RNA–Protein interactions for RNA: ENST00000494299.1

SAPCD1-211, Transcript of suppressor APC domain containing 1, humanhuman

TSL 3

Gene SAPCD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAPCD1-211ENST00000494299 TTC5Q8N0Z6 440 aa17.64■□□□□ 0.41
SAPCD1-211ENST00000494299 FMNL2Q96PY5 1086 aa17.64■□□□□ 0.41
SAPCD1-211ENST00000494299 COL15A1P39059 1388 aa17.64■□□□□ 0.41
SAPCD1-211ENST00000494299 DCTN1Q14203 1278 aa17.63■□□□□ 0.41
SAPCD1-211ENST00000494299 RTF1Q92541 710 aaKnown RBP17.63■□□□□ 0.41
SAPCD1-211ENST00000494299 PNNQ9H307 717 aaKnown RBP17.63■□□□□ 0.41
SAPCD1-211ENST00000494299 SRP68Q9UHB9 627 aaKnown RBP17.63■□□□□ 0.41
SAPCD1-211ENST00000494299 NARFQ9UHQ1 456 aa17.63■□□□□ 0.41
SAPCD1-211ENST00000494299 SCN7AQ01118 1682 aa17.62■□□□□ 0.41
SAPCD1-211ENST00000494299 DCAF8L1A6NGE4 600 aa17.62■□□□□ 0.41
SAPCD1-211ENST00000494299 STARD3NLO95772 234 aa17.62■□□□□ 0.41
SAPCD1-211ENST00000494299 FKBP8Q14318 412 aa17.62■□□□□ 0.41
SAPCD1-211ENST00000494299 TAF7Q15545 349 aaPredicted RBP17.62■□□□□ 0.41
SAPCD1-211ENST00000494299 BCL2L12Q9HB09 334 aa17.62■□□□□ 0.41
SAPCD1-211ENST00000494299 AFDNP55196 1824 aaKnown RBP17.62■□□□□ 0.41
SAPCD1-211ENST00000494299 YBX3P16989 372 aaKnown RBP eCLIP17.61■□□□□ 0.41
SAPCD1-211ENST00000494299 PXDNLA1KZ92 1463 aa17.61■□□□□ 0.41
SAPCD1-211ENST00000494299 LAMB4A4D0S4 1761 aa17.61■□□□□ 0.41
SAPCD1-211ENST00000494299 IL6STP40189 918 aaPredicted RBP17.6■□□□□ 0.41
SAPCD1-211ENST00000494299 DDR1Q08345 913 aa17.6■□□□□ 0.41
SAPCD1-211ENST00000494299 BCORQ6W2J9 1755 aa17.59■□□□□ 0.41
SAPCD1-211ENST00000494299 N4BP2Q86UW6 1770 aaPredicted RBP17.58■□□□□ 0.41
SAPCD1-211ENST00000494299 POLRMTO00411 1230 aaKnown RBP17.58■□□□□ 0.4
SAPCD1-211ENST00000494299 YY1P25490 414 aa17.58■□□□□ 0.4
SAPCD1-211ENST00000494299 TGFB2P61812 414 aa17.58■□□□□ 0.4
SAPCD1-211ENST00000494299 USP16Q9Y5T5 823 aa17.58■□□□□ 0.4
SAPCD1-211ENST00000494299 SNRPA1P09661 255 aaKnown RBP17.57■□□□□ 0.4
SAPCD1-211ENST00000494299 TMPOP42166 694 aaKnown RBP17.57■□□□□ 0.4
SAPCD1-211ENST00000494299 USPL1Q5W0Q7 1092 aa17.57■□□□□ 0.4
SAPCD1-211ENST00000494299 KLHL34Q8N239 644 aa17.57■□□□□ 0.4
SAPCD1-211ENST00000494299 PRAMEF22A3QJZ6 481 aa17.56■□□□□ 0.4
SAPCD1-211ENST00000494299 GRIN3BO60391 1043 aa17.56■□□□□ 0.4
SAPCD1-211ENST00000494299 A1BGP04217 495 aa17.56■□□□□ 0.4
SAPCD1-211ENST00000494299 NEFMP07197 916 aa17.56■□□□□ 0.4
SAPCD1-211ENST00000494299 KCNA3P22001 575 aa17.56■□□□□ 0.4
SAPCD1-211ENST00000494299 GPR162Q16538 588 aa17.56■□□□□ 0.4
SAPCD1-211ENST00000494299 PNISRQ8TF01 805 aaKnown RBP17.56■□□□□ 0.4
SAPCD1-211ENST00000494299 BABAM1Q9NWV8 329 aa17.56■□□□□ 0.4
SAPCD1-211ENST00000494299 MAPK8IP3Q9UPT6 1336 aa17.55■□□□□ 0.4
SAPCD1-211ENST00000494299 A0A087WZG4 1122 aa17.55■□□□□ 0.4
SAPCD1-211ENST00000494299 RGL2O15211 777 aa17.55■□□□□ 0.4
SAPCD1-211ENST00000494299 ZPR1O75312 459 aa17.55■□□□□ 0.4
SAPCD1-211ENST00000494299 CANXP27824 592 aaKnown RBP17.55■□□□□ 0.4
SAPCD1-211ENST00000494299 ADAMTS8Q9UP79 889 aa17.55■□□□□ 0.4
SAPCD1-211ENST00000494299 PARP3Q9Y6F1 533 aa17.55■□□□□ 0.4
SAPCD1-211ENST00000494299 ARFGEF1Q9Y6D6 1849 aa17.55■□□□□ 0.4
SAPCD1-211ENST00000494299 DLEC1Q9Y238 1755 aa17.54■□□□□ 0.4
SAPCD1-211ENST00000494299 NBPF26B4DH59 902 aa17.54■□□□□ 0.4
SAPCD1-211ENST00000494299 EIF4A1P60842 406 aaKnown RBP17.54■□□□□ 0.4
SAPCD1-211ENST00000494299 NFIXQ14938 502 aa17.54■□□□□ 0.4
SAPCD1-211ENST00000494299 NBPF10Q6P3W6 841 aaKnown RBP17.54■□□□□ 0.4
SAPCD1-211ENST00000494299 NBPF15Q8N660 670 aa17.54■□□□□ 0.4
SAPCD1-211ENST00000494299 THUMPD2Q9BTF0 503 aaKnown RBP17.54■□□□□ 0.4
SAPCD1-211ENST00000494299 ZNF316A6NFI3 1004 aaPredicted RBP17.53■□□□□ 0.4
SAPCD1-211ENST00000494299 GIGYF1O75420 1035 aaPredicted RBP17.53■□□□□ 0.4
SAPCD1-211ENST00000494299 CAMTA2O94983 1202 aa17.53■□□□□ 0.4
SAPCD1-211ENST00000494299 RUNDC1Q96C34 613 aa17.53■□□□□ 0.4
SAPCD1-211ENST00000494299 MIS18AQ9NYP9 233 aa17.53■□□□□ 0.4
SAPCD1-211ENST00000494299 TRIM35Q9UPQ4 493 aa17.53■□□□□ 0.4
SAPCD1-211ENST00000494299 RIPK4P57078 832 aa17.52■□□□□ 0.4
SAPCD1-211ENST00000494299 ANKRD31Q8N7Z5 1873 aa17.52■□□□□ 0.39
SAPCD1-211ENST00000494299 LMOD3Q0VAK6 560 aa17.5■□□□□ 0.39
SAPCD1-211ENST00000494299 CLEC4GQ6UXB4 293 aa17.5■□□□□ 0.39
SAPCD1-211ENST00000494299 ADCY9O60503 1353 aa17.5■□□□□ 0.39
SAPCD1-211ENST00000494299 A0A0G2JLW4 131 aa17.49■□□□□ 0.39
SAPCD1-211ENST00000494299 DPEP1P16444 411 aa17.49■□□□□ 0.39
SAPCD1-211ENST00000494299 CHL1O00533 1208 aa17.48■□□□□ 0.39
SAPCD1-211ENST00000494299 WDR43Q15061 677 aaKnown RBP eCLIP17.48■□□□□ 0.39
SAPCD1-211ENST00000494299 TBC1D9BQ66K14 1250 aa17.48■□□□□ 0.39
SAPCD1-211ENST00000494299 LRP10Q7Z4F1 713 aa17.48■□□□□ 0.39
SAPCD1-211ENST00000494299 ZNF784Q8NCA9 323 aaPredicted RBP17.48■□□□□ 0.39
SAPCD1-211ENST00000494299 TBC1D2BQ9UPU7 963 aa17.48■□□□□ 0.39
SAPCD1-211ENST00000494299 SERPINB2P05120 415 aa17.47■□□□□ 0.39
SAPCD1-211ENST00000494299 CCDC146Q8IYE0 955 aa17.47■□□□□ 0.39
SAPCD1-211ENST00000494299 ERBB4Q15303 1308 aa17.47■□□□□ 0.39
SAPCD1-211ENST00000494299 CARMIL3Q8ND23 1372 aa17.46■□□□□ 0.39
SAPCD1-211ENST00000494299 CCDC184Q52MB2 194 aa17.46■□□□□ 0.39
SAPCD1-211ENST00000494299 DZIP3Q86Y13 1208 aaKnown RBP17.46■□□□□ 0.39
SAPCD1-211ENST00000494299 NUP98P52948 1817 aa17.46■□□□□ 0.39
SAPCD1-211ENST00000494299 PIP4K2AP48426 406 aaPredicted RBP17.45■□□□□ 0.38
SAPCD1-211ENST00000494299 PELP1Q8IZL8 1130 aaKnown RBP17.45■□□□□ 0.38
SAPCD1-211ENST00000494299 ZNF853P0CG23 659 aa17.44■□□□□ 0.38
SAPCD1-211ENST00000494299 PDIA6Q15084 440 aa17.44■□□□□ 0.38
SAPCD1-211ENST00000494299 TSPYL4Q9UJ04 414 aa17.44■□□□□ 0.38
SAPCD1-211ENST00000494299 RRP7AQ9Y3A4 280 aaKnown RBP17.44■□□□□ 0.38
SAPCD1-211ENST00000494299 COL11A2P13942 1736 aaPredicted RBP17.44■□□□□ 0.38
SAPCD1-211ENST00000494299 PRR5LQ6MZQ0 368 aa17.43■□□□□ 0.38
SAPCD1-211ENST00000494299 PIM2Q9P1W9 311 aa17.43■□□□□ 0.38
SAPCD1-211ENST00000494299 SBF1O95248 1867 aa17.43■□□□□ 0.38
SAPCD1-211ENST00000494299 ERVV-1B6SEH8 477 aa17.42■□□□□ 0.38
SAPCD1-211ENST00000494299 NCBP3Q53F19 620 aaKnown RBP17.42■□□□□ 0.38
SAPCD1-211ENST00000494299 ATP10DQ9P241 1426 aa17.41■□□□□ 0.38
SAPCD1-211ENST00000494299 KLRG2A4D1S0 409 aaPredicted RBP17.41■□□□□ 0.38
SAPCD1-211ENST00000494299 CHRNA5P30532 468 aa17.41■□□□□ 0.38
SAPCD1-211ENST00000494299 CFAP44Q96MT7 982 aa17.41■□□□□ 0.38
SAPCD1-211ENST00000494299 BRIP1Q9BX63 1249 aa17.41■□□□□ 0.38
SAPCD1-211ENST00000494299 PDZRN3Q9UPQ7 1066 aa17.41■□□□□ 0.38
SAPCD1-211ENST00000494299 ARFGEF2Q9Y6D5 1785 aa17.4■□□□□ 0.38
SAPCD1-211ENST00000494299 APAF1O14727 1248 aa17.4■□□□□ 0.38
SAPCD1-211ENST00000494299 HLFQ16534 295 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms