RNA–Protein interactions for RNA: ENST00000493726.1

LRCH3-218, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 733 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-218ENST00000493726 HMX1Q9NP08 348 aaPredicted RBP11.68□□□□□ -0.54
LRCH3-218ENST00000493726 FKBPLQ9UIM3 349 aa11.68□□□□□ -0.54
LRCH3-218ENST00000493726 TET3O43151 1660 aa11.68□□□□□ -0.54
LRCH3-218ENST00000493726 ZIC2O95409 532 aaPredicted RBP11.67□□□□□ -0.54
LRCH3-218ENST00000493726 FSHRP23945 695 aa11.67□□□□□ -0.54
LRCH3-218ENST00000493726 RFC5P40937 340 aa11.67□□□□□ -0.54
LRCH3-218ENST00000493726 TPRNQ4KMQ1 711 aa11.67□□□□□ -0.54
LRCH3-218ENST00000493726 LCE2AQ5TA79 106 aaPredicted RBP11.67□□□□□ -0.54
LRCH3-218ENST00000493726 THEMISQ8N1K5 641 aaPredicted RBP11.67□□□□□ -0.54
LRCH3-218ENST00000493726 ITPKCQ96DU7 683 aa11.67□□□□□ -0.54
LRCH3-218ENST00000493726 ZFP42Q96MM3 310 aa11.67□□□□□ -0.54
LRCH3-218ENST00000493726 IQGAP3Q86VI3 1631 aa11.67□□□□□ -0.54
LRCH3-218ENST00000493726 KANK1Q14678 1352 aa11.67□□□□□ -0.54
LRCH3-218ENST00000493726 GCC2Q8IWJ2 1684 aa11.66□□□□□ -0.54
LRCH3-218ENST00000493726 USP17L8P0C7I0 530 aa11.66□□□□□ -0.54
LRCH3-218ENST00000493726 BRPF1P55201 1214 aaPredicted RBP11.66□□□□□ -0.54
LRCH3-218ENST00000493726 VASH1Q7L8A9 365 aaPredicted RBP11.66□□□□□ -0.54
LRCH3-218ENST00000493726 CHIC2Q9UKJ5 165 aa11.66□□□□□ -0.54
LRCH3-218ENST00000493726 PIK3C2BO00750 1634 aa11.65□□□□□ -0.54
LRCH3-218ENST00000493726 NR5A1Q13285 461 aa11.65□□□□□ -0.54
LRCH3-218ENST00000493726 ERFEQ4G0M1 354 aa11.65□□□□□ -0.54
LRCH3-218ENST00000493726 MRPL14Q6P1L8 145 aaKnown RBP11.65□□□□□ -0.54
LRCH3-218ENST00000493726 GPKOWQ92917 476 aaPredicted RBP eCLIP11.65□□□□□ -0.54
LRCH3-218ENST00000493726 PURBQ96QR8 312 aaKnown RBP11.65□□□□□ -0.54
LRCH3-218ENST00000493726 ARHGAP9Q9BRR9 750 aa11.65□□□□□ -0.54
LRCH3-218ENST00000493726 WFS1O76024 890 aa11.64□□□□□ -0.55
LRCH3-218ENST00000493726 NFX1Q12986 1120 aaKnown RBP11.64□□□□□ -0.55
LRCH3-218ENST00000493726 FAM50AQ14320 339 aaKnown RBP11.64□□□□□ -0.55
LRCH3-218ENST00000493726 PCMTD1Q96MG8 357 aaPredicted RBP11.64□□□□□ -0.55
LRCH3-218ENST00000493726 NPHP4O75161 1426 aaPredicted RBP11.63□□□□□ -0.55
LRCH3-218ENST00000493726 IQGAP1P46940 1657 aa11.63□□□□□ -0.55
LRCH3-218ENST00000493726 PDXDC2PQ6P474 469 aa11.63□□□□□ -0.55
LRCH3-218ENST00000493726 TRMT44Q8IYL2 757 aaKnown RBP11.63□□□□□ -0.55
LRCH3-218ENST00000493726 CPS1P31327 1500 aa11.63□□□□□ -0.55
LRCH3-218ENST00000493726 ADGRB3O60242 1522 aa11.62□□□□□ -0.55
LRCH3-218ENST00000493726 ANKLE2Q86XL3 938 aa11.62□□□□□ -0.55
LRCH3-218ENST00000493726 SCAF11Q99590 1463 aaKnown RBP11.62□□□□□ -0.55
LRCH3-218ENST00000493726 E9PCH4 1651 aa11.62□□□□□ -0.55
LRCH3-218ENST00000493726 ZNF335Q9H4Z2 1342 aaPredicted RBP11.61□□□□□ -0.55
LRCH3-218ENST00000493726 OCSTAMPQ9BR26 566 aa11.61□□□□□ -0.55
LRCH3-218ENST00000493726 MAP4K5Q9Y4K4 846 aa11.61□□□□□ -0.55
LRCH3-218ENST00000493726 TMEM2Q9UHN6 1383 aa11.61□□□□□ -0.55
LRCH3-218ENST00000493726 SOBPA7XYQ1 873 aa11.6□□□□□ -0.55
LRCH3-218ENST00000493726 TERTO14746 1132 aaKnown RBP11.6□□□□□ -0.55
LRCH3-218ENST00000493726 C6orf118Q5T5N4 469 aa11.6□□□□□ -0.55
LRCH3-218ENST00000493726 LCE2CQ5TA81 110 aa11.6□□□□□ -0.55
LRCH3-218ENST00000493726 SLC52A1Q9NWF4 448 aa11.6□□□□□ -0.55
LRCH3-218ENST00000493726 CFAP65Q6ZU64 1925 aaKnown RBP11.6□□□□□ -0.55
LRCH3-218ENST00000493726 NAIPQ13075 1403 aa11.6□□□□□ -0.55
LRCH3-218ENST00000493726 IDI1Q13907 227 aa11.59□□□□□ -0.55
LRCH3-218ENST00000493726 ZBTB33Q86T24 672 aa11.59□□□□□ -0.55
LRCH3-218ENST00000493726 GOPCQ9HD26 462 aa11.59□□□□□ -0.55
LRCH3-218ENST00000493726 TMEM131LA2VDJ0 1609 aa11.59□□□□□ -0.55
LRCH3-218ENST00000493726 ZFYVE9O95405 1425 aa11.59□□□□□ -0.55
LRCH3-218ENST00000493726 STRCP1A6NGW2 1772 aa11.59□□□□□ -0.55
LRCH3-218ENST00000493726 LTKP29376 864 aa11.58□□□□□ -0.56
LRCH3-218ENST00000493726 SCARF1Q14162 830 aa11.58□□□□□ -0.56
LRCH3-218ENST00000493726 HFM1A2PYH4 1435 aa11.58□□□□□ -0.56
LRCH3-218ENST00000493726 ALKQ9UM73 1620 aa11.57□□□□□ -0.56
LRCH3-218ENST00000493726 VEGFBP49765 207 aa11.57□□□□□ -0.56
LRCH3-218ENST00000493726 CCDC116Q8IYX3 515 aa11.57□□□□□ -0.56
LRCH3-218ENST00000493726 SLC10A4Q96EP9 437 aa11.57□□□□□ -0.56
LRCH3-218ENST00000493726 UBAP1LF5GYI3 381 aa11.56□□□□□ -0.56
LRCH3-218ENST00000493726 PTK2Q05397 1052 aa11.56□□□□□ -0.56
LRCH3-218ENST00000493726 MED1Q15648 1581 aaPredicted RBP11.56□□□□□ -0.56
LRCH3-218ENST00000493726 ADAM32Q8TC27 787 aa11.56□□□□□ -0.56
LRCH3-218ENST00000493726 ZC3H4Q9UPT8 1303 aaKnown RBP11.56□□□□□ -0.56
LRCH3-218ENST00000493726 KCTD15Q96SI1 283 aaPredicted RBP11.55□□□□□ -0.56
LRCH3-218ENST00000493726 NWD1Q149M9 1564 aa11.54□□□□□ -0.56
LRCH3-218ENST00000493726 PPP1R26Q5T8A7 1209 aaPredicted RBP11.54□□□□□ -0.56
LRCH3-218ENST00000493726 MEIOBQ8N635 442 aa11.54□□□□□ -0.56
LRCH3-218ENST00000493726 TRIM34Q9BYJ4 488 aa11.54□□□□□ -0.56
LRCH3-218ENST00000493726 NXF1Q9UBU9 619 aaKnown RBP11.54□□□□□ -0.56
LRCH3-218ENST00000493726 LRRC7Q96NW7 1537 aa11.54□□□□□ -0.56
LRCH3-218ENST00000493726 NUP155O75694 1391 aa11.54□□□□□ -0.56
LRCH3-218ENST00000493726 BMP2P12643 396 aa11.53□□□□□ -0.56
LRCH3-218ENST00000493726 LINC00528Q8N1L1 170 aa11.53□□□□□ -0.56
LRCH3-218ENST00000493726 EMILIN1Q9Y6C2 1016 aa11.53□□□□□ -0.56
LRCH3-218ENST00000493726 MYO5BQ9ULV0 1848 aa11.52□□□□□ -0.57
LRCH3-218ENST00000493726 CBLBQ13191 982 aa11.52□□□□□ -0.57
LRCH3-218ENST00000493726 TMEM259Q4ZIN3 620 aa11.52□□□□□ -0.57
LRCH3-218ENST00000493726 SPHKAPQ2M3C7 1700 aa11.52□□□□□ -0.57
LRCH3-218ENST00000493726 XIRP1Q702N8 1843 aaKnown RBP11.51□□□□□ -0.57
LRCH3-218ENST00000493726 TRPM2O94759 1503 aa11.51□□□□□ -0.57
LRCH3-218ENST00000493726 HSPA1LP34931 641 aa11.51□□□□□ -0.57
LRCH3-218ENST00000493726 RAB15P59190 212 aa11.51□□□□□ -0.57
LRCH3-218ENST00000493726 TXNDC2Q86VQ3 553 aa11.51□□□□□ -0.57
LRCH3-218ENST00000493726 PPARGC1BQ86YN6 1023 aaKnown RBP11.51□□□□□ -0.57
LRCH3-218ENST00000493726 PLEKHG1Q9ULL1 1385 aa11.51□□□□□ -0.57
LRCH3-218ENST00000493726 INTS6LQ5JSJ4 861 aaKnown RBP11.5□□□□□ -0.57
LRCH3-218ENST00000493726 GPSM3Q9Y4H4 160 aa11.5□□□□□ -0.57
LRCH3-218ENST00000493726 EID1Q9Y6B2 187 aa11.5□□□□□ -0.57
LRCH3-218ENST00000493726 UPP2O95045 317 aa11.49□□□□□ -0.57
LRCH3-218ENST00000493726 PNMA1Q8ND90 353 aa11.49□□□□□ -0.57
LRCH3-218ENST00000493726 GJD4Q96KN9 370 aaPredicted RBP11.49□□□□□ -0.57
LRCH3-218ENST00000493726 NKTRP30414 1462 aaKnown RBP11.49□□□□□ -0.57
LRCH3-218ENST00000493726 DIP2AQ14689 1571 aa11.49□□□□□ -0.57
LRCH3-218ENST00000493726 CDV3Q9UKY7 258 aaKnown RBP11.48□□□□□ -0.57
LRCH3-218ENST00000493726 RIMS2Q9UQ26 1411 aa11.48□□□□□ -0.57
LRCH3-218ENST00000493726 CHD2O14647 1828 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms