RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 KIF13BQ9NQT8 1826 aa14.16□□□□□ -0.14
NELFE-213ENST00000494956 CANXP27824 592 aaKnown RBP14.16□□□□□ -0.14
NELFE-213ENST00000494956 USPL1Q5W0Q7 1092 aa14.16□□□□□ -0.14
NELFE-213ENST00000494956 HEG1Q9ULI3 1381 aa14.15□□□□□ -0.14
NELFE-213ENST00000494956 PRAMEF22A3QJZ6 481 aa14.15□□□□□ -0.14
NELFE-213ENST00000494956 DDR1Q08345 913 aa14.15□□□□□ -0.14
NELFE-213ENST00000494956 NLGN1Q8N2Q7 840 aa14.15□□□□□ -0.14
NELFE-213ENST00000494956 COL15A1P39059 1388 aa14.14□□□□□ -0.15
NELFE-213ENST00000494956 BTBD11A6QL63 1104 aa14.14□□□□□ -0.15
NELFE-213ENST00000494956 PIP4K2AP48426 406 aaPredicted RBP14.14□□□□□ -0.15
NELFE-213ENST00000494956 PLEKHF1Q96S99 279 aa14.14□□□□□ -0.15
NELFE-213ENST00000494956 MIS18AQ9NYP9 233 aa14.14□□□□□ -0.15
NELFE-213ENST00000494956 PXDNLA1KZ92 1463 aa14.13□□□□□ -0.15
NELFE-213ENST00000494956 A0A0G2JLW4 131 aa14.13□□□□□ -0.15
NELFE-213ENST00000494956 VSIG10Q8N0Z9 540 aa14.13□□□□□ -0.15
NELFE-213ENST00000494956 ZNF784Q8NCA9 323 aaPredicted RBP14.13□□□□□ -0.15
NELFE-213ENST00000494956 THUMPD2Q9BTF0 503 aaKnown RBP14.13□□□□□ -0.15
NELFE-213ENST00000494956 PARP3Q9Y6F1 533 aa14.13□□□□□ -0.15
NELFE-213ENST00000494956 C10orf71Q711Q0 1435 aa14.13□□□□□ -0.15
NELFE-213ENST00000494956 AFDNP55196 1824 aaKnown RBP14.13□□□□□ -0.15
NELFE-213ENST00000494956 A1BGP04217 495 aa14.12□□□□□ -0.15
NELFE-213ENST00000494956 RTF1Q92541 710 aaKnown RBP14.12□□□□□ -0.15
NELFE-213ENST00000494956 BCL2L12Q9HB09 334 aa14.12□□□□□ -0.15
NELFE-213ENST00000494956 ZNF330Q9Y3S2 320 aaPredicted RBP14.12□□□□□ -0.15
NELFE-213ENST00000494956 USP16Q9Y5T5 823 aa14.12□□□□□ -0.15
NELFE-213ENST00000494956 ZPR1O75312 459 aa14.11□□□□□ -0.15
NELFE-213ENST00000494956 RALBP1Q15311 655 aa14.11□□□□□ -0.15
NELFE-213ENST00000494956 FMNL2Q96PY5 1086 aa14.11□□□□□ -0.15
NELFE-213ENST00000494956 BRCA1P38398 1863 aaKnown RBP14.1□□□□□ -0.15
NELFE-213ENST00000494956 POLRMTO00411 1230 aaKnown RBP14.1□□□□□ -0.15
NELFE-213ENST00000494956 DPEP1P16444 411 aa14.1□□□□□ -0.15
NELFE-213ENST00000494956 TM4SF1P30408 202 aa14.1□□□□□ -0.15
NELFE-213ENST00000494956 NARFQ9UHQ1 456 aa14.1□□□□□ -0.15
NELFE-213ENST00000494956 TBC1D2BQ9UPU7 963 aa14.1□□□□□ -0.15
NELFE-213ENST00000494956 GRIN3BO60391 1043 aa14.09□□□□□ -0.15
NELFE-213ENST00000494956 STARD3NLO95772 234 aa14.09□□□□□ -0.15
NELFE-213ENST00000494956 EIF5P55010 431 aaKnown RBP14.09□□□□□ -0.15
NELFE-213ENST00000494956 NFIXQ14938 502 aa14.09□□□□□ -0.15
NELFE-213ENST00000494956 BICDL1Q6ZP65 573 aa14.09□□□□□ -0.15
NELFE-213ENST00000494956 UTRNP46939 3433 aa14.09□□□□□ -0.15
NELFE-213ENST00000494956 KCNA3P22001 575 aa14.08□□□□□ -0.16
NELFE-213ENST00000494956 CHRNA5P30532 468 aa14.08□□□□□ -0.16
NELFE-213ENST00000494956 NFE2L2Q16236 605 aa14.08□□□□□ -0.16
NELFE-213ENST00000494956 CCDC146Q8IYE0 955 aa14.08□□□□□ -0.16
NELFE-213ENST00000494956 KDM3BQ7LBC6 1761 aa14.08□□□□□ -0.16
NELFE-213ENST00000494956 MYBBP1AQ9BQG0 1328 aaKnown RBP14.08□□□□□ -0.16
NELFE-213ENST00000494956 GOLGB1Q14789 3259 aaKnown RBP14.08□□□□□ -0.16
NELFE-213ENST00000494956 SCN7AQ01118 1682 aa14.07□□□□□ -0.16
NELFE-213ENST00000494956 HTATSF1O43719 755 aaKnown RBP14.07□□□□□ -0.16
NELFE-213ENST00000494956 NEFMP07197 916 aa14.07□□□□□ -0.16
NELFE-213ENST00000494956 TGFB2P61812 414 aa14.07□□□□□ -0.16
NELFE-213ENST00000494956 TAF7Q15545 349 aaPredicted RBP14.07□□□□□ -0.16
NELFE-213ENST00000494956 BCS1LQ9Y276 419 aa14.07□□□□□ -0.16
NELFE-213ENST00000494956 NRXN2Q9P2S2 1712 aa14.07□□□□□ -0.16
NELFE-213ENST00000494956 TBC1D9BQ66K14 1250 aa14.06□□□□□ -0.16
NELFE-213ENST00000494956 CCDC24Q8N4L8 307 aa14.06□□□□□ -0.16
NELFE-213ENST00000494956 TEX13AQ9BXU3 409 aaPredicted RBP14.06□□□□□ -0.16
NELFE-213ENST00000494956 RRP7AQ9Y3A4 280 aaKnown RBP14.06□□□□□ -0.16
NELFE-213ENST00000494956 MAPK8IP3Q9UPT6 1336 aa14.06□□□□□ -0.16
NELFE-213ENST00000494956 CARMIL3Q8ND23 1372 aa14.06□□□□□ -0.16
NELFE-213ENST00000494956 BCORQ6W2J9 1755 aa14.05□□□□□ -0.16
NELFE-213ENST00000494956 NBPF26B4DH59 902 aa14.05□□□□□ -0.16
NELFE-213ENST00000494956 SERPINB2P05120 415 aa14.05□□□□□ -0.16
NELFE-213ENST00000494956 NBPF10Q6P3W6 841 aaKnown RBP14.05□□□□□ -0.16
NELFE-213ENST00000494956 NBPF15Q8N660 670 aa14.05□□□□□ -0.16
NELFE-213ENST00000494956 LAMB4A4D0S4 1761 aa14.04□□□□□ -0.16
NELFE-213ENST00000494956 SNRPA1P09661 255 aaKnown RBP14.04□□□□□ -0.16
NELFE-213ENST00000494956 IL6STP40189 918 aaPredicted RBP14.04□□□□□ -0.16
NELFE-213ENST00000494956 RIPK4P57078 832 aa14.04□□□□□ -0.16
NELFE-213ENST00000494956 NEUROD2Q15784 382 aa14.04□□□□□ -0.16
NELFE-213ENST00000494956 PRKRIP1Q9H875 184 aaPredicted RBP14.04□□□□□ -0.16
NELFE-213ENST00000494956 ANKRD31Q8N7Z5 1873 aa14.04□□□□□ -0.16
NELFE-213ENST00000494956 A0A087WZG4 1122 aa14.03□□□□□ -0.16
NELFE-213ENST00000494956 CAMTA2O94983 1202 aa14.03□□□□□ -0.16
NELFE-213ENST00000494956 DZIP3Q86Y13 1208 aaKnown RBP14.03□□□□□ -0.16
NELFE-213ENST00000494956 ARFGEF1Q9Y6D6 1849 aa14.03□□□□□ -0.16
NELFE-213ENST00000494956 ATP10DQ9P241 1426 aa14.02□□□□□ -0.16
NELFE-213ENST00000494956 TMPOP42166 694 aaKnown RBP14.02□□□□□ -0.17
NELFE-213ENST00000494956 EIF4A1P60842 406 aaKnown RBP14.02□□□□□ -0.17
NELFE-213ENST00000494956 ZNF526Q8TF50 670 aaPredicted RBP14.02□□□□□ -0.17
NELFE-213ENST00000494956 ADAMTS8Q9UP79 889 aa14.02□□□□□ -0.17
NELFE-213ENST00000494956 ARHGAP27Q6ZUM4 889 aa14.01□□□□□ -0.17
NELFE-213ENST00000494956 NGEFQ8N5V2 710 aa14.01□□□□□ -0.17
NELFE-213ENST00000494956 PNNQ9H307 717 aaKnown RBP14.01□□□□□ -0.17
NELFE-213ENST00000494956 GIGYF1O75420 1035 aaPredicted RBP14□□□□□ -0.17
NELFE-213ENST00000494956 CCDC184Q52MB2 194 aa14□□□□□ -0.17
NELFE-213ENST00000494956 PIM2Q9P1W9 311 aa14□□□□□ -0.17
NELFE-213ENST00000494956 DLEC1Q9Y238 1755 aa14□□□□□ -0.17
NELFE-213ENST00000494956 ADCY9O60503 1353 aa13.99□□□□□ -0.17
NELFE-213ENST00000494956 COL11A2P13942 1736 aaPredicted RBP13.99□□□□□ -0.17
NELFE-213ENST00000494956 WDR43Q15061 677 aaKnown RBP eCLIP13.99□□□□□ -0.17
NELFE-213ENST00000494956 PRR5LQ6MZQ0 368 aa13.99□□□□□ -0.17
NELFE-213ENST00000494956 NPM2Q86SE8 214 aaKnown RBP13.99□□□□□ -0.17
NELFE-213ENST00000494956 PNISRQ8TF01 805 aaKnown RBP13.99□□□□□ -0.17
NELFE-213ENST00000494956 CACNA1SQ13698 1873 aa13.99□□□□□ -0.17
NELFE-213ENST00000494956 SENP3-EIF4A1A0A087X0R7 540 aa13.98□□□□□ -0.17
NELFE-213ENST00000494956 HLFQ16534 295 aa13.98□□□□□ -0.17
NELFE-213ENST00000494956 DALRD3Q5D0E6 543 aaKnown RBP13.98□□□□□ -0.17
NELFE-213ENST00000494956 RUNDC1Q96C34 613 aa13.98□□□□□ -0.17
NELFE-213ENST00000494956 TSPYL4Q9UJ04 414 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms