RNA–Protein interactions for RNA: ENST00000494557.1

RAF1-212, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 1 (best)

Gene RAF1, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-212ENST00000494557 BEND3Q5T5X7 828 aa10.56□□□□□ -0.72
RAF1-212ENST00000494557 NBPF6Q5VWK0 638 aa10.56□□□□□ -0.72
RAF1-212ENST00000494557 NBPF4Q96M43 638 aa10.56□□□□□ -0.72
RAF1-212ENST00000494557 LNPKQ9C0E8 428 aa10.56□□□□□ -0.72
RAF1-212ENST00000494557 COL5A2P05997 1499 aaPredicted RBP10.55□□□□□ -0.72
RAF1-212ENST00000494557 DISP2A7MBM2 1401 aa10.55□□□□□ -0.72
RAF1-212ENST00000494557 K7ELQ4 463 aaPredicted RBP10.55□□□□□ -0.72
RAF1-212ENST00000494557 GNAI2P04899 355 aa10.55□□□□□ -0.72
RAF1-212ENST00000494557 PDE1AP54750 535 aa10.55□□□□□ -0.72
RAF1-212ENST00000494557 TSPYL4Q9UJ04 414 aa10.55□□□□□ -0.72
RAF1-212ENST00000494557 AKAP11Q9UKA4 1901 aa10.54□□□□□ -0.72
RAF1-212ENST00000494557 HMMRO75330 724 aa10.54□□□□□ -0.72
RAF1-212ENST00000494557 ALDH1L1O75891 902 aa10.54□□□□□ -0.72
RAF1-212ENST00000494557 CD2BP2O95400 341 aaKnown RBP10.54□□□□□ -0.72
RAF1-212ENST00000494557 SLC4A2P04920 1241 aa10.54□□□□□ -0.72
RAF1-212ENST00000494557 SDSP20132 328 aa10.54□□□□□ -0.72
RAF1-212ENST00000494557 NUP98P52948 1817 aa10.54□□□□□ -0.72
RAF1-212ENST00000494557 PDIA6Q15084 440 aa10.54□□□□□ -0.72
RAF1-212ENST00000494557 PI4K2BQ8TCG2 481 aa10.54□□□□□ -0.72
RAF1-212ENST00000494557 ANKRD45Q5TZF3 282 aa10.54□□□□□ -0.72
RAF1-212ENST00000494557 NGDNQ8NEJ9 315 aaKnown RBP10.54□□□□□ -0.72
RAF1-212ENST00000494557 LAS1LQ9Y4W2 734 aaKnown RBP10.54□□□□□ -0.72
RAF1-212ENST00000494557 DLEC1Q9Y238 1755 aa10.54□□□□□ -0.72
RAF1-212ENST00000494557 C4AP0C0L4 1744 aa10.53□□□□□ -0.72
RAF1-212ENST00000494557 C4BP0C0L5 1744 aa10.53□□□□□ -0.72
RAF1-212ENST00000494557 TIAM2Q8IVF5 1701 aa10.53□□□□□ -0.72
RAF1-212ENST00000494557 DDX11L8A8MPP1 907 aa10.53□□□□□ -0.72
RAF1-212ENST00000494557 NLRP6P59044 892 aa10.53□□□□□ -0.72
RAF1-212ENST00000494557 PKNOX2Q96KN3 472 aa10.53□□□□□ -0.72
RAF1-212ENST00000494557 COL24A1Q17RW2 1714 aa10.53□□□□□ -0.72
RAF1-212ENST00000494557 TTC41PQ6P2S7 1318 aa10.53□□□□□ -0.72
RAF1-212ENST00000494557 RNMTO43148 476 aaKnown RBP10.53□□□□□ -0.72
RAF1-212ENST00000494557 SLC4A3P48751 1232 aa10.53□□□□□ -0.72
RAF1-212ENST00000494557 NBR1Q14596 966 aa10.53□□□□□ -0.72
RAF1-212ENST00000494557 ALDH8A1Q9H2A2 487 aaPredicted RBP10.53□□□□□ -0.72
RAF1-212ENST00000494557 INTS4Q96HW7 963 aaKnown RBP10.52□□□□□ -0.72
RAF1-212ENST00000494557 ERBB4Q15303 1308 aa10.52□□□□□ -0.72
RAF1-212ENST00000494557 CWC22Q9HCG8 908 aaKnown RBP10.52□□□□□ -0.73
RAF1-212ENST00000494557 DOT1LQ8TEK3 1739 aa10.52□□□□□ -0.73
RAF1-212ENST00000494557 AMPHP49418 695 aa10.52□□□□□ -0.73
RAF1-212ENST00000494557 C1orf115Q9H7X2 142 aa10.52□□□□□ -0.73
RAF1-212ENST00000494557 CHD4Q14839 1912 aa10.52□□□□□ -0.73
RAF1-212ENST00000494557 TCHHQ07283 1943 aa10.51□□□□□ -0.73
RAF1-212ENST00000494557 GCP02774 474 aa10.51□□□□□ -0.73
RAF1-212ENST00000494557 NKX1-1Q15270 411 aaPredicted RBP10.51□□□□□ -0.73
RAF1-212ENST00000494557 ABTB2Q8N961 1025 aa10.51□□□□□ -0.73
RAF1-212ENST00000494557 RTF1Q92541 710 aaKnown RBP10.51□□□□□ -0.73
RAF1-212ENST00000494557 GIGYF1O75420 1035 aaPredicted RBP10.51□□□□□ -0.73
RAF1-212ENST00000494557 C19orf44Q9H6X5 657 aa10.51□□□□□ -0.73
RAF1-212ENST00000494557 SCN7AQ01118 1682 aa10.5□□□□□ -0.73
RAF1-212ENST00000494557 PNMA6EA0A0J9YXQ4 647 aa10.5□□□□□ -0.73
RAF1-212ENST00000494557 MCM2P49736 904 aa10.5□□□□□ -0.73
RAF1-212ENST00000494557 HSCBQ8IWL3 235 aa10.5□□□□□ -0.73
RAF1-212ENST00000494557 ESYT1Q9BSJ8 1104 aa10.5□□□□□ -0.73
RAF1-212ENST00000494557 RPAP1Q9BWH6 1393 aaPredicted RBP10.5□□□□□ -0.73
RAF1-212ENST00000494557 MFAP1P55081 439 aaKnown RBP10.49□□□□□ -0.73
RAF1-212ENST00000494557 ERC2O15083 957 aa10.49□□□□□ -0.73
RAF1-212ENST00000494557 SKOR2Q2VWA4 1001 aaPredicted RBP10.49□□□□□ -0.73
RAF1-212ENST00000494557 TMEM87AQ8NBN3 555 aa10.49□□□□□ -0.73
RAF1-212ENST00000494557 OTUD7AQ8TE49 926 aaPredicted RBP10.49□□□□□ -0.73
RAF1-212ENST00000494557 LRRCC1Q9C099 1032 aa10.49□□□□□ -0.73
RAF1-212ENST00000494557 SOS2Q07890 1332 aaPredicted RBP10.49□□□□□ -0.73
RAF1-212ENST00000494557 SPATA31A3Q5VYP0 1347 aa10.49□□□□□ -0.73
RAF1-212ENST00000494557 CHMLP26374 656 aa10.48□□□□□ -0.73
RAF1-212ENST00000494557 RABL6Q3YEC7 729 aaPredicted RBP10.48□□□□□ -0.73
RAF1-212ENST00000494557 MED23Q9ULK4 1368 aa10.48□□□□□ -0.73
RAF1-212ENST00000494557 REC8O95072 547 aa10.48□□□□□ -0.73
RAF1-212ENST00000494557 HSPA4P34932 840 aa10.48□□□□□ -0.73
RAF1-212ENST00000494557 PLEKHO1Q53GL0 409 aaPredicted RBP10.48□□□□□ -0.73
RAF1-212ENST00000494557 TNPO1Q92973 898 aaKnown RBP10.48□□□□□ -0.73
RAF1-212ENST00000494557 KAZALD1Q96I82 304 aa10.48□□□□□ -0.73
RAF1-212ENST00000494557 TTC14Q96N46 770 aa10.48□□□□□ -0.73
RAF1-212ENST00000494557 MX1P20591 662 aa10.48□□□□□ -0.73
RAF1-212ENST00000494557 STK31Q9BXU1 1019 aa10.48□□□□□ -0.73
RAF1-212ENST00000494557 RAD50Q92878 1312 aa10.47□□□□□ -0.73
RAF1-212ENST00000494557 CASP7P55210 303 aa10.47□□□□□ -0.73
RAF1-212ENST00000494557 ZNF445P59923 1031 aa10.47□□□□□ -0.73
RAF1-212ENST00000494557 C16orf71Q8IYS4 520 aaPredicted RBP10.47□□□□□ -0.73
RAF1-212ENST00000494557 NPHP3Q7Z494 1330 aa10.47□□□□□ -0.73
RAF1-212ENST00000494557 TSGA10IPQ3SY00 556 aa10.47□□□□□ -0.73
RAF1-212ENST00000494557 DBF4Q9UBU7 674 aaPredicted RBP10.47□□□□□ -0.73
RAF1-212ENST00000494557 AXIN2Q9Y2T1 843 aa10.47□□□□□ -0.73
RAF1-212ENST00000494557 MAST2Q6P0Q8 1798 aa10.47□□□□□ -0.73
RAF1-212ENST00000494557 PDE4CQ08493 712 aa10.46□□□□□ -0.73
RAF1-212ENST00000494557 ZDHHC9Q9Y397 364 aa10.46□□□□□ -0.73
RAF1-212ENST00000494557 HYPKQ9NX55 129 aa10.46□□□□□ -0.73
RAF1-212ENST00000494557 KLHL40Q2TBA0 621 aa10.46□□□□□ -0.74
RAF1-212ENST00000494557 L1TD1Q5T7N2 865 aaKnown RBP10.46□□□□□ -0.74
RAF1-212ENST00000494557 FAM43AQ8N2R8 423 aa10.46□□□□□ -0.74
RAF1-212ENST00000494557 TM6SF1Q9BZW5 370 aa10.46□□□□□ -0.74
RAF1-212ENST00000494557 LGR6Q9HBX8 967 aa10.46□□□□□ -0.74
RAF1-212ENST00000494557 TPRNQ4KMQ1 711 aa10.45□□□□□ -0.74
RAF1-212ENST00000494557 KSR2Q6VAB6 950 aa10.45□□□□□ -0.74
RAF1-212ENST00000494557 RGS22Q8NE09 1264 aa10.45□□□□□ -0.74
RAF1-212ENST00000494557 DNAAF4Q8WXU2 420 aa10.45□□□□□ -0.74
RAF1-212ENST00000494557 DDX21Q9NR30 783 aaKnown RBP eCLIP10.45□□□□□ -0.74
RAF1-212ENST00000494557 LTBP4Q8N2S1 1624 aa10.45□□□□□ -0.74
RAF1-212ENST00000494557 LSG1Q9H089 658 aaKnown RBP10.45□□□□□ -0.74
RAF1-212ENST00000494557 SLC52A2Q9HAB3 445 aa10.45□□□□□ -0.74
RAF1-212ENST00000494557 LY75O60449 1722 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms