RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 CDC14CA4D256 554 aa4.41□□□□□ -1.7
LMNB1-207ENST00000494185 FAM181BA6NEQ2 426 aa4.41□□□□□ -1.7
LMNB1-207ENST00000494185 SFI1A8K8P3 1242 aa4.41□□□□□ -1.7
LMNB1-207ENST00000494185 TMEM229AB2RXF0 380 aa4.41□□□□□ -1.7
LMNB1-207ENST00000494185 PATL2C9JE40 543 aaKnown RBP4.41□□□□□ -1.7
LMNB1-207ENST00000494185 TERTO14746 1132 aaKnown RBP4.41□□□□□ -1.7
LMNB1-207ENST00000494185 PTCD1O75127 700 aaKnown RBP4.41□□□□□ -1.7
LMNB1-207ENST00000494185 DKK1O94907 266 aa4.41□□□□□ -1.7
LMNB1-207ENST00000494185 STAU1O95793 577 aaKnown RBP4.41□□□□□ -1.7
LMNB1-207ENST00000494185 SNRPBP14678 240 aaKnown RBP4.41□□□□□ -1.7
LMNB1-207ENST00000494185 IGFBP4P22692 258 aa4.41□□□□□ -1.7
LMNB1-207ENST00000494185 ITGA6P23229 1130 aa4.41□□□□□ -1.7
LMNB1-207ENST00000494185 ARSJQ5FYB0 599 aaPredicted RBP4.41□□□□□ -1.7
LMNB1-207ENST00000494185 SV2AQ7L0J3 742 aa4.41□□□□□ -1.7
LMNB1-207ENST00000494185 SLC9A9Q8IVB4 645 aa4.41□□□□□ -1.7
LMNB1-207ENST00000494185 CCDC155Q8N6L0 562 aa4.41□□□□□ -1.7
LMNB1-207ENST00000494185 RETREG2Q8NC44 543 aa4.41□□□□□ -1.7
LMNB1-207ENST00000494185 STK32AQ8WU08 396 aa4.41□□□□□ -1.7
LMNB1-207ENST00000494185 GAS2L1Q99501 681 aaPredicted RBP4.41□□□□□ -1.7
LMNB1-207ENST00000494185 FHDC1Q9C0D6 1143 aaPredicted RBP4.41□□□□□ -1.7
LMNB1-207ENST00000494185 ZMIZ1Q9ULJ6 1067 aa4.41□□□□□ -1.7
LMNB1-207ENST00000494185 EPB42P16452 691 aa4.4□□□□□ -1.71
LMNB1-207ENST00000494185 HIRAP54198 1017 aaPredicted RBP4.4□□□□□ -1.71
LMNB1-207ENST00000494185 POU4F2Q12837 409 aa4.4□□□□□ -1.71
LMNB1-207ENST00000494185 TEAD4Q15561 434 aa4.4□□□□□ -1.71
LMNB1-207ENST00000494185 TMEM164Q5U3C3 297 aa4.4□□□□□ -1.71
LMNB1-207ENST00000494185 C1orf53Q5VUE5 145 aa4.4□□□□□ -1.71
LMNB1-207ENST00000494185 TRIM22Q8IYM9 498 aa4.4□□□□□ -1.71
LMNB1-207ENST00000494185 RHPN1Q8TCX5 695 aa4.4□□□□□ -1.71
LMNB1-207ENST00000494185 NUCKS1Q9H1E3 243 aaKnown RBP4.4□□□□□ -1.71
LMNB1-207ENST00000494185 SLC35F4A4IF30 521 aa4.39□□□□□ -1.71
LMNB1-207ENST00000494185 H3BM21 787 aa4.39□□□□□ -1.71
LMNB1-207ENST00000494185 WFS1O76024 890 aa4.39□□□□□ -1.71
LMNB1-207ENST00000494185 RHOQP17081 205 aa4.39□□□□□ -1.71
LMNB1-207ENST00000494185 C4orf17Q53FE4 359 aa4.39□□□□□ -1.71
LMNB1-207ENST00000494185 NLRP8Q86W28 1048 aa4.39□□□□□ -1.71
LMNB1-207ENST00000494185 HOMEZQ8IX15 550 aa4.39□□□□□ -1.71
LMNB1-207ENST00000494185 TSEN2Q8NCE0 465 aaKnown RBP4.39□□□□□ -1.71
LMNB1-207ENST00000494185 CHMP7Q8WUX9 453 aaPredicted RBP4.39□□□□□ -1.71
LMNB1-207ENST00000494185 L3MBTL2Q969R5 705 aa4.39□□□□□ -1.71
LMNB1-207ENST00000494185 CRISPLD1Q9H336 500 aa4.39□□□□□ -1.71
LMNB1-207ENST00000494185 FAM13BQ9NYF5 915 aa4.39□□□□□ -1.71
LMNB1-207ENST00000494185 HRH3Q9Y5N1 445 aa4.39□□□□□ -1.71
LMNB1-207ENST00000494185 PPFIA3O75145 1194 aa4.38□□□□□ -1.71
LMNB1-207ENST00000494185 NOS2P35228 1153 aa4.38□□□□□ -1.71
LMNB1-207ENST00000494185 PHKA2P46019 1235 aa4.38□□□□□ -1.71
LMNB1-207ENST00000494185 INSM1Q01101 510 aaPredicted RBP4.38□□□□□ -1.71
LMNB1-207ENST00000494185 TNS4Q8IZW8 715 aa4.38□□□□□ -1.71
LMNB1-207ENST00000494185 SCG3Q8WXD2 468 aaKnown RBP4.38□□□□□ -1.71
LMNB1-207ENST00000494185 NANOS1Q8WY41 292 aaKnown RBP4.38□□□□□ -1.71
LMNB1-207ENST00000494185 TSPAN10Q9H1Z9 355 aaPredicted RBP4.38□□□□□ -1.71
LMNB1-207ENST00000494185 GPAMQ9HCL2 828 aa4.38□□□□□ -1.71
LMNB1-207ENST00000494185 ATAD2Q6PL18 1390 aa4.38□□□□□ -1.71
LMNB1-207ENST00000494185 TMEM88BA6NKF7 163 aa4.37□□□□□ -1.71
LMNB1-207ENST00000494185 SOBPA7XYQ1 873 aa4.37□□□□□ -1.71
LMNB1-207ENST00000494185 VSIG8P0DPA2 414 aa4.37□□□□□ -1.71
LMNB1-207ENST00000494185 ARID4AP29374 1257 aaPredicted RBP4.37□□□□□ -1.71
LMNB1-207ENST00000494185 EPHA4P54764 986 aa4.37□□□□□ -1.71
LMNB1-207ENST00000494185 FOXK2Q01167 660 aa4.37□□□□□ -1.71
LMNB1-207ENST00000494185 FAM69CQ0P6D2 419 aa4.37□□□□□ -1.71
LMNB1-207ENST00000494185 RTN1Q16799 776 aa4.37□□□□□ -1.71
LMNB1-207ENST00000494185 TTC16Q8NEE8 873 aa4.37□□□□□ -1.71
LMNB1-207ENST00000494185 CLP1Q92989 425 aaKnown RBP4.37□□□□□ -1.71
LMNB1-207ENST00000494185 COL26A1Q96A83 441 aa4.37□□□□□ -1.71
LMNB1-207ENST00000494185 ATXN7L1Q9ULK2 861 aaPredicted RBP4.37□□□□□ -1.71
LMNB1-207ENST00000494185 PIK3R2O00459 728 aa4.36□□□□□ -1.71
LMNB1-207ENST00000494185 LCE2BO14633 110 aa4.36□□□□□ -1.71
LMNB1-207ENST00000494185 PDIA4P13667 645 aaKnown RBP4.36□□□□□ -1.71
LMNB1-207ENST00000494185 MSX1P28360 303 aa4.36□□□□□ -1.71
LMNB1-207ENST00000494185 MAP2K3P46734 347 aa4.36□□□□□ -1.71
LMNB1-207ENST00000494185 LAMC2Q13753 1193 aa4.36□□□□□ -1.71
LMNB1-207ENST00000494185 ABTB2Q8N961 1025 aa4.36□□□□□ -1.71
LMNB1-207ENST00000494185 CFHR5Q9BXR6 569 aa4.36□□□□□ -1.71
LMNB1-207ENST00000494185 EFCC1Q9HA90 598 aa4.36□□□□□ -1.71
LMNB1-207ENST00000494185 IQSEC3Q9UPP2 1182 aaPredicted RBP4.36□□□□□ -1.71
LMNB1-207ENST00000494185 CARNS1A5YM72 827 aa4.35□□□□□ -1.71
LMNB1-207ENST00000494185 PRMT3O60678 531 aa4.35□□□□□ -1.71
LMNB1-207ENST00000494185 LGR5O75473 907 aa4.35□□□□□ -1.71
LMNB1-207ENST00000494185 PCSK2P16519 638 aa4.35□□□□□ -1.71
LMNB1-207ENST00000494185 ATP2B4P23634 1241 aa4.35□□□□□ -1.71
LMNB1-207ENST00000494185 MAP3K10Q02779 954 aa4.35□□□□□ -1.71
LMNB1-207ENST00000494185 SAMD5Q5TGI4 173 aa4.35□□□□□ -1.71
LMNB1-207ENST00000494185 IER5Q5VY09 327 aa4.35□□□□□ -1.71
LMNB1-207ENST00000494185 TREML4Q6UXN2 200 aa4.35□□□□□ -1.71
LMNB1-207ENST00000494185 ZNF837Q96EG3 531 aaPredicted RBP4.35□□□□□ -1.71
LMNB1-207ENST00000494185 C2orf49Q9BVC5 232 aaPredicted RBP4.35□□□□□ -1.71
LMNB1-207ENST00000494185 PHACTR1Q9C0D0 580 aa4.35□□□□□ -1.71
LMNB1-207ENST00000494185 ENAMQ9NRM1 1142 aa4.35□□□□□ -1.71
LMNB1-207ENST00000494185 MBIPQ9NS73 344 aa4.35□□□□□ -1.71
LMNB1-207ENST00000494185 PCDHGC4Q9Y5F7 938 aa4.35□□□□□ -1.71
LMNB1-207ENST00000494185 A0A1W2PNR3 127 aa4.34□□□□□ -1.71
LMNB1-207ENST00000494185 POTECB2RU33 542 aa4.34□□□□□ -1.71
LMNB1-207ENST00000494185 EML1O00423 815 aa4.34□□□□□ -1.71
LMNB1-207ENST00000494185 ATXN7O15265 892 aaPredicted RBP4.34□□□□□ -1.71
LMNB1-207ENST00000494185 RPLP1P05386 114 aaKnown RBP4.34□□□□□ -1.71
LMNB1-207ENST00000494185 FAM157BP0CG42 384 aa4.34□□□□□ -1.71
LMNB1-207ENST00000494185 MX2P20592 715 aa4.34□□□□□ -1.71
LMNB1-207ENST00000494185 WEE1P30291 646 aa4.34□□□□□ -1.71
LMNB1-207ENST00000494185 NFX1Q12986 1120 aaKnown RBP4.34□□□□□ -1.71
LMNB1-207ENST00000494185 TBCELQ5QJ74 424 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms