RNA–Protein interactions for RNA: ENST00000493814.1

C1orf43-209, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 2

Gene C1orf43, Length 441 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-209ENST00000493814 DLEC1Q9Y238 1755 aa12.11□□□□□ -0.47
C1orf43-209ENST00000493814 SRP68Q9UHB9 627 aaKnown RBP12.11□□□□□ -0.47
C1orf43-209ENST00000493814 PARP3Q9Y6F1 533 aa12.11□□□□□ -0.47
C1orf43-209ENST00000493814 C10orf71Q711Q0 1435 aa12.11□□□□□ -0.47
C1orf43-209ENST00000493814 BTBD11A6QL63 1104 aa12.1□□□□□ -0.47
C1orf43-209ENST00000493814 HTATSF1O43719 755 aaKnown RBP12.1□□□□□ -0.47
C1orf43-209ENST00000493814 GRIN3BO60391 1043 aa12.1□□□□□ -0.47
C1orf43-209ENST00000493814 STARD3NLO95772 234 aa12.1□□□□□ -0.47
C1orf43-209ENST00000493814 YBX3P16989 372 aaKnown RBP eCLIP12.1□□□□□ -0.471e-8■□□□□ 10.4
C1orf43-209ENST00000493814 MCM10Q7L590 875 aa12.1□□□□□ -0.47
C1orf43-209ENST00000493814 ZNF496Q96IT1 587 aaPredicted RBP12.1□□□□□ -0.47
C1orf43-209ENST00000493814 FMNL2Q96PY5 1086 aa12.1□□□□□ -0.47
C1orf43-209ENST00000493814 TEX13AQ9BXU3 409 aaPredicted RBP12.1□□□□□ -0.47
C1orf43-209ENST00000493814 PNNQ9H307 717 aaKnown RBP12.1□□□□□ -0.47
C1orf43-209ENST00000493814 ZBTB1Q9Y2K1 713 aa12.1□□□□□ -0.47
C1orf43-209ENST00000493814 PXDNLA1KZ92 1463 aa12.09□□□□□ -0.47
C1orf43-209ENST00000493814 ZPR1O75312 459 aa12.09□□□□□ -0.47
C1orf43-209ENST00000493814 MYBBP1AQ9BQG0 1328 aaKnown RBP12.09□□□□□ -0.47
C1orf43-209ENST00000493814 MAPK8IP3Q9UPT6 1336 aa12.09□□□□□ -0.47
C1orf43-209ENST00000493814 CANXP27824 592 aaKnown RBP12.08□□□□□ -0.48
C1orf43-209ENST00000493814 DCTN1Q14203 1278 aa12.08□□□□□ -0.48
C1orf43-209ENST00000493814 FKBP8Q14318 412 aa12.08□□□□□ -0.48
C1orf43-209ENST00000493814 USPL1Q5W0Q7 1092 aa12.08□□□□□ -0.48
C1orf43-209ENST00000493814 PLEKHF1Q96S99 279 aa12.08□□□□□ -0.48
C1orf43-209ENST00000493814 NARFQ9UHQ1 456 aa12.08□□□□□ -0.48
C1orf43-209ENST00000493814 CACNA1SQ13698 1873 aa12.08□□□□□ -0.48
C1orf43-209ENST00000493814 KCNQ3O43525 872 aa12.07□□□□□ -0.48
C1orf43-209ENST00000493814 ZEB1P37275 1124 aaPredicted RBP12.07□□□□□ -0.48
C1orf43-209ENST00000493814 ANKRD31Q8N7Z5 1873 aa12.07□□□□□ -0.48
C1orf43-209ENST00000493814 A0A087WZG4 1122 aa12.06□□□□□ -0.48
C1orf43-209ENST00000493814 TGFB2P61812 414 aa12.06□□□□□ -0.48
C1orf43-209ENST00000493814 NFE2L2Q16236 605 aa12.06□□□□□ -0.48
C1orf43-209ENST00000493814 WWC3Q9ULE0 1092 aa12.06□□□□□ -0.48
C1orf43-209ENST00000493814 NUP98P52948 1817 aa12.06□□□□□ -0.48
C1orf43-209ENST00000493814 TM4SF1P30408 202 aa12.05□□□□□ -0.48
C1orf43-209ENST00000493814 EIF5P55010 431 aaKnown RBP12.05□□□□□ -0.48
C1orf43-209ENST00000493814 DDR1Q08345 913 aa12.05□□□□□ -0.48
C1orf43-209ENST00000493814 TAF7Q15545 349 aaPredicted RBP12.05□□□□□ -0.48
C1orf43-209ENST00000493814 ZNF330Q9Y3S2 320 aaPredicted RBP12.05□□□□□ -0.48
C1orf43-209ENST00000493814 CCDC88AQ3V6T2 1871 aa12.04□□□□□ -0.48
C1orf43-209ENST00000493814 POLRMTO00411 1230 aaKnown RBP12.04□□□□□ -0.48
C1orf43-209ENST00000493814 IL6STP40189 918 aaPredicted RBP12.04□□□□□ -0.48
C1orf43-209ENST00000493814 NPM2Q86SE8 214 aaKnown RBP12.04□□□□□ -0.48
C1orf43-209ENST00000493814 ZNF784Q8NCA9 323 aaPredicted RBP12.04□□□□□ -0.48
C1orf43-209ENST00000493814 SBF1O95248 1867 aa12.04□□□□□ -0.48
C1orf43-209ENST00000493814 COL11A2P13942 1736 aaPredicted RBP12.03□□□□□ -0.48
C1orf43-209ENST00000493814 A0A0G2JLW4 131 aa12.03□□□□□ -0.48
C1orf43-209ENST00000493814 A1BGP04217 495 aa12.03□□□□□ -0.48
C1orf43-209ENST00000493814 SNRPA1P09661 255 aaKnown RBP12.03□□□□□ -0.48
C1orf43-209ENST00000493814 PNISRQ8TF01 805 aaKnown RBP12.03□□□□□ -0.48
C1orf43-209ENST00000493814 BCL2L12Q9HB09 334 aa12.03□□□□□ -0.48
C1orf43-209ENST00000493814 USP16Q9Y5T5 823 aa12.03□□□□□ -0.48
C1orf43-209ENST00000493814 ARFGEF2Q9Y6D5 1785 aa12.02□□□□□ -0.48
C1orf43-209ENST00000493814 PRAMEF22A3QJZ6 481 aa12.02□□□□□ -0.49
C1orf43-209ENST00000493814 DPEP1P16444 411 aa12.02□□□□□ -0.49
C1orf43-209ENST00000493814 NFIXQ14938 502 aa12.02□□□□□ -0.49
C1orf43-209ENST00000493814 WDR43Q15061 677 aaKnown RBP eCLIP12.02□□□□□ -0.49
C1orf43-209ENST00000493814 PRKRIP1Q9H875 184 aaPredicted RBP12.02□□□□□ -0.49
C1orf43-209ENST00000493814 TBC1D2BQ9UPU7 963 aa12.02□□□□□ -0.49
C1orf43-209ENST00000493814 BCS1LQ9Y276 419 aa12.02□□□□□ -0.49
C1orf43-209ENST00000493814 SERPINB2P05120 415 aa12.01□□□□□ -0.49
C1orf43-209ENST00000493814 MIS18AQ9NYP9 233 aa12.01□□□□□ -0.49
C1orf43-209ENST00000493814 PIP4K2AP48426 406 aaPredicted RBP12□□□□□ -0.49
C1orf43-209ENST00000493814 RIPK4P57078 832 aa12□□□□□ -0.49
C1orf43-209ENST00000493814 BICDL1Q6ZP65 573 aa12□□□□□ -0.49
C1orf43-209ENST00000493814 DZIP3Q86Y13 1208 aaKnown RBP12□□□□□ -0.49
C1orf43-209ENST00000493814 THUMPD2Q9BTF0 503 aaKnown RBP12□□□□□ -0.49
C1orf43-209ENST00000493814 PIM2Q9P1W9 311 aa12□□□□□ -0.49
C1orf43-209ENST00000493814 ANKRD36CQ5JPF3 1778 aa12□□□□□ -0.49
C1orf43-209ENST00000493814 CAMTA2O94983 1202 aa11.99□□□□□ -0.49
C1orf43-209ENST00000493814 KCNA3P22001 575 aa11.99□□□□□ -0.49
C1orf43-209ENST00000493814 TMPOP42166 694 aaKnown RBP11.99□□□□□ -0.49
C1orf43-209ENST00000493814 LMOD3Q0VAK6 560 aa11.99□□□□□ -0.49
C1orf43-209ENST00000493814 TBC1D9BQ66K14 1250 aa11.99□□□□□ -0.49
C1orf43-209ENST00000493814 CCDC146Q8IYE0 955 aa11.99□□□□□ -0.49
C1orf43-209ENST00000493814 CARMIL3Q8ND23 1372 aa11.99□□□□□ -0.49
C1orf43-209ENST00000493814 ATP10DQ9P241 1426 aa11.98□□□□□ -0.49
C1orf43-209ENST00000493814 ADCY9O60503 1353 aa11.98□□□□□ -0.49
C1orf43-209ENST00000493814 CHRNA5P30532 468 aa11.98□□□□□ -0.49
C1orf43-209ENST00000493814 EIF4A1P60842 406 aaKnown RBP11.98□□□□□ -0.49
C1orf43-209ENST00000493814 RUNDC1Q96C34 613 aa11.98□□□□□ -0.49
C1orf43-209ENST00000493814 DICER1Q9UPY3 1922 aaKnown RBP11.98□□□□□ -0.49
C1orf43-209ENST00000493814 TIAM2Q8IVF5 1701 aa11.97□□□□□ -0.49
C1orf43-209ENST00000493814 NBPF26B4DH59 902 aa11.97□□□□□ -0.49
C1orf43-209ENST00000493814 GIGYF1O75420 1035 aaPredicted RBP11.97□□□□□ -0.49
C1orf43-209ENST00000493814 NEUROD2Q15784 382 aa11.97□□□□□ -0.49
C1orf43-209ENST00000493814 DALRD3Q5D0E6 543 aaKnown RBP11.97□□□□□ -0.49
C1orf43-209ENST00000493814 NBPF10Q6P3W6 841 aaKnown RBP11.97□□□□□ -0.49
C1orf43-209ENST00000493814 NBPF15Q8N660 670 aa11.97□□□□□ -0.49
C1orf43-209ENST00000493814 TSPYL4Q9UJ04 414 aa11.97□□□□□ -0.49
C1orf43-209ENST00000493814 ADAMTS8Q9UP79 889 aa11.97□□□□□ -0.49
C1orf43-209ENST00000493814 RRP7AQ9Y3A4 280 aaKnown RBP11.97□□□□□ -0.49
C1orf43-209ENST00000493814 FER1L6Q2WGJ9 1857 aa11.97□□□□□ -0.49
C1orf43-209ENST00000493814 ARHGAP27Q6ZUM4 889 aa11.96□□□□□ -0.49
C1orf43-209ENST00000493814 SETDB2Q96T68 719 aa11.96□□□□□ -0.49
C1orf43-209ENST00000493814 ZNF652Q9Y2D9 606 aa11.96□□□□□ -0.49
C1orf43-209ENST00000493814 NPHP1O15259 732 aa11.95□□□□□ -0.5
C1orf43-209ENST00000493814 PRR5LQ6MZQ0 368 aa11.95□□□□□ -0.5
C1orf43-209ENST00000493814 CLEC4GQ6UXB4 293 aa11.95□□□□□ -0.5
C1orf43-209ENST00000493814 BABAM1Q9NWV8 329 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms