RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 ZNF496Q96IT1 587 aaPredicted RBP14.45□□□□□ -0.1
HDLBP-245ENST00000494862 CDCA7Q9BWT1 371 aaPredicted RBP14.45□□□□□ -0.1
HDLBP-245ENST00000494862 C1orf115Q9H7X2 142 aa14.45□□□□□ -0.1
HDLBP-245ENST00000494862 PHAXQ9H814 394 aaKnown RBP14.45□□□□□ -0.1
HDLBP-245ENST00000494862 HYPKQ9NX55 129 aa14.45□□□□□ -0.1
HDLBP-245ENST00000494862 THRAP3Q9Y2W1 955 aaKnown RBP14.45□□□□□ -0.1
HDLBP-245ENST00000494862 SNRPA1P09661 255 aaKnown RBP14.44□□□□□ -0.1
HDLBP-245ENST00000494862 DDX21Q9NR30 783 aaKnown RBP eCLIP14.44□□□□□ -0.1
HDLBP-245ENST00000494862 SHANK3Q9BYB0 1731 aa14.44□□□□□ -0.1
HDLBP-245ENST00000494862 PRAMEF22A3QJZ6 481 aa14.43□□□□□ -0.1
HDLBP-245ENST00000494862 RGS3P49796 1198 aa14.43□□□□□ -0.1
HDLBP-245ENST00000494862 RPAP2Q8IXW5 612 aaPredicted RBP14.43□□□□□ -0.1
HDLBP-245ENST00000494862 ANKRD44Q8N8A2 993 aa14.43□□□□□ -0.1
HDLBP-245ENST00000494862 GCC1Q96CN9 775 aa14.43□□□□□ -0.1
HDLBP-245ENST00000494862 MEIS3Q99687 375 aa14.43□□□□□ -0.1
HDLBP-245ENST00000494862 PLCH1Q4KWH8 1693 aa14.42□□□□□ -0.1
HDLBP-245ENST00000494862 SPATA31A1Q5TZJ5 1347 aa14.42□□□□□ -0.1
HDLBP-245ENST00000494862 SLIT2O94813 1529 aa14.42□□□□□ -0.1
HDLBP-245ENST00000494862 NRAPQ86VF7 1730 aa14.42□□□□□ -0.1
HDLBP-245ENST00000494862 EXOC5O00471 708 aa14.42□□□□□ -0.1
HDLBP-245ENST00000494862 GNAI3P08754 354 aa14.42□□□□□ -0.1
HDLBP-245ENST00000494862 PDE4AP27815 886 aa14.42□□□□□ -0.1
HDLBP-245ENST00000494862 SIRT2Q8IXJ6 389 aa14.42□□□□□ -0.1
HDLBP-245ENST00000494862 ANXA1P04083 346 aa14.41□□□□□ -0.1
HDLBP-245ENST00000494862 PDIA6Q15084 440 aa14.41□□□□□ -0.1
HDLBP-245ENST00000494862 PROSER3Q2NL68 480 aa14.41□□□□□ -0.1
HDLBP-245ENST00000494862 DNAAF4Q8WXU2 420 aa14.41□□□□□ -0.1
HDLBP-245ENST00000494862 ATP10DQ9P241 1426 aa14.41□□□□□ -0.1
HDLBP-245ENST00000494862 SPATA31A5Q5VU36 1347 aa14.41□□□□□ -0.1
HDLBP-245ENST00000494862 SPATA31A7Q8IWB4 1347 aa14.41□□□□□ -0.1
HDLBP-245ENST00000494862 GNAI2P04899 355 aa14.4□□□□□ -0.1
HDLBP-245ENST00000494862 CEP85Q6P2H3 762 aa14.4□□□□□ -0.1
HDLBP-245ENST00000494862 KSR2Q6VAB6 950 aa14.4□□□□□ -0.1
HDLBP-245ENST00000494862 BACH2Q9BYV9 841 aa14.4□□□□□ -0.1
HDLBP-245ENST00000494862 SRCIN1Q9C0H9 1055 aa14.4□□□□□ -0.1
HDLBP-245ENST00000494862 TMOD3Q9NYL9 352 aa14.4□□□□□ -0.1
HDLBP-245ENST00000494862 ZBTB12Q9Y330 459 aaPredicted RBP14.4□□□□□ -0.1
HDLBP-245ENST00000494862 TNS2Q63HR2 1409 aa14.4□□□□□ -0.1
HDLBP-245ENST00000494862 ERBB4Q15303 1308 aa14.4□□□□□ -0.1
HDLBP-245ENST00000494862 ADCY9O60503 1353 aa14.39□□□□□ -0.11
HDLBP-245ENST00000494862 NWD2Q9ULI1 1742 aa14.39□□□□□ -0.11
HDLBP-245ENST00000494862 PI4KAP2A4QPH2 592 aa14.39□□□□□ -0.11
HDLBP-245ENST00000494862 DDX58O95786 925 aaKnown RBP14.39□□□□□ -0.11
HDLBP-245ENST00000494862 NUCB1Q02818 461 aa14.39□□□□□ -0.11
HDLBP-245ENST00000494862 BEND3Q5T5X7 828 aa14.39□□□□□ -0.11
HDLBP-245ENST00000494862 PI4KAP1Q8N8J0 262 aa14.39□□□□□ -0.11
HDLBP-245ENST00000494862 USP16Q9Y5T5 823 aa14.39□□□□□ -0.11
HDLBP-245ENST00000494862 SPATA31A6Q5VVP1 1343 aa14.39□□□□□ -0.11
HDLBP-245ENST00000494862 N4BP2Q86UW6 1770 aaPredicted RBP14.38□□□□□ -0.11
HDLBP-245ENST00000494862 FAM161AQ3B820 660 aa14.38□□□□□ -0.11
HDLBP-245ENST00000494862 BARGINQ6ZT62 677 aa14.38□□□□□ -0.11
HDLBP-245ENST00000494862 UNC5CLQ8IV45 518 aa14.38□□□□□ -0.11
HDLBP-245ENST00000494862 DCTPP1Q9H773 170 aa14.38□□□□□ -0.11
HDLBP-245ENST00000494862 RGS17Q9UGC6 210 aaPredicted RBP14.38□□□□□ -0.11
HDLBP-245ENST00000494862 LRP6O75581 1613 aa14.37□□□□□ -0.11
HDLBP-245ENST00000494862 PAPPAQ13219 1627 aa14.37□□□□□ -0.11
HDLBP-245ENST00000494862 KCPQ6ZWJ8 1503 aa14.37□□□□□ -0.11
HDLBP-245ENST00000494862 C5P01031 1676 aa14.37□□□□□ -0.11
HDLBP-245ENST00000494862 HMMRO75330 724 aa14.37□□□□□ -0.11
HDLBP-245ENST00000494862 ALDH1L1O75891 902 aa14.37□□□□□ -0.11
HDLBP-245ENST00000494862 USP44Q9H0E7 712 aa14.37□□□□□ -0.11
HDLBP-245ENST00000494862 MAP3K2Q9Y2U5 619 aa14.37□□□□□ -0.11
HDLBP-245ENST00000494862 GLI3P10071 1580 aa14.37□□□□□ -0.11
HDLBP-245ENST00000494862 WNK3Q9BYP7 1800 aa14.36□□□□□ -0.11
HDLBP-245ENST00000494862 TOGARAM1Q9Y4F4 1720 aa14.36□□□□□ -0.11
HDLBP-245ENST00000494862 DDB1Q16531 1140 aa14.36□□□□□ -0.11
HDLBP-245ENST00000494862 LRP10Q7Z4F1 713 aa14.36□□□□□ -0.11
HDLBP-245ENST00000494862 CHD1LQ86WJ1 897 aa14.36□□□□□ -0.11
HDLBP-245ENST00000494862 PIGBQ92521 554 aa14.36□□□□□ -0.11
HDLBP-245ENST00000494862 IBTKQ9P2D0 1353 aaPredicted RBP14.35□□□□□ -0.11
HDLBP-245ENST00000494862 UBTFL1P0CB47 393 aaPredicted RBP14.35□□□□□ -0.11
HDLBP-245ENST00000494862 VPS72Q15906 364 aa14.35□□□□□ -0.11
HDLBP-245ENST00000494862 ANKRD45Q5TZF3 282 aa14.35□□□□□ -0.11
HDLBP-245ENST00000494862 FNBP4Q8N3X1 1017 aaPredicted RBP14.35□□□□□ -0.11
HDLBP-245ENST00000494862 XAGE3Q8WTP9 111 aa14.35□□□□□ -0.11
HDLBP-245ENST00000494862 NGLY1Q96IV0 654 aa14.35□□□□□ -0.11
HDLBP-245ENST00000494862 CCDC9Q9Y3X0 531 aaKnown RBP14.35□□□□□ -0.11
HDLBP-245ENST00000494862 UBR2Q8IWV8 1755 aa14.34□□□□□ -0.11
HDLBP-245ENST00000494862 MYL6BP14649 208 aa14.34□□□□□ -0.11
HDLBP-245ENST00000494862 ATP8B2P98198 1209 aa14.34□□□□□ -0.11
HDLBP-245ENST00000494862 AIMP1Q12904 312 aaKnown RBP14.34□□□□□ -0.11
HDLBP-245ENST00000494862 C8orf34Q49A92 452 aa14.34□□□□□ -0.11
HDLBP-245ENST00000494862 COPS6Q7L5N1 327 aa14.34□□□□□ -0.11
HDLBP-245ENST00000494862 VSIG10Q8N0Z9 540 aa14.34□□□□□ -0.11
HDLBP-245ENST00000494862 LINS1Q8NG48 757 aa14.34□□□□□ -0.11
HDLBP-245ENST00000494862 C8orf37Q96NL8 207 aa14.34□□□□□ -0.11
HDLBP-245ENST00000494862 TEX13AQ9BXU3 409 aaPredicted RBP14.34□□□□□ -0.11
HDLBP-245ENST00000494862 ATG3Q9NT62 314 aa14.34□□□□□ -0.11
HDLBP-245ENST00000494862 LAMB4A4D0S4 1761 aa14.33□□□□□ -0.12
HDLBP-245ENST00000494862 PTCD1O75127 700 aaKnown RBP14.33□□□□□ -0.12
HDLBP-245ENST00000494862 RIC3Q7Z5B4 369 aa14.33□□□□□ -0.12
HDLBP-245ENST00000494862 LNPKQ9C0E8 428 aa14.33□□□□□ -0.12
HDLBP-245ENST00000494862 HDAC5Q9UQL6 1122 aa14.33□□□□□ -0.12
HDLBP-245ENST00000494862 LRRFIP2Q9Y608 721 aaKnown RBP14.33□□□□□ -0.12
HDLBP-245ENST00000494862 BCL9O00512 1426 aa14.32□□□□□ -0.12
HDLBP-245ENST00000494862 BCL9LQ86UU0 1499 aa14.32□□□□□ -0.12
HDLBP-245ENST00000494862 METTL22Q9BUU2 404 aaPredicted RBP14.32□□□□□ -0.12
HDLBP-245ENST00000494862 ASAP1Q9ULH1 1129 aa14.32□□□□□ -0.12
HDLBP-245ENST00000494862 NBPF26B4DH59 902 aa14.31□□□□□ -0.12
HDLBP-245ENST00000494862 NEXNQ0ZGT2 675 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms