RNA–Protein interactions for RNA: ENST00000494058.5

SKIV2L-215, Transcript of Ski2 like RNA helicase, humanhuman

TSL 2

Gene SKIV2L, Length 867 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-215ENST00000494058 DUSP27Q5VZP5 1158 aa16.95■□□□□ 0.3
SKIV2L-215ENST00000494058 C5P01031 1676 aa16.94■□□□□ 0.3
SKIV2L-215ENST00000494058 A0A087WZG4 1122 aa16.94■□□□□ 0.3
SKIV2L-215ENST00000494058 CT47B1P0C2W7 299 aaPredicted RBP16.94■□□□□ 0.3
SKIV2L-215ENST00000494058 SSFA2P28290 1259 aa16.94■□□□□ 0.3
SKIV2L-215ENST00000494058 AKT1S1Q96B36 256 aa16.94■□□□□ 0.3
SKIV2L-215ENST00000494058 ZNF428Q96B54 188 aa16.94■□□□□ 0.3
SKIV2L-215ENST00000494058 USP16Q9Y5T5 823 aa16.94■□□□□ 0.3
SKIV2L-215ENST00000494058 GNPATO15228 680 aa16.93■□□□□ 0.3
SKIV2L-215ENST00000494058 RPS6KA4O75676 772 aa16.93■□□□□ 0.3
SKIV2L-215ENST00000494058 IL6STP40189 918 aaPredicted RBP16.93■□□□□ 0.3
SKIV2L-215ENST00000494058 TWISTNBQ3B726 338 aaPredicted RBP16.93■□□□□ 0.3
SKIV2L-215ENST00000494058 TRAPPC3LQ5T215 181 aa16.93■□□□□ 0.3
SKIV2L-215ENST00000494058 HDGFL1Q5TGJ6 251 aa16.93■□□□□ 0.3
SKIV2L-215ENST00000494058 CCDC30Q5VVM6 783 aa16.93■□□□□ 0.3
SKIV2L-215ENST00000494058 EIF2S2P20042 333 aaKnown RBP16.92■□□□□ 0.3
SKIV2L-215ENST00000494058 STK31Q9BXU1 1019 aa16.92■□□□□ 0.3
SKIV2L-215ENST00000494058 DBF4Q9UBU7 674 aaPredicted RBP16.92■□□□□ 0.3
SKIV2L-215ENST00000494058 C4BP0C0L5 1744 aa16.92■□□□□ 0.3
SKIV2L-215ENST00000494058 NUP188Q5SRE5 1749 aa16.92■□□□□ 0.3
SKIV2L-215ENST00000494058 CANXP27824 592 aaKnown RBP16.91■□□□□ 0.3
SKIV2L-215ENST00000494058 EXOSC9Q06265 439 aaKnown RBP16.91■□□□□ 0.3
SKIV2L-215ENST00000494058 INTS5Q6P9B9 1019 aaKnown RBP16.91■□□□□ 0.3
SKIV2L-215ENST00000494058 TRMT2AQ8IZ69 625 aaKnown RBP16.91■□□□□ 0.3
SKIV2L-215ENST00000494058 C8orf58Q8NAV2 365 aa16.91■□□□□ 0.3
SKIV2L-215ENST00000494058 SPINK5Q9NQ38 1064 aaPredicted RBP16.91■□□□□ 0.3
SKIV2L-215ENST00000494058 TJP1Q07157 1748 aa16.9■□□□□ 0.3
SKIV2L-215ENST00000494058 ELL2O00472 640 aaPredicted RBP16.9■□□□□ 0.3
SKIV2L-215ENST00000494058 RFC4P35249 363 aa16.9■□□□□ 0.3
SKIV2L-215ENST00000494058 TAF1LQ8IZX4 1826 aa16.9■□□□□ 0.3
SKIV2L-215ENST00000494058 COL5A3P25940 1745 aaPredicted RBP16.9■□□□□ 0.3
SKIV2L-215ENST00000494058 MSH5O43196 834 aa16.89■□□□□ 0.29
SKIV2L-215ENST00000494058 A1BGP04217 495 aa16.89■□□□□ 0.29
SKIV2L-215ENST00000494058 SLC16A10Q8TF71 515 aa16.89■□□□□ 0.29
SKIV2L-215ENST00000494058 CDCA7LQ96GN5 454 aa16.89■□□□□ 0.29
SKIV2L-215ENST00000494058 YTHDC1Q96MU7 727 aaKnown RBP16.89■□□□□ 0.29
SKIV2L-215ENST00000494058 DDX21Q9NR30 783 aaKnown RBP eCLIP16.89■□□□□ 0.29
SKIV2L-215ENST00000494058 HYPKQ9NX55 129 aa16.89■□□□□ 0.29
SKIV2L-215ENST00000494058 LAMB4A4D0S4 1761 aa16.89■□□□□ 0.29
SKIV2L-215ENST00000494058 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.88■□□□□ 0.29
SKIV2L-215ENST00000494058 PRAMEF22A3QJZ6 481 aa16.88■□□□□ 0.29
SKIV2L-215ENST00000494058 ZPR1O75312 459 aa16.88■□□□□ 0.29
SKIV2L-215ENST00000494058 ZNF827Q17R98 1081 aa16.88■□□□□ 0.29
SKIV2L-215ENST00000494058 ZBTB1Q9Y2K1 713 aa16.88■□□□□ 0.29
SKIV2L-215ENST00000494058 VAMP4O75379 141 aa16.87■□□□□ 0.29
SKIV2L-215ENST00000494058 R3HDM1Q15032 1099 aaKnown RBP16.87■□□□□ 0.29
SKIV2L-215ENST00000494058 KRT24Q2M2I5 525 aa16.87■□□□□ 0.29
SKIV2L-215ENST00000494058 ANO8Q9HCE9 1232 aaPredicted RBP16.87■□□□□ 0.29
SKIV2L-215ENST00000494058 ZNF330Q9Y3S2 320 aaPredicted RBP16.87■□□□□ 0.29
SKIV2L-215ENST00000494058 PHF14O94880 888 aa16.86■□□□□ 0.29
SKIV2L-215ENST00000494058 MYL6BP14649 208 aa16.86■□□□□ 0.29
SKIV2L-215ENST00000494058 EIF5P55010 431 aaKnown RBP16.86■□□□□ 0.29
SKIV2L-215ENST00000494058 KIF6Q6ZMV9 814 aa16.86■□□□□ 0.29
SKIV2L-215ENST00000494058 ARXQ96QS3 562 aa16.86■□□□□ 0.29
SKIV2L-215ENST00000494058 RGL2O15211 777 aa16.85■□□□□ 0.29
SKIV2L-215ENST00000494058 TSPYL6Q8N831 410 aa16.85■□□□□ 0.29
SKIV2L-215ENST00000494058 NECTIN2Q92692 538 aa16.85■□□□□ 0.29
SKIV2L-215ENST00000494058 ARHGEF1Q92888 912 aaKnown RBP16.85■□□□□ 0.29
SKIV2L-215ENST00000494058 ZNF652Q9Y2D9 606 aa16.85■□□□□ 0.29
SKIV2L-215ENST00000494058 COL15A1P39059 1388 aa16.85■□□□□ 0.29
SKIV2L-215ENST00000494058 DDX58O95786 925 aaKnown RBP16.84■□□□□ 0.29
SKIV2L-215ENST00000494058 ALDH1L2Q3SY69 923 aa16.84■□□□□ 0.29
SKIV2L-215ENST00000494058 CHPF2Q9P2E5 772 aa16.84■□□□□ 0.29
SKIV2L-215ENST00000494058 PNPLA7Q6ZV29 1317 aa16.84■□□□□ 0.29
SKIV2L-215ENST00000494058 QSER1Q2KHR3 1735 aa16.84■□□□□ 0.29
SKIV2L-215ENST00000494058 NBPF26B4DH59 902 aa16.83■□□□□ 0.28
SKIV2L-215ENST00000494058 NBPF10Q6P3W6 841 aaKnown RBP16.83■□□□□ 0.28
SKIV2L-215ENST00000494058 DZIP3Q86Y13 1208 aaKnown RBP16.83■□□□□ 0.28
SKIV2L-215ENST00000494058 NLGN1Q8N2Q7 840 aa16.83■□□□□ 0.28
SKIV2L-215ENST00000494058 NBPF15Q8N660 670 aa16.83■□□□□ 0.28
SKIV2L-215ENST00000494058 NARFQ9UHQ1 456 aa16.83■□□□□ 0.28
SKIV2L-215ENST00000494058 ERVV-1B6SEH8 477 aa16.82■□□□□ 0.28
SKIV2L-215ENST00000494058 SLC4A2P04920 1241 aa16.82■□□□□ 0.28
SKIV2L-215ENST00000494058 CLEC4GQ6UXB4 293 aa16.82■□□□□ 0.28
SKIV2L-215ENST00000494058 COL23A1Q86Y22 540 aaPredicted RBP16.82■□□□□ 0.28
SKIV2L-215ENST00000494058 PDIA6Q15084 440 aa16.81■□□□□ 0.28
SKIV2L-215ENST00000494058 MTFR1LQ9H019 292 aa16.81■□□□□ 0.28
SKIV2L-215ENST00000494058 UBR3Q6ZT12 1888 aa16.8■□□□□ 0.28
SKIV2L-215ENST00000494058 USP42Q9H9J4 1324 aaKnown RBP16.8■□□□□ 0.28
SKIV2L-215ENST00000494058 PSDA5PKW4 1024 aaPredicted RBP16.8■□□□□ 0.28
SKIV2L-215ENST00000494058 COPS6Q7L5N1 327 aa16.8■□□□□ 0.28
SKIV2L-215ENST00000494058 POLD1P28340 1107 aa16.79■□□□□ 0.28
SKIV2L-215ENST00000494058 PIP4K2AP48426 406 aaPredicted RBP16.79■□□□□ 0.28
SKIV2L-215ENST00000494058 AIMP1Q12904 312 aaKnown RBP16.79■□□□□ 0.28
SKIV2L-215ENST00000494058 HSP90AB3PQ58FF7 597 aa16.79■□□□□ 0.28
SKIV2L-215ENST00000494058 XAGE3Q8WTP9 111 aa16.79■□□□□ 0.28
SKIV2L-215ENST00000494058 TBC1D2BQ9UPU7 963 aa16.79■□□□□ 0.28
SKIV2L-215ENST00000494058 MYH14Q7Z406 1995 aaKnown RBP16.78■□□□□ 0.28
SKIV2L-215ENST00000494058 MAP3K15Q6ZN16 1313 aa16.78■□□□□ 0.28
SKIV2L-215ENST00000494058 ANKRD13DQ6ZTN6 518 aa16.78■□□□□ 0.28
SKIV2L-215ENST00000494058 SMC4Q9NTJ3 1288 aa16.78■□□□□ 0.28
SKIV2L-215ENST00000494058 USPL1Q5W0Q7 1092 aa16.77■□□□□ 0.28
SKIV2L-215ENST00000494058 RIC3Q7Z5B4 369 aa16.77■□□□□ 0.28
SKIV2L-215ENST00000494058 PLBD2Q8NHP8 589 aa16.77■□□□□ 0.28
SKIV2L-215ENST00000494058 SPON1Q9HCB6 807 aa16.77■□□□□ 0.28
SKIV2L-215ENST00000494058 PTPRCP08575 1304 aa16.76■□□□□ 0.27
SKIV2L-215ENST00000494058 KIF16BQ96L93 1317 aa16.76■□□□□ 0.27
SKIV2L-215ENST00000494058 IPO8O15397 1037 aaKnown RBP16.76■□□□□ 0.27
SKIV2L-215ENST00000494058 ANXA1P04083 346 aa16.76■□□□□ 0.27
SKIV2L-215ENST00000494058 GYS1P13807 737 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms