RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, humanhuman

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-222ENST00000494672 PCDHGC4Q9Y5F7 938 aa9.45□□□□□ -0.9
CCDC66-222ENST00000494672 ZBTB7BO15156 539 aaPredicted RBP9.44□□□□□ -0.9
CCDC66-222ENST00000494672 BNIP3LO60238 219 aa9.44□□□□□ -0.9
CCDC66-222ENST00000494672 GDF11O95390 407 aa9.44□□□□□ -0.9
CCDC66-222ENST00000494672 ATP4AP20648 1035 aa9.44□□□□□ -0.9
CCDC66-222ENST00000494672 CCDC102BQ68D86 513 aa9.44□□□□□ -0.9
CCDC66-222ENST00000494672 ZNF295-AS1Q8N0V1 137 aa9.44□□□□□ -0.9
CCDC66-222ENST00000494672 KLRG1Q96E93 195 aa9.44□□□□□ -0.9
CCDC66-222ENST00000494672 UCN2Q96RP3 112 aa9.44□□□□□ -0.9
CCDC66-222ENST00000494672 ZCCHC2Q9C0B9 1178 aaKnown RBP9.44□□□□□ -0.9
CCDC66-222ENST00000494672 MKRN1Q9UHC7 482 aaKnown RBP9.44□□□□□ -0.9
CCDC66-222ENST00000494672 A0A1W2PNR3 127 aa9.43□□□□□ -0.9
CCDC66-222ENST00000494672 FGFR3P22607 806 aa9.43□□□□□ -0.9
CCDC66-222ENST00000494672 IRS1P35568 1242 aa9.43□□□□□ -0.9
CCDC66-222ENST00000494672 GSK3AP49840 483 aa9.43□□□□□ -0.9
CCDC66-222ENST00000494672 TPCN2Q8NHX9 752 aa9.43□□□□□ -0.9
CCDC66-222ENST00000494672 GLMNQ92990 594 aa9.43□□□□□ -0.9
CCDC66-222ENST00000494672 NDFIP2Q9NV92 336 aa9.43□□□□□ -0.9
CCDC66-222ENST00000494672 DNAAF2Q9NVR5 837 aaKnown RBP9.43□□□□□ -0.9
CCDC66-222ENST00000494672 RBM19Q9Y4C8 960 aaKnown RBP9.43□□□□□ -0.9
CCDC66-222ENST00000494672 GJA3Q9Y6H8 435 aa9.43□□□□□ -0.9
CCDC66-222ENST00000494672 USP3Q9Y6I4 520 aa9.43□□□□□ -0.9
CCDC66-222ENST00000494672 PALM3A6NDB9 673 aaPredicted RBP9.42□□□□□ -0.9
CCDC66-222ENST00000494672 A6NJR5 290 aa9.42□□□□□ -0.9
CCDC66-222ENST00000494672 ATXN7O15265 892 aaPredicted RBP9.42□□□□□ -0.9
CCDC66-222ENST00000494672 OIP5O43482 229 aa9.42□□□□□ -0.9
CCDC66-222ENST00000494672 BMP4P12644 408 aa9.42□□□□□ -0.9
CCDC66-222ENST00000494672 KANK3Q6NY19 840 aa9.42□□□□□ -0.9
CCDC66-222ENST00000494672 TNS4Q8IZW8 715 aa9.42□□□□□ -0.9
CCDC66-222ENST00000494672 LARGE2Q8N3Y3 721 aa9.42□□□□□ -0.9
CCDC66-222ENST00000494672 OGFOD1Q8N543 542 aa9.42□□□□□ -0.9
CCDC66-222ENST00000494672 GDF2Q9UK05 429 aaPredicted RBP9.42□□□□□ -0.9
CCDC66-222ENST00000494672 PARP3Q9Y6F1 533 aa9.42□□□□□ -0.9
CCDC66-222ENST00000494672 TEAD4Q15561 434 aa9.41□□□□□ -0.9
CCDC66-222ENST00000494672 BICDL1Q6ZP65 573 aa9.41□□□□□ -0.9
CCDC66-222ENST00000494672 PODNQ7Z5L7 613 aa9.41□□□□□ -0.9
CCDC66-222ENST00000494672 BEND7Q8N7W2 519 aaPredicted RBP9.41□□□□□ -0.9
CCDC66-222ENST00000494672 L3MBTL2Q969R5 705 aa9.41□□□□□ -0.9
CCDC66-222ENST00000494672 ZIC5Q96T25 663 aa9.41□□□□□ -0.9
CCDC66-222ENST00000494672 TFIP11Q9UBB9 837 aaKnown RBP9.41□□□□□ -0.9
CCDC66-222ENST00000494672 NOS2P35228 1153 aa9.4□□□□□ -0.9
CCDC66-222ENST00000494672 CLDN10P78369 228 aa9.4□□□□□ -0.9
CCDC66-222ENST00000494672 FOXK2Q01167 660 aa9.4□□□□□ -0.9
CCDC66-222ENST00000494672 CTBSQ01459 385 aa9.4□□□□□ -0.9
CCDC66-222ENST00000494672 SLC9A9Q8IVB4 645 aa9.4□□□□□ -0.9
CCDC66-222ENST00000494672 GOLGA6L1Q8N7Z2 621 aa9.4□□□□□ -0.9
CCDC66-222ENST00000494672 GALNT6Q8NCL4 622 aa9.4□□□□□ -0.9
CCDC66-222ENST00000494672 CALR3Q96L12 384 aaKnown RBP9.4□□□□□ -0.9
CCDC66-222ENST00000494672 ZNF232Q9UNY5 417 aa9.4□□□□□ -0.9
CCDC66-222ENST00000494672 PHF20L1A8MW92 1017 aa9.39□□□□□ -0.91
CCDC66-222ENST00000494672 EPHA4P54764 986 aa9.39□□□□□ -0.91
CCDC66-222ENST00000494672 KIAA1024Q9UPX6 916 aa9.39□□□□□ -0.91
CCDC66-222ENST00000494672 M0R2N6 131 aa9.38□□□□□ -0.91
CCDC66-222ENST00000494672 C2CD2LO14523 706 aa9.38□□□□□ -0.91
CCDC66-222ENST00000494672 TNP2Q05952 138 aa9.38□□□□□ -0.91
CCDC66-222ENST00000494672 KCTD17Q8N5Z5 321 aa9.38□□□□□ -0.91
CCDC66-222ENST00000494672 NEUROD4Q9HD90 331 aa9.38□□□□□ -0.91
CCDC66-222ENST00000494672 CHMP3Q9Y3E7 222 aa9.38□□□□□ -0.91
CCDC66-222ENST00000494672 CNTNAP5Q8WYK1 1306 aa9.37□□□□□ -0.91
CCDC66-222ENST00000494672 SERTM1A2A2V5 107 aa9.37□□□□□ -0.91
CCDC66-222ENST00000494672 KHNYNO15037 678 aaKnown RBP9.37□□□□□ -0.91
CCDC66-222ENST00000494672 MAPTP10636 758 aaKnown RBP9.37□□□□□ -0.91
CCDC66-222ENST00000494672 RASA1P20936 1047 aa9.37□□□□□ -0.91
CCDC66-222ENST00000494672 TXLNAP40222 546 aa9.37□□□□□ -0.91
CCDC66-222ENST00000494672 TBCELQ5QJ74 424 aa9.37□□□□□ -0.91
CCDC66-222ENST00000494672 ZDHHC1Q8WTX9 485 aa9.37□□□□□ -0.91
CCDC66-222ENST00000494672 EDARADDQ8WWZ3 215 aa9.37□□□□□ -0.91
CCDC66-222ENST00000494672 ZNF594Q96JF6 807 aaPredicted RBP9.37□□□□□ -0.91
CCDC66-222ENST00000494672 SIX5Q8N196 739 aa9.36□□□□□ -0.91
CCDC66-222ENST00000494672 MAFBQ9Y5Q3 323 aaPredicted RBP9.36□□□□□ -0.91
CCDC66-222ENST00000494672 DNMT3AQ9Y6K1 912 aaPredicted RBP9.36□□□□□ -0.91
CCDC66-222ENST00000494672 DCDC2BA2VCK2 349 aa9.35□□□□□ -0.91
CCDC66-222ENST00000494672 ARAFP10398 606 aa9.35□□□□□ -0.91
CCDC66-222ENST00000494672 FAM182BQ5T319 152 aa9.35□□□□□ -0.91
CCDC66-222ENST00000494672 SAMD5Q5TGI4 173 aa9.35□□□□□ -0.91
CCDC66-222ENST00000494672 GGA1Q9UJY5 639 aa9.35□□□□□ -0.91
CCDC66-222ENST00000494672 GPC6Q9Y625 555 aaPredicted RBP9.35□□□□□ -0.91
CCDC66-222ENST00000494672 EML1O00423 815 aa9.34□□□□□ -0.91
CCDC66-222ENST00000494672 FAM157BP0CG42 384 aa9.34□□□□□ -0.91
CCDC66-222ENST00000494672 PSMA6P60900 246 aaKnown RBP9.34□□□□□ -0.91
CCDC66-222ENST00000494672 LARP1Q6PKG0 1096 aaKnown RBP9.34□□□□□ -0.91
CCDC66-222ENST00000494672 PPP1R12CQ9BZL4 782 aa9.34□□□□□ -0.91
CCDC66-222ENST00000494672 SFI1A8K8P3 1242 aa9.33□□□□□ -0.92
CCDC66-222ENST00000494672 SHISA8B8ZZ34 492 aa9.33□□□□□ -0.92
CCDC66-222ENST00000494672 LAMC2Q13753 1193 aa9.33□□□□□ -0.92
CCDC66-222ENST00000494672 SLCO4C1Q6ZQN7 724 aa9.33□□□□□ -0.92
CCDC66-222ENST00000494672 C1orf229Q6ZS94 237 aaPredicted RBP9.33□□□□□ -0.92
CCDC66-222ENST00000494672 TSPAN10Q9H1Z9 355 aaPredicted RBP9.33□□□□□ -0.92
CCDC66-222ENST00000494672 MARK1Q9P0L2 795 aa9.33□□□□□ -0.92
CCDC66-222ENST00000494672 PRR12Q9ULL5 1215 aa9.33□□□□□ -0.92
CCDC66-222ENST00000494672 CD33P20138 364 aa9.32□□□□□ -0.92
CCDC66-222ENST00000494672 AMPD1P23109 780 aa9.32□□□□□ -0.92
CCDC66-222ENST00000494672 SEC13P55735 322 aa9.32□□□□□ -0.92
CCDC66-222ENST00000494672 C1orf53Q5VUE5 145 aa9.32□□□□□ -0.92
CCDC66-222ENST00000494672 LRRC69Q6ZNQ3 347 aa9.32□□□□□ -0.92
CCDC66-222ENST00000494672 TSEN2Q8NCE0 465 aaKnown RBP9.32□□□□□ -0.92
CCDC66-222ENST00000494672 RRAGCQ9HB90 399 aa9.32□□□□□ -0.92
CCDC66-222ENST00000494672 NEURL1BA8MQ27 555 aa9.31□□□□□ -0.92
CCDC66-222ENST00000494672 RHPN1Q8TCX5 695 aa9.31□□□□□ -0.92
CCDC66-222ENST00000494672 C7orf43Q8WVR3 580 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms