465 RRP7AQ9Y3A4 280 aaKnown RBP19.28■□□□□ 0.68
RAPGEF3-214ENST00000495465 KIF3CO14782 793 aa19.27■□□□□ 0.68
RAPGEF3-214ENST00000495465 NEUROD2Q15784 382 aa19.27■□□□□ 0.68
RAPGEF3-214ENST00000495465 NBPF5PQ86XG9 351 aaPredicted RBP19.27■□□□□ 0.68
RAPGEF3-214ENST00000495465 ZNF219Q9P2Y4 722 aaPredicted RBP19.27■□□□□ 0.68
RAPGEF3-214ENST00000495465 SCN7AQ01118 1682 aa19.27■□□□□ 0.67
RAPGEF3-214ENST00000495465 FAM177BA6PVY3 158 aa19.26■□□□□ 0.67
RAPGEF3-214ENST00000495465 WDR43Q15061 677 aaKnown RBP eCLIP19.26■□□□□ 0.67
RAPGEF3-214ENST00000495465 HLFQ16534 295 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms