RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 ZBTB1Q9Y2K1 713 aa17.5■□□□□ 0.39
ERCC3-209ENST00000494464 BTBD11A6QL63 1104 aa17.49■□□□□ 0.39
ERCC3-209ENST00000494464 YY1P25490 414 aa17.49■□□□□ 0.39
ERCC3-209ENST00000494464 FMNL2Q96PY5 1086 aa17.49■□□□□ 0.39
ERCC3-209ENST00000494464 TEX13AQ9BXU3 409 aaPredicted RBP17.49■□□□□ 0.39
ERCC3-209ENST00000494464 STARD3NLO95772 234 aa17.48■□□□□ 0.39
ERCC3-209ENST00000494464 GPR162Q16538 588 aa17.48■□□□□ 0.39
ERCC3-209ENST00000494464 MCM10Q7L590 875 aa17.48■□□□□ 0.39
ERCC3-209ENST00000494464 LAMB4A4D0S4 1761 aa17.48■□□□□ 0.39
ERCC3-209ENST00000494464 MAPK8IP3Q9UPT6 1336 aa17.47■□□□□ 0.39
ERCC3-209ENST00000494464 SRP68Q9UHB9 627 aaKnown RBP17.47■□□□□ 0.39
ERCC3-209ENST00000494464 NFE2L2Q16236 605 aa17.46■□□□□ 0.39
ERCC3-209ENST00000494464 PXDNLA1KZ92 1463 aa17.46■□□□□ 0.39
ERCC3-209ENST00000494464 DCTN1Q14203 1278 aa17.45■□□□□ 0.38
ERCC3-209ENST00000494464 PRKRIP1Q9H875 184 aaPredicted RBP17.45■□□□□ 0.38
ERCC3-209ENST00000494464 NRXN2Q9P2S2 1712 aa17.45■□□□□ 0.38
ERCC3-209ENST00000494464 BRCA1P38398 1863 aaKnown RBP17.45■□□□□ 0.38
ERCC3-209ENST00000494464 BCORQ6W2J9 1755 aa17.44■□□□□ 0.38
ERCC3-209ENST00000494464 KCNQ3O43525 872 aa17.44■□□□□ 0.38
ERCC3-209ENST00000494464 ZPR1O75312 459 aa17.44■□□□□ 0.38
ERCC3-209ENST00000494464 YBX3P16989 372 aaKnown RBP eCLIP17.44■□□□□ 0.38
ERCC3-209ENST00000494464 FKBP8Q14318 412 aa17.44■□□□□ 0.38
ERCC3-209ENST00000494464 NARFQ9UHQ1 456 aa17.44■□□□□ 0.38
ERCC3-209ENST00000494464 PARP3Q9Y6F1 533 aa17.44■□□□□ 0.38
ERCC3-209ENST00000494464 N4BP2Q86UW6 1770 aaPredicted RBP17.44■□□□□ 0.38
ERCC3-209ENST00000494464 GRIN3BO60391 1043 aa17.43■□□□□ 0.38
ERCC3-209ENST00000494464 EIF5P55010 431 aaKnown RBP17.43■□□□□ 0.38
ERCC3-209ENST00000494464 PELP1Q8IZL8 1130 aaKnown RBP17.43■□□□□ 0.38
ERCC3-209ENST00000494464 AFDNP55196 1824 aaKnown RBP17.43■□□□□ 0.38
ERCC3-209ENST00000494464 TAF7Q15545 349 aaPredicted RBP17.42■□□□□ 0.38
ERCC3-209ENST00000494464 USPL1Q5W0Q7 1092 aa17.42■□□□□ 0.38
ERCC3-209ENST00000494464 A0A087WZG4 1122 aa17.41■□□□□ 0.38
ERCC3-209ENST00000494464 CANXP27824 592 aaKnown RBP17.41■□□□□ 0.38
ERCC3-209ENST00000494464 IL6STP40189 918 aaPredicted RBP17.41■□□□□ 0.38
ERCC3-209ENST00000494464 TGFB2P61812 414 aa17.41■□□□□ 0.38
ERCC3-209ENST00000494464 DDR1Q08345 913 aa17.41■□□□□ 0.38
ERCC3-209ENST00000494464 TM4SF1P30408 202 aa17.4■□□□□ 0.38
ERCC3-209ENST00000494464 PNISRQ8TF01 805 aaKnown RBP17.4■□□□□ 0.38
ERCC3-209ENST00000494464 POLRMTO00411 1230 aaKnown RBP17.4■□□□□ 0.38
ERCC3-209ENST00000494464 SNRPA1P09661 255 aaKnown RBP17.4■□□□□ 0.38
ERCC3-209ENST00000494464 BCL2L12Q9HB09 334 aa17.4■□□□□ 0.38
ERCC3-209ENST00000494464 DLEC1Q9Y238 1755 aa17.38■□□□□ 0.37
ERCC3-209ENST00000494464 NFIXQ14938 502 aa17.38■□□□□ 0.37
ERCC3-209ENST00000494464 WDR43Q15061 677 aaKnown RBP eCLIP17.38■□□□□ 0.37
ERCC3-209ENST00000494464 USP16Q9Y5T5 823 aa17.38■□□□□ 0.37
ERCC3-209ENST00000494464 ARFGEF1Q9Y6D6 1849 aa17.37■□□□□ 0.37
ERCC3-209ENST00000494464 PRAMEF22A3QJZ6 481 aa17.37■□□□□ 0.37
ERCC3-209ENST00000494464 A1BGP04217 495 aa17.37■□□□□ 0.37
ERCC3-209ENST00000494464 TMPOP42166 694 aaKnown RBP17.37■□□□□ 0.37
ERCC3-209ENST00000494464 LMOD3Q0VAK6 560 aa17.37■□□□□ 0.37
ERCC3-209ENST00000494464 THUMPD2Q9BTF0 503 aaKnown RBP17.37■□□□□ 0.37
ERCC3-209ENST00000494464 RIPK4P57078 832 aa17.36■□□□□ 0.37
ERCC3-209ENST00000494464 NPM2Q86SE8 214 aaKnown RBP17.35■□□□□ 0.37
ERCC3-209ENST00000494464 RUNDC1Q96C34 613 aa17.35■□□□□ 0.37
ERCC3-209ENST00000494464 MIS18AQ9NYP9 233 aa17.35■□□□□ 0.37
ERCC3-209ENST00000494464 DPEP1P16444 411 aa17.34■□□□□ 0.37
ERCC3-209ENST00000494464 EIF4A1P60842 406 aaKnown RBP17.34■□□□□ 0.37
ERCC3-209ENST00000494464 ZNF784Q8NCA9 323 aaPredicted RBP17.34■□□□□ 0.37
ERCC3-209ENST00000494464 ZNF330Q9Y3S2 320 aaPredicted RBP17.34■□□□□ 0.37
ERCC3-209ENST00000494464 A0A0G2JLW4 131 aa17.33■□□□□ 0.36
ERCC3-209ENST00000494464 CAMTA2O94983 1202 aa17.33■□□□□ 0.36
ERCC3-209ENST00000494464 CCDC146Q8IYE0 955 aa17.33■□□□□ 0.36
ERCC3-209ENST00000494464 BABAM1Q9NWV8 329 aa17.33■□□□□ 0.36
ERCC3-209ENST00000494464 ADAMTS8Q9UP79 889 aa17.33■□□□□ 0.36
ERCC3-209ENST00000494464 TBC1D2BQ9UPU7 963 aa17.33■□□□□ 0.36
ERCC3-209ENST00000494464 ANKRD31Q8N7Z5 1873 aa17.33■□□□□ 0.36
ERCC3-209ENST00000494464 CARMIL3Q8ND23 1372 aa17.33■□□□□ 0.36
ERCC3-209ENST00000494464 RGL2O15211 777 aa17.32■□□□□ 0.36
ERCC3-209ENST00000494464 GIGYF1O75420 1035 aaPredicted RBP17.32■□□□□ 0.36
ERCC3-209ENST00000494464 SERPINB2P05120 415 aa17.32■□□□□ 0.36
ERCC3-209ENST00000494464 KCNA3P22001 575 aa17.32■□□□□ 0.36
ERCC3-209ENST00000494464 DZIP3Q86Y13 1208 aaKnown RBP17.32■□□□□ 0.36
ERCC3-209ENST00000494464 WWC3Q9ULE0 1092 aa17.32■□□□□ 0.36
ERCC3-209ENST00000494464 NBPF26B4DH59 902 aa17.31■□□□□ 0.36
ERCC3-209ENST00000494464 PIP4K2AP48426 406 aaPredicted RBP17.31■□□□□ 0.36
ERCC3-209ENST00000494464 TBC1D9BQ66K14 1250 aa17.31■□□□□ 0.36
ERCC3-209ENST00000494464 NBPF10Q6P3W6 841 aaKnown RBP17.31■□□□□ 0.36
ERCC3-209ENST00000494464 NBPF15Q8N660 670 aa17.31■□□□□ 0.36
ERCC3-209ENST00000494464 ADCY9O60503 1353 aa17.31■□□□□ 0.36
ERCC3-209ENST00000494464 TSPYL4Q9UJ04 414 aa17.3■□□□□ 0.36
ERCC3-209ENST00000494464 BCS1LQ9Y276 419 aa17.3■□□□□ 0.36
ERCC3-209ENST00000494464 CLEC4GQ6UXB4 293 aa17.29■□□□□ 0.36
ERCC3-209ENST00000494464 PIM2Q9P1W9 311 aa17.29■□□□□ 0.36
ERCC3-209ENST00000494464 RRP7AQ9Y3A4 280 aaKnown RBP17.29■□□□□ 0.36
ERCC3-209ENST00000494464 COL11A2P13942 1736 aaPredicted RBP17.29■□□□□ 0.36
ERCC3-209ENST00000494464 ANP32CO43423 234 aa17.28■□□□□ 0.36
ERCC3-209ENST00000494464 BICDL1Q6ZP65 573 aa17.28■□□□□ 0.36
ERCC3-209ENST00000494464 TRIM35Q9UPQ4 493 aa17.28■□□□□ 0.36
ERCC3-209ENST00000494464 ZNF652Q9Y2D9 606 aa17.28■□□□□ 0.36
ERCC3-209ENST00000494464 ERBB4Q15303 1308 aa17.28■□□□□ 0.36
ERCC3-209ENST00000494464 CCER2I3L3R5 266 aa17.27■□□□□ 0.35
ERCC3-209ENST00000494464 CENPBP07199 599 aaPredicted RBP17.27■□□□□ 0.35
ERCC3-209ENST00000494464 CHRNA5P30532 468 aa17.27■□□□□ 0.35
ERCC3-209ENST00000494464 NEUROD2Q15784 382 aa17.27■□□□□ 0.35
ERCC3-209ENST00000494464 DALRD3Q5D0E6 543 aaKnown RBP17.27■□□□□ 0.35
ERCC3-209ENST00000494464 SETDB2Q96T68 719 aa17.27■□□□□ 0.35
ERCC3-209ENST00000494464 NUP98P52948 1817 aa17.26■□□□□ 0.35
ERCC3-209ENST00000494464 ATP10DQ9P241 1426 aa17.26■□□□□ 0.35
ERCC3-209ENST00000494464 PRR5LQ6MZQ0 368 aa17.26■□□□□ 0.35
ERCC3-209ENST00000494464 PDZRN3Q9UPQ7 1066 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms