RNA–Protein interactions for RNA: ENST00000495434.1

MRPL55-232, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 224 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-232ENST00000495434 TAF7Q15545 349 aaPredicted RBP18.57■□□□□ 0.56
MRPL55-232ENST00000495434 PRKRIP1Q9H875 184 aaPredicted RBP18.57■□□□□ 0.56
MRPL55-232ENST00000495434 ZBTB1Q9Y2K1 713 aa18.57■□□□□ 0.56
MRPL55-232ENST00000495434 KIF13BQ9NQT8 1826 aa18.56■□□□□ 0.56
MRPL55-232ENST00000495434 ZPR1O75312 459 aa18.56■□□□□ 0.56
MRPL55-232ENST00000495434 DCTN1Q14203 1278 aa18.56■□□□□ 0.56
MRPL55-232ENST00000495434 COL15A1P39059 1388 aa18.55■□□□□ 0.56
MRPL55-232ENST00000495434 KCNQ3O43525 872 aa18.55■□□□□ 0.56
MRPL55-232ENST00000495434 SRP68Q9UHB9 627 aaKnown RBP18.55■□□□□ 0.56
MRPL55-232ENST00000495434 NARFQ9UHQ1 456 aa18.55■□□□□ 0.56
MRPL55-232ENST00000495434 PARP3Q9Y6F1 533 aa18.55■□□□□ 0.56
MRPL55-232ENST00000495434 GRIN3BO60391 1043 aa18.54■□□□□ 0.56
MRPL55-232ENST00000495434 EIF5P55010 431 aaKnown RBP18.54■□□□□ 0.56
MRPL55-232ENST00000495434 FKBP8Q14318 412 aa18.54■□□□□ 0.56
MRPL55-232ENST00000495434 PNISRQ8TF01 805 aaKnown RBP18.54■□□□□ 0.56
MRPL55-232ENST00000495434 A0A087WZG4 1122 aa18.53■□□□□ 0.56
MRPL55-232ENST00000495434 TM4SF1P30408 202 aa18.53■□□□□ 0.56
MRPL55-232ENST00000495434 TGFB2P61812 414 aa18.53■□□□□ 0.56
MRPL55-232ENST00000495434 USPL1Q5W0Q7 1092 aa18.53■□□□□ 0.56
MRPL55-232ENST00000495434 C10orf71Q711Q0 1435 aa18.52■□□□□ 0.56
MRPL55-232ENST00000495434 SNRPA1P09661 255 aaKnown RBP18.52■□□□□ 0.56
MRPL55-232ENST00000495434 CANXP27824 592 aaKnown RBP18.52■□□□□ 0.56
MRPL55-232ENST00000495434 IL6STP40189 918 aaPredicted RBP18.52■□□□□ 0.56
MRPL55-232ENST00000495434 PELP1Q8IZL8 1130 aaKnown RBP18.52■□□□□ 0.56
MRPL55-232ENST00000495434 YBX3P16989 372 aaKnown RBP eCLIP18.51■□□□□ 0.55
MRPL55-232ENST00000495434 WDR43Q15061 677 aaKnown RBP eCLIP18.5■□□□□ 0.55
MRPL55-232ENST00000495434 USP16Q9Y5T5 823 aa18.5■□□□□ 0.55
MRPL55-232ENST00000495434 POLRMTO00411 1230 aaKnown RBP18.49■□□□□ 0.55
MRPL55-232ENST00000495434 TMPOP42166 694 aaKnown RBP18.49■□□□□ 0.55
MRPL55-232ENST00000495434 RIPK4P57078 832 aa18.49■□□□□ 0.55
MRPL55-232ENST00000495434 DDR1Q08345 913 aa18.49■□□□□ 0.55
MRPL55-232ENST00000495434 LMOD3Q0VAK6 560 aa18.49■□□□□ 0.55
MRPL55-232ENST00000495434 KDM3BQ7LBC6 1761 aa18.48■□□□□ 0.55
MRPL55-232ENST00000495434 PXDNLA1KZ92 1463 aa18.48■□□□□ 0.55
MRPL55-232ENST00000495434 ZNF316A6NFI3 1004 aaPredicted RBP18.48■□□□□ 0.55
MRPL55-232ENST00000495434 A1BGP04217 495 aa18.48■□□□□ 0.55
MRPL55-232ENST00000495434 NPM2Q86SE8 214 aaKnown RBP18.48■□□□□ 0.55
MRPL55-232ENST00000495434 RUNDC1Q96C34 613 aa18.48■□□□□ 0.55
MRPL55-232ENST00000495434 BCL2L12Q9HB09 334 aa18.48■□□□□ 0.55
MRPL55-232ENST00000495434 KIAA1551Q9HCM1 1747 aa18.48■□□□□ 0.55
MRPL55-232ENST00000495434 BABAM1Q9NWV8 329 aa18.47■□□□□ 0.55
MRPL55-232ENST00000495434 ADAMTS8Q9UP79 889 aa18.47■□□□□ 0.55
MRPL55-232ENST00000495434 NFIXQ14938 502 aa18.46■□□□□ 0.55
MRPL55-232ENST00000495434 MIS18AQ9NYP9 233 aa18.46■□□□□ 0.55
MRPL55-232ENST00000495434 PRAMEF22A3QJZ6 481 aa18.45■□□□□ 0.54
MRPL55-232ENST00000495434 EIF4A1P60842 406 aaKnown RBP18.45■□□□□ 0.54
MRPL55-232ENST00000495434 THUMPD2Q9BTF0 503 aaKnown RBP18.45■□□□□ 0.54
MRPL55-232ENST00000495434 NRXN2Q9P2S2 1712 aa18.45■□□□□ 0.54
MRPL55-232ENST00000495434 N4BP2Q86UW6 1770 aaPredicted RBP18.45■□□□□ 0.54
MRPL55-232ENST00000495434 SCN7AQ01118 1682 aa18.44■□□□□ 0.54
MRPL55-232ENST00000495434 A0A0G2JLW4 131 aa18.44■□□□□ 0.54
MRPL55-232ENST00000495434 GIGYF1O75420 1035 aaPredicted RBP18.44■□□□□ 0.54
MRPL55-232ENST00000495434 AFDNP55196 1824 aaKnown RBP18.44■□□□□ 0.54
MRPL55-232ENST00000495434 LAMB4A4D0S4 1761 aa18.43■□□□□ 0.54
MRPL55-232ENST00000495434 RGL2O15211 777 aa18.43■□□□□ 0.54
MRPL55-232ENST00000495434 CAMTA2O94983 1202 aa18.43■□□□□ 0.54
MRPL55-232ENST00000495434 CCDC146Q8IYE0 955 aa18.43■□□□□ 0.54
MRPL55-232ENST00000495434 TBC1D2BQ9UPU7 963 aa18.43■□□□□ 0.54
MRPL55-232ENST00000495434 ZNF330Q9Y3S2 320 aaPredicted RBP18.43■□□□□ 0.54
MRPL55-232ENST00000495434 BRCA1P38398 1863 aaKnown RBP18.43■□□□□ 0.54
MRPL55-232ENST00000495434 SERPINB2P05120 415 aa18.42■□□□□ 0.54
MRPL55-232ENST00000495434 DPEP1P16444 411 aa18.42■□□□□ 0.54
MRPL55-232ENST00000495434 KCNA3P22001 575 aa18.42■□□□□ 0.54
MRPL55-232ENST00000495434 CLEC4GQ6UXB4 293 aa18.42■□□□□ 0.54
MRPL55-232ENST00000495434 DZIP3Q86Y13 1208 aaKnown RBP18.42■□□□□ 0.54
MRPL55-232ENST00000495434 BCORQ6W2J9 1755 aa18.41■□□□□ 0.54
MRPL55-232ENST00000495434 NBPF26B4DH59 902 aa18.41■□□□□ 0.54
MRPL55-232ENST00000495434 NBPF10Q6P3W6 841 aaKnown RBP18.41■□□□□ 0.54
MRPL55-232ENST00000495434 NBPF15Q8N660 670 aa18.41■□□□□ 0.54
MRPL55-232ENST00000495434 TSPYL4Q9UJ04 414 aa18.41■□□□□ 0.54
MRPL55-232ENST00000495434 TBC1D9BQ66K14 1250 aa18.4■□□□□ 0.54
MRPL55-232ENST00000495434 ZNF784Q8NCA9 323 aaPredicted RBP18.4■□□□□ 0.54
MRPL55-232ENST00000495434 PIM2Q9P1W9 311 aa18.4■□□□□ 0.54
MRPL55-232ENST00000495434 TRIM35Q9UPQ4 493 aa18.4■□□□□ 0.54
MRPL55-232ENST00000495434 NEUROD2Q15784 382 aa18.39■□□□□ 0.53
MRPL55-232ENST00000495434 RRP7AQ9Y3A4 280 aaKnown RBP18.39■□□□□ 0.53
MRPL55-232ENST00000495434 CARMIL3Q8ND23 1372 aa18.39■□□□□ 0.53
MRPL55-232ENST00000495434 PIP4K2AP48426 406 aaPredicted RBP18.38■□□□□ 0.53
MRPL55-232ENST00000495434 BICDL1Q6ZP65 573 aa18.38■□□□□ 0.53
MRPL55-232ENST00000495434 SETDB2Q96T68 719 aa18.38■□□□□ 0.53
MRPL55-232ENST00000495434 BCS1LQ9Y276 419 aa18.38■□□□□ 0.53
MRPL55-232ENST00000495434 ZNF652Q9Y2D9 606 aa18.38■□□□□ 0.53
MRPL55-232ENST00000495434 ARFGEF1Q9Y6D6 1849 aa18.37■□□□□ 0.53
MRPL55-232ENST00000495434 CHL1O00533 1208 aa18.37■□□□□ 0.53
MRPL55-232ENST00000495434 WWC3Q9ULE0 1092 aa18.37■□□□□ 0.53
MRPL55-232ENST00000495434 PDZRN3Q9UPQ7 1066 aa18.37■□□□□ 0.53
MRPL55-232ENST00000495434 ERBB4Q15303 1308 aa18.37■□□□□ 0.53
MRPL55-232ENST00000495434 ANP32CO43423 234 aa18.35■□□□□ 0.53
MRPL55-232ENST00000495434 DALRD3Q5D0E6 543 aaKnown RBP18.35■□□□□ 0.53
MRPL55-232ENST00000495434 ERVV-1B6SEH8 477 aa18.34■□□□□ 0.53
MRPL55-232ENST00000495434 CHRNA5P30532 468 aa18.34■□□□□ 0.53
MRPL55-232ENST00000495434 BRIP1Q9BX63 1249 aa18.34■□□□□ 0.53
MRPL55-232ENST00000495434 DLEC1Q9Y238 1755 aa18.34■□□□□ 0.53
MRPL55-232ENST00000495434 PDE6BP35913 854 aa18.33■□□□□ 0.52
MRPL55-232ENST00000495434 PRR5LQ6MZQ0 368 aa18.33■□□□□ 0.52
MRPL55-232ENST00000495434 CFAP44Q96MT7 982 aa18.33■□□□□ 0.52
MRPL55-232ENST00000495434 H0YIN7 160 aa18.32■□□□□ 0.52
MRPL55-232ENST00000495434 APAF1O14727 1248 aa18.32■□□□□ 0.52
MRPL55-232ENST00000495434 CNBD1Q8NA66 436 aa18.32■□□□□ 0.52
MRPL55-232ENST00000495434 ADCY9O60503 1353 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms