RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 WASF2Q9Y6W5 498 aa10.06□□□□□ -0.8
SMC2-205ENST00000493955 ALKBH2Q6NS38 261 aa10.05□□□□□ -0.8
SMC2-205ENST00000493955 POTEAQ6S8J7 498 aa10.05□□□□□ -0.8
SMC2-205ENST00000493955 QTRT2Q9H974 415 aaKnown RBP10.05□□□□□ -0.8
SMC2-205ENST00000493955 STIM2Q9P246 746 aa10.05□□□□□ -0.8
SMC2-205ENST00000493955 TNFRSF10BO14763 440 aa10.04□□□□□ -0.8
SMC2-205ENST00000493955 ZNF697Q5TEC3 545 aa10.04□□□□□ -0.8
SMC2-205ENST00000493955 KDF1Q8NAX2 398 aaPredicted RBP10.04□□□□□ -0.8
SMC2-205ENST00000493955 MYO19Q96H55 970 aa10.04□□□□□ -0.8
SMC2-205ENST00000493955 BRPF3Q9ULD4 1205 aa10.04□□□□□ -0.8
SMC2-205ENST00000493955 EIF1AXP47813 144 aaKnown RBP10.03□□□□□ -0.8
SMC2-205ENST00000493955 HIRAP54198 1017 aaPredicted RBP10.03□□□□□ -0.8
SMC2-205ENST00000493955 CBLBQ13191 982 aa10.03□□□□□ -0.8
SMC2-205ENST00000493955 Q6ZVU0 165 aa10.03□□□□□ -0.8
SMC2-205ENST00000493955 TMC7Q7Z402 723 aa10.03□□□□□ -0.8
SMC2-205ENST00000493955 SERTM1A2A2V5 107 aa10.02□□□□□ -0.81
SMC2-205ENST00000493955 EML1O00423 815 aa10.02□□□□□ -0.81
SMC2-205ENST00000493955 TEAD4Q15561 434 aa10.02□□□□□ -0.81
SMC2-205ENST00000493955 EAPPQ56P03 285 aaPredicted RBP10.02□□□□□ -0.81
SMC2-205ENST00000493955 ZNF598Q86UK7 904 aaKnown RBP10.02□□□□□ -0.81
SMC2-205ENST00000493955 ABTB2Q8N961 1025 aa10.02□□□□□ -0.81
SMC2-205ENST00000493955 ITPKCQ96DU7 683 aa10.02□□□□□ -0.81
SMC2-205ENST00000493955 CITED4Q96RK1 184 aa10.02□□□□□ -0.81
SMC2-205ENST00000493955 PTGIRP43119 386 aa10.01□□□□□ -0.81
SMC2-205ENST00000493955 FOXC1Q12948 553 aa10.01□□□□□ -0.81
SMC2-205ENST00000493955 AAMPQ13685 434 aa10.01□□□□□ -0.81
SMC2-205ENST00000493955 TRIM67Q6ZTA4 783 aa10.01□□□□□ -0.81
SMC2-205ENST00000493955 FHDC1Q9C0D6 1143 aaPredicted RBP10.01□□□□□ -0.81
SMC2-205ENST00000493955 BCL11AQ9H165 835 aa10.01□□□□□ -0.81
SMC2-205ENST00000493955 LRFN2Q9ULH4 789 aa10.01□□□□□ -0.81
SMC2-205ENST00000493955 FZD6O60353 706 aa10□□□□□ -0.81
SMC2-205ENST00000493955 ZIC2O95409 532 aaPredicted RBP10□□□□□ -0.81
SMC2-205ENST00000493955 VAMP1P23763 118 aa10□□□□□ -0.81
SMC2-205ENST00000493955 TAGLNQ01995 201 aaKnown RBP10□□□□□ -0.81
SMC2-205ENST00000493955 CENPCQ03188 943 aa10□□□□□ -0.81
SMC2-205ENST00000493955 SNIP1Q8TAD8 396 aaKnown RBP10□□□□□ -0.81
SMC2-205ENST00000493955 NGLY1Q96IV0 654 aa10□□□□□ -0.81
SMC2-205ENST00000493955 NLRP3Q96P20 1036 aa10□□□□□ -0.81
SMC2-205ENST00000493955 ZNF232Q9UNY5 417 aa10□□□□□ -0.81
SMC2-205ENST00000493955 MEN1O00255 615 aa9.99□□□□□ -0.81
SMC2-205ENST00000493955 TREHO43280 583 aa9.99□□□□□ -0.81
SMC2-205ENST00000493955 P4HBP07237 508 aaKnown RBP9.99□□□□□ -0.81
SMC2-205ENST00000493955 NOS2P35228 1153 aa9.99□□□□□ -0.81
SMC2-205ENST00000493955 PKDCCQ504Y2 493 aa9.99□□□□□ -0.81
SMC2-205ENST00000493955 ZNF295-AS1Q8N0V1 137 aa9.99□□□□□ -0.81
SMC2-205ENST00000493955 ZDHHC1Q8WTX9 485 aa9.99□□□□□ -0.81
SMC2-205ENST00000493955 KLF16Q9BXK1 252 aaPredicted RBP9.99□□□□□ -0.81
SMC2-205ENST00000493955 CCDC87Q9NVE4 849 aa9.99□□□□□ -0.81
SMC2-205ENST00000493955 CABP1Q9NZU7 370 aa9.99□□□□□ -0.81
SMC2-205ENST00000493955 PKD2L1Q9P0L9 805 aa9.99□□□□□ -0.81
SMC2-205ENST00000493955 BRD2P25440 801 aaKnown RBP9.99□□□□□ -0.81
SMC2-205ENST00000493955 SH3PXD2AQ5TCZ1 1133 aa9.99□□□□□ -0.81
SMC2-205ENST00000493955 TMC1Q8TDI8 760 aa9.99□□□□□ -0.81
SMC2-205ENST00000493955 DMRTB1Q96MA1 342 aa9.99□□□□□ -0.81
SMC2-205ENST00000493955 AGBL1Q96MI9 1066 aa9.99□□□□□ -0.81
SMC2-205ENST00000493955 POTECB2RU33 542 aa9.98□□□□□ -0.81
SMC2-205ENST00000493955 WDR4P57081 412 aaKnown RBP9.98□□□□□ -0.81
SMC2-205ENST00000493955 FMR1Q06787 632 aaKnown RBP eCLIP9.98□□□□□ -0.81
SMC2-205ENST00000493955 RTN1Q16799 776 aa9.98□□□□□ -0.81
SMC2-205ENST00000493955 PPARGC1BQ86YN6 1023 aaKnown RBP9.98□□□□□ -0.81
SMC2-205ENST00000493955 ALDH16A1Q8IZ83 802 aa9.98□□□□□ -0.81
SMC2-205ENST00000493955 L3MBTL2Q969R5 705 aa9.98□□□□□ -0.81
SMC2-205ENST00000493955 ZFAND3Q9H8U3 227 aa9.98□□□□□ -0.81
SMC2-205ENST00000493955 TCF3P15923 654 aa9.97□□□□□ -0.81
SMC2-205ENST00000493955 RELBQ01201 579 aa9.97□□□□□ -0.81
SMC2-205ENST00000493955 ZSCAN10Q96SZ4 725 aaPredicted RBP9.97□□□□□ -0.81
SMC2-205ENST00000493955 TIMP2P16035 220 aa9.96□□□□□ -0.82
SMC2-205ENST00000493955 GTF2E1P29083 439 aaPredicted RBP9.96□□□□□ -0.82
SMC2-205ENST00000493955 PDE3BQ13370 1112 aa9.96□□□□□ -0.82
SMC2-205ENST00000493955 FAM129BQ96TA1 746 aa9.96□□□□□ -0.82
SMC2-205ENST00000493955 NIFKQ9BYG3 293 aaKnown RBP9.96□□□□□ -0.82
SMC2-205ENST00000493955 HCN4Q9Y3Q4 1203 aa9.96□□□□□ -0.82
SMC2-205ENST00000493955 TTC24A2A3L6 582 aaPredicted RBP9.95□□□□□ -0.82
SMC2-205ENST00000493955 ZBTB39O15060 712 aa9.95□□□□□ -0.82
SMC2-205ENST00000493955 DGAT1O75907 488 aa9.95□□□□□ -0.82
SMC2-205ENST00000493955 DGKZQ13574 1117 aa9.95□□□□□ -0.82
SMC2-205ENST00000493955 DSC3Q14574 896 aa9.95□□□□□ -0.82
SMC2-205ENST00000493955 C11orf91Q3C1V1 193 aa9.95□□□□□ -0.82
SMC2-205ENST00000493955 FAM26DQ5JW98 314 aa9.95□□□□□ -0.82
SMC2-205ENST00000493955 RHBDD1Q8TEB9 315 aa9.95□□□□□ -0.82
SMC2-205ENST00000493955 PHACTR1Q9C0D0 580 aa9.95□□□□□ -0.82
SMC2-205ENST00000493955 PARP3Q9Y6F1 533 aa9.95□□□□□ -0.82
SMC2-205ENST00000493955 J3QL48 77 aa9.94□□□□□ -0.82
SMC2-205ENST00000493955 TMEM214Q6NUQ4 689 aaKnown RBP9.94□□□□□ -0.82
SMC2-205ENST00000493955 ATCAYQ86WG3 371 aa9.94□□□□□ -0.82
SMC2-205ENST00000493955 ZNF395Q9H8N7 513 aaPredicted RBP9.94□□□□□ -0.82
SMC2-205ENST00000493955 IGSF3O75054 1194 aa9.93□□□□□ -0.82
SMC2-205ENST00000493955 IGHA2P01877 340 aa9.93□□□□□ -0.82
SMC2-205ENST00000493955 FGD1P98174 961 aa9.93□□□□□ -0.82
SMC2-205ENST00000493955 EHHADHQ08426 723 aa9.93□□□□□ -0.82
SMC2-205ENST00000493955 ETFBKMTQ8IXQ9 262 aa9.93□□□□□ -0.82
SMC2-205ENST00000493955 CYP4X1Q8N118 509 aa9.93□□□□□ -0.82
SMC2-205ENST00000493955 ALKBH8Q96BT7 664 aaKnown RBP9.93□□□□□ -0.82
SMC2-205ENST00000493955 GPR182O15218 404 aa9.92□□□□□ -0.82
SMC2-205ENST00000493955 RECKO95980 971 aa9.92□□□□□ -0.82
SMC2-205ENST00000493955 GPC1P35052 558 aa9.92□□□□□ -0.82
SMC2-205ENST00000493955 MAPK8P45983 427 aa9.92□□□□□ -0.82
SMC2-205ENST00000493955 PLCB3Q01970 1234 aa9.92□□□□□ -0.82
SMC2-205ENST00000493955 C1orf53Q5VUE5 145 aa9.92□□□□□ -0.82
SMC2-205ENST00000493955 MEIOBQ8N635 442 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms