RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 ATG3Q9NT62 314 aa12.93□□□□□ -0.34
GARNL3-219ENST00000495172 DLEC1Q9Y238 1755 aa12.93□□□□□ -0.34
GARNL3-219ENST00000495172 EVC2Q86UK5 1308 aa12.92□□□□□ -0.34
GARNL3-219ENST00000495172 ADAMTSL1Q8N6G6 1762 aa12.92□□□□□ -0.34
GARNL3-219ENST00000495172 TATP17735 454 aaPredicted RBP12.92□□□□□ -0.34
GARNL3-219ENST00000495172 COL5A3P25940 1745 aaPredicted RBP12.92□□□□□ -0.34
GARNL3-219ENST00000495172 CNTROBQ8N137 903 aa12.92□□□□□ -0.34
GARNL3-219ENST00000495172 AMPHP49418 695 aa12.91□□□□□ -0.34
GARNL3-219ENST00000495172 TTLL6Q8N841 843 aa12.91□□□□□ -0.34
GARNL3-219ENST00000495172 CARMIL3Q8ND23 1372 aa12.91□□□□□ -0.34
GARNL3-219ENST00000495172 FER1L6Q2WGJ9 1857 aa12.91□□□□□ -0.34
GARNL3-219ENST00000495172 C21orf2O43822 256 aa12.9□□□□□ -0.34
GARNL3-219ENST00000495172 HMGB2P26583 209 aaKnown RBP12.9□□□□□ -0.34
GARNL3-219ENST00000495172 RBM42Q9BTD8 480 aaKnown RBP12.9□□□□□ -0.34
GARNL3-219ENST00000495172 KDRP35968 1356 aa12.9□□□□□ -0.34
GARNL3-219ENST00000495172 RPS6KA4O75676 772 aa12.89□□□□□ -0.35
GARNL3-219ENST00000495172 FXR1P51114 621 aaKnown RBP eCLIP12.89□□□□□ -0.35
GARNL3-219ENST00000495172 TMOD3Q9NYL9 352 aa12.89□□□□□ -0.35
GARNL3-219ENST00000495172 SCN4AP35499 1836 aa12.89□□□□□ -0.35
GARNL3-219ENST00000495172 TRAF5O00463 557 aa12.88□□□□□ -0.35
GARNL3-219ENST00000495172 RRS1Q15050 365 aaKnown RBP12.88□□□□□ -0.35
GARNL3-219ENST00000495172 C2CD5Q86YS7 1000 aa12.88□□□□□ -0.35
GARNL3-219ENST00000495172 ZIC5Q96T25 663 aa12.88□□□□□ -0.35
GARNL3-219ENST00000495172 COL6A3P12111 3177 aa12.88□□□□□ -0.35
GARNL3-219ENST00000495172 ZNF541Q9H0D2 1346 aa12.88□□□□□ -0.35
GARNL3-219ENST00000495172 CACNA1SQ13698 1873 aa12.87□□□□□ -0.35
GARNL3-219ENST00000495172 TM4SF1P30408 202 aa12.87□□□□□ -0.35
GARNL3-219ENST00000495172 DDX21Q9NR30 783 aaKnown RBP eCLIP12.87□□□□□ -0.35
GARNL3-219ENST00000495172 USP42Q9H9J4 1324 aaKnown RBP12.87□□□□□ -0.35
GARNL3-219ENST00000495172 CST9Q5W186 159 aa12.86□□□□□ -0.35
GARNL3-219ENST00000495172 CCDC24Q8N4L8 307 aa12.86□□□□□ -0.35
GARNL3-219ENST00000495172 CGNL1Q0VF96 1302 aa12.86□□□□□ -0.35
GARNL3-219ENST00000495172 RNF123Q5XPI4 1314 aa12.86□□□□□ -0.35
GARNL3-219ENST00000495172 IQCA1LA6NCM1 817 aa12.85□□□□□ -0.35
GARNL3-219ENST00000495172 EPHX2P34913 555 aa12.85□□□□□ -0.35
GARNL3-219ENST00000495172 CIAPIN1Q6FI81 312 aa12.85□□□□□ -0.35
GARNL3-219ENST00000495172 TMC1Q8TDI8 760 aa12.85□□□□□ -0.35
GARNL3-219ENST00000495172 SLC12A5Q9H2X9 1139 aa12.85□□□□□ -0.35
GARNL3-219ENST00000495172 ADAMTS7Q9UKP4 1686 aa12.85□□□□□ -0.35
GARNL3-219ENST00000495172 CNTNAP4Q9C0A0 1308 aa12.85□□□□□ -0.35
GARNL3-219ENST00000495172 COL11A2P13942 1736 aaPredicted RBP12.85□□□□□ -0.35
GARNL3-219ENST00000495172 ECE1P42892 770 aa12.84□□□□□ -0.35
GARNL3-219ENST00000495172 RC3H1Q5TC82 1133 aaKnown RBP12.84□□□□□ -0.35
GARNL3-219ENST00000495172 USPL1Q5W0Q7 1092 aa12.84□□□□□ -0.35
GARNL3-219ENST00000495172 ZNF622Q969S3 477 aaKnown RBP eCLIP12.84□□□□□ -0.35
GARNL3-219ENST00000495172 L3MBTL3Q96JM7 780 aaPredicted RBP12.84□□□□□ -0.35
GARNL3-219ENST00000495172 ANKRD31Q8N7Z5 1873 aa12.83□□□□□ -0.36
GARNL3-219ENST00000495172 HACL1Q9UJ83 578 aa12.83□□□□□ -0.36
GARNL3-219ENST00000495172 NRXN2Q9P2S2 1712 aa12.82□□□□□ -0.36
GARNL3-219ENST00000495172 CRKLP46109 303 aaKnown RBP12.82□□□□□ -0.36
GARNL3-219ENST00000495172 NFIXQ14938 502 aa12.82□□□□□ -0.36
GARNL3-219ENST00000495172 NKX1-1Q15270 411 aaPredicted RBP12.82□□□□□ -0.36
GARNL3-219ENST00000495172 HSP90AB2PQ58FF8 381 aa12.82□□□□□ -0.36
GARNL3-219ENST00000495172 GCC1Q96CN9 775 aa12.82□□□□□ -0.36
GARNL3-219ENST00000495172 STAC3Q96MF2 364 aa12.82□□□□□ -0.36
GARNL3-219ENST00000495172 TAOK3Q9H2K8 898 aa12.82□□□□□ -0.36
GARNL3-219ENST00000495172 SLX4Q8IY92 1834 aa12.82□□□□□ -0.36
GARNL3-219ENST00000495172 TRPM7Q96QT4 1865 aa12.82□□□□□ -0.36
GARNL3-219ENST00000495172 TLL2Q9Y6L7 1015 aa12.81□□□□□ -0.36
GARNL3-219ENST00000495172 A0A1W2PP64 1363 aa12.81□□□□□ -0.36
GARNL3-219ENST00000495172 EDC4Q6P2E9 1401 aaKnown RBP12.8□□□□□ -0.36
GARNL3-219ENST00000495172 H0YIN7 160 aa12.8□□□□□ -0.36
GARNL3-219ENST00000495172 SERPINB2P05120 415 aa12.8□□□□□ -0.36
GARNL3-219ENST00000495172 MAP2K2P36507 400 aa12.8□□□□□ -0.36
GARNL3-219ENST00000495172 NBPF15Q8N660 670 aa12.8□□□□□ -0.36
GARNL3-219ENST00000495172 TRIOBPQ9H2D6 2365 aa12.79□□□□□ -0.36
GARNL3-219ENST00000495172 PTCD1O75127 700 aaKnown RBP12.79□□□□□ -0.36
GARNL3-219ENST00000495172 SLC17A8Q8NDX2 589 aa12.79□□□□□ -0.36
GARNL3-219ENST00000495172 SCN11AQ9UI33 1791 aa12.79□□□□□ -0.36
GARNL3-219ENST00000495172 OLFM4Q6UX06 510 aa12.78□□□□□ -0.36
GARNL3-219ENST00000495172 TJP1Q07157 1748 aa12.78□□□□□ -0.36
GARNL3-219ENST00000495172 ZNF831Q5JPB2 1677 aa12.77□□□□□ -0.36
GARNL3-219ENST00000495172 BRCA2P51587 3418 aa12.77□□□□□ -0.36
GARNL3-219ENST00000495172 CA12O43570 354 aa12.77□□□□□ -0.37
GARNL3-219ENST00000495172 BRPF1P55201 1214 aaPredicted RBP12.77□□□□□ -0.37
GARNL3-219ENST00000495172 BICDL1Q6ZP65 573 aa12.77□□□□□ -0.37
GARNL3-219ENST00000495172 HDGFL2Q7Z4V5 671 aaPredicted RBP12.77□□□□□ -0.37
GARNL3-219ENST00000495172 COG3Q96JB2 828 aa12.77□□□□□ -0.37
GARNL3-219ENST00000495172 ZNF277Q9NRM2 450 aaPredicted RBP12.77□□□□□ -0.37
GARNL3-219ENST00000495172 HPS5Q9UPZ3 1129 aa12.77□□□□□ -0.37
GARNL3-219ENST00000495172 PHKG2P15735 406 aa12.76□□□□□ -0.37
GARNL3-219ENST00000495172 INTS5Q6P9B9 1019 aaKnown RBP12.76□□□□□ -0.37
GARNL3-219ENST00000495172 BCL2L12Q9HB09 334 aa12.76□□□□□ -0.37
GARNL3-219ENST00000495172 LTBP3Q9NS15 1303 aa12.76□□□□□ -0.37
GARNL3-219ENST00000495172 SMG6Q86US8 1419 aaKnown RBP12.76□□□□□ -0.37
GARNL3-219ENST00000495172 CENPFP49454 3210 aa12.76□□□□□ -0.37
GARNL3-219ENST00000495172 SAPCD2Q86UD0 394 aa12.75□□□□□ -0.37
GARNL3-219ENST00000495172 RTL1A6NKG5 1358 aa12.74□□□□□ -0.37
GARNL3-219ENST00000495172 ZPR1O75312 459 aa12.74□□□□□ -0.37
GARNL3-219ENST00000495172 PNMA8AQ86V59 439 aaPredicted RBP12.74□□□□□ -0.37
GARNL3-219ENST00000495172 RANBP2P49792 3224 aaKnown RBP12.74□□□□□ -0.37
GARNL3-219ENST00000495172 CELF2O95319 508 aaKnown RBP12.73□□□□□ -0.37
GARNL3-219ENST00000495172 EPS15P42566 896 aa12.73□□□□□ -0.37
GARNL3-219ENST00000495172 DLK2Q6UY11 383 aa12.73□□□□□ -0.37
GARNL3-219ENST00000495172 SYNE4Q8N205 404 aa12.73□□□□□ -0.37
GARNL3-219ENST00000495172 ZNF408Q9H9D4 720 aa12.73□□□□□ -0.37
GARNL3-219ENST00000495172 SPG7Q9UQ90 795 aa12.73□□□□□ -0.37
GARNL3-219ENST00000495172 CEP290O15078 2479 aa12.73□□□□□ -0.37
GARNL3-219ENST00000495172 HTTP42858 3142 aa12.73□□□□□ -0.37
GARNL3-219ENST00000495172 RAB3GAP2Q9H2M9 1393 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms