RNA–Protein interactions for RNA: ENST00000493698.1

TFIP11-215, Transcript of tuftelin interacting protein 11, human

TSL 3

Gene TFIP11, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TFIP11-215	ENST00000493698	PTF1A	Q7RTS3	328 aa		13.74	□□□□□ -0.21
TFIP11-215	ENST00000493698	AK7	Q96M32	723 aa		13.74	□□□□□ -0.21
TFIP11-215	ENST00000493698	KCP	Q6ZWJ8	1503 aa		13.74	□□□□□ -0.21
TFIP11-215	ENST00000493698	IL16	Q14005	1332 aa		13.73	□□□□□ -0.21
TFIP11-215	ENST00000493698	CNTNAP4	Q9C0A0	1308 aa		13.73	□□□□□ -0.21
TFIP11-215	ENST00000493698	GNAI1	P63096	354 aa		13.73	□□□□□ -0.21
TFIP11-215	ENST00000493698	NPM2	Q86SE8	214 aa	Known RBP	13.73	□□□□□ -0.21
TFIP11-215	ENST00000493698	TSPYL4	Q9UJ04	414 aa		13.73	□□□□□ -0.21
TFIP11-215	ENST00000493698	TJP1	Q07157	1748 aa		13.73	□□□□□ -0.21
TFIP11-215	ENST00000493698	HEG1	Q9ULI3	1381 aa		13.72	□□□□□ -0.21
TFIP11-215	ENST00000493698	PTCD1	O75127	700 aa	Known RBP	13.72	□□□□□ -0.21
TFIP11-215	ENST00000493698	SLC15A2	Q16348	729 aa		13.72	□□□□□ -0.21
TFIP11-215	ENST00000493698	MIER1	Q8N108	512 aa		13.72	□□□□□ -0.21
TFIP11-215	ENST00000493698	IFT57	Q9NWB7	429 aa		13.72	□□□□□ -0.21
TFIP11-215	ENST00000493698	RRP7A	Q9Y3A4	280 aa	Known RBP	13.72	□□□□□ -0.21
TFIP11-215	ENST00000493698	SOS1	Q07889	1333 aa	Predicted RBP	13.71	□□□□□ -0.21
TFIP11-215	ENST00000493698	DCTN1	Q14203	1278 aa		13.71	□□□□□ -0.21
TFIP11-215	ENST00000493698	RC3H1	Q5TC82	1133 aa	Known RBP	13.71	□□□□□ -0.21
TFIP11-215	ENST00000493698	CFAP44	Q96MT7	982 aa		13.71	□□□□□ -0.21
TFIP11-215	ENST00000493698	SNRPA1	P09661	255 aa	Known RBP	13.7	□□□□□ -0.22
TFIP11-215	ENST00000493698	SSFA2	P28290	1259 aa		13.7	□□□□□ -0.22
TFIP11-215	ENST00000493698	MNX1	P50219	401 aa	Predicted RBP	13.7	□□□□□ -0.22
TFIP11-215	ENST00000493698	WDR63	Q8IWG1	891 aa		13.7	□□□□□ -0.22
TFIP11-215	ENST00000493698	TFCP2L1	Q9NZI6	479 aa		13.7	□□□□□ -0.22
TFIP11-215	ENST00000493698	TRIM35	Q9UPQ4	493 aa		13.7	□□□□□ -0.22
TFIP11-215	ENST00000493698	SLC39A6	Q13433	755 aa		13.69	□□□□□ -0.22
TFIP11-215	ENST00000493698	SLC16A10	Q8TF71	515 aa		13.69	□□□□□ -0.22
TFIP11-215	ENST00000493698	LRRC4B	Q9NT99	713 aa		13.69	□□□□□ -0.22
TFIP11-215	ENST00000493698	RTCB	Q9Y3I0	505 aa	Known RBP	13.69	□□□□□ -0.22
TFIP11-215	ENST00000493698	UBR3	Q6ZT12	1888 aa		13.69	□□□□□ -0.22
TFIP11-215	ENST00000493698	HOXB7	P09629	217 aa		13.68	□□□□□ -0.22
TFIP11-215	ENST00000493698	VASP	P50552	380 aa	Predicted RBP	13.68	□□□□□ -0.22
TFIP11-215	ENST00000493698	WWC1	Q8IX03	1113 aa		13.68	□□□□□ -0.22
TFIP11-215	ENST00000493698	ZNF496	Q96IT1	587 aa	Predicted RBP	13.68	□□□□□ -0.22
TFIP11-215	ENST00000493698	MYH16	Q9H6N6	1097 aa		13.68	□□□□□ -0.22
TFIP11-215	ENST00000493698	FARP1	Q9Y4F1	1045 aa	Predicted RBP	13.68	□□□□□ -0.22
TFIP11-215	ENST00000493698	TUBGCP6	Q96RT7	1819 aa		13.68	□□□□□ -0.22
TFIP11-215	ENST00000493698	ERBB4	Q15303	1308 aa		13.67	□□□□□ -0.22
TFIP11-215	ENST00000493698	CHL1	O00533	1208 aa		13.67	□□□□□ -0.22
TFIP11-215	ENST00000493698	THUMPD2	Q9BTF0	503 aa	Known RBP	13.67	□□□□□ -0.22
TFIP11-215	ENST00000493698	CCDC87	Q9NVE4	849 aa		13.67	□□□□□ -0.22
TFIP11-215	ENST00000493698	LAS1L	Q9Y4W2	734 aa	Known RBP	13.67	□□□□□ -0.22
TFIP11-215	ENST00000493698	CASZ1	Q86V15	1759 aa		13.66	□□□□□ -0.22
TFIP11-215	ENST00000493698		A0A087WZG4	1122 aa		13.66	□□□□□ -0.22
TFIP11-215	ENST00000493698	GNPAT	O15228	680 aa		13.66	□□□□□ -0.22
TFIP11-215	ENST00000493698	R3HDM1	Q15032	1099 aa	Known RBP	13.66	□□□□□ -0.22
TFIP11-215	ENST00000493698	CRKL	P46109	303 aa	Known RBP	13.65	□□□□□ -0.22
TFIP11-215	ENST00000493698	ITPK1	Q13572	414 aa		13.65	□□□□□ -0.22
TFIP11-215	ENST00000493698	LINC00116	Q8NCU8	138 aa		13.65	□□□□□ -0.22
TFIP11-215	ENST00000493698	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.65	□□□□□ -0.22
TFIP11-215	ENST00000493698	RPS6KA4	O75676	772 aa		13.64	□□□□□ -0.23
TFIP11-215	ENST00000493698	CYP19A1	P11511	503 aa	Predicted RBP	13.64	□□□□□ -0.23
TFIP11-215	ENST00000493698	EIF4A1	P60842	406 aa	Known RBP	13.64	□□□□□ -0.23
TFIP11-215	ENST00000493698	TRAPPC3L	Q5T215	181 aa		13.64	□□□□□ -0.23
TFIP11-215	ENST00000493698	DNAJC10	Q8IXB1	793 aa		13.64	□□□□□ -0.23
TFIP11-215	ENST00000493698	PLCD3	Q8N3E9	789 aa		13.64	□□□□□ -0.23
TFIP11-215	ENST00000493698	LRP5	O75197	1615 aa		13.64	□□□□□ -0.23
TFIP11-215	ENST00000493698	ZNF853	P0CG23	659 aa		13.63	□□□□□ -0.23
TFIP11-215	ENST00000493698	RFC4	P35249	363 aa		13.63	□□□□□ -0.23
TFIP11-215	ENST00000493698	IL6ST	P40189	918 aa	Predicted RBP	13.63	□□□□□ -0.23
TFIP11-215	ENST00000493698	GOLGA2	Q08379	1002 aa		13.63	□□□□□ -0.23
TFIP11-215	ENST00000493698	ZNF827	Q17R98	1081 aa		13.63	□□□□□ -0.23
TFIP11-215	ENST00000493698	MTFR1L	Q9H019	292 aa		13.63	□□□□□ -0.23
TFIP11-215	ENST00000493698	C4A	P0C0L4	1744 aa		13.62	□□□□□ -0.23
TFIP11-215	ENST00000493698	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.62	□□□□□ -0.23
TFIP11-215	ENST00000493698		E9PSI1	815 aa		13.62	□□□□□ -0.23
TFIP11-215	ENST00000493698	RGL2	O15211	777 aa		13.62	□□□□□ -0.23
TFIP11-215	ENST00000493698	GIGYF1	O75420	1035 aa	Predicted RBP	13.62	□□□□□ -0.23
TFIP11-215	ENST00000493698	SLC4A9	Q96Q91	983 aa		13.62	□□□□□ -0.23
TFIP11-215	ENST00000493698	MBIP	Q9NS73	344 aa		13.62	□□□□□ -0.23
TFIP11-215	ENST00000493698	PNPLA7	Q6ZV29	1317 aa		13.62	□□□□□ -0.23
TFIP11-215	ENST00000493698	CACNA1F	O60840	1977 aa		13.62	□□□□□ -0.23
TFIP11-215	ENST00000493698	MYH14	Q7Z406	1995 aa	Known RBP	13.62	□□□□□ -0.23
TFIP11-215	ENST00000493698	COL15A1	P39059	1388 aa		13.61	□□□□□ -0.23
TFIP11-215	ENST00000493698	PSD	A5PKW4	1024 aa	Predicted RBP	13.61	□□□□□ -0.23
TFIP11-215	ENST00000493698	POLD1	P28340	1107 aa		13.61	□□□□□ -0.23
TFIP11-215	ENST00000493698	KCNQ4	P56696	695 aa		13.61	□□□□□ -0.23
TFIP11-215	ENST00000493698	SP7	Q8TDD2	431 aa	Predicted RBP	13.61	□□□□□ -0.23
TFIP11-215	ENST00000493698	SPON1	Q9HCB6	807 aa		13.61	□□□□□ -0.23
TFIP11-215	ENST00000493698	MIS18A	Q9NYP9	233 aa		13.61	□□□□□ -0.23
TFIP11-215	ENST00000493698	ZPR1	O75312	459 aa		13.6	□□□□□ -0.23
TFIP11-215	ENST00000493698	PHF14	O94880	888 aa		13.6	□□□□□ -0.23
TFIP11-215	ENST00000493698	ZNF652	Q9Y2D9	606 aa		13.6	□□□□□ -0.23
TFIP11-215	ENST00000493698	SALL2	Q9Y467	1007 aa	Predicted RBP	13.6	□□□□□ -0.23
TFIP11-215	ENST00000493698	SCN7A	Q01118	1682 aa		13.59	□□□□□ -0.23
TFIP11-215	ENST00000493698	COL24A1	Q17RW2	1714 aa		13.59	□□□□□ -0.23
TFIP11-215	ENST00000493698	KCNQ3	O43525	872 aa		13.59	□□□□□ -0.23
TFIP11-215	ENST00000493698	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
TFIP11-215	ENST00000493698	HDGFL1	Q5TGJ6	251 aa		13.59	□□□□□ -0.23
TFIP11-215	ENST00000493698	NLGN1	Q8N2Q7	840 aa		13.59	□□□□□ -0.23
TFIP11-215	ENST00000493698	ZBTB1	Q9Y2K1	713 aa		13.59	□□□□□ -0.23
TFIP11-215	ENST00000493698	BCOR	Q6W2J9	1755 aa		13.58	□□□□□ -0.23
TFIP11-215	ENST00000493698	CANX	P27824	592 aa	Known RBP	13.58	□□□□□ -0.24
TFIP11-215	ENST00000493698	CCDC30	Q5VVM6	783 aa		13.58	□□□□□ -0.24
TFIP11-215	ENST00000493698	INTS5	Q6P9B9	1019 aa	Known RBP	13.58	□□□□□ -0.24
TFIP11-215	ENST00000493698	KIF6	Q6ZMV9	814 aa		13.58	□□□□□ -0.24
TFIP11-215	ENST00000493698	ZNF428	Q96B54	188 aa		13.58	□□□□□ -0.24
TFIP11-215	ENST00000493698	STK31	Q9BXU1	1019 aa		13.58	□□□□□ -0.24
TFIP11-215	ENST00000493698	DBF4	Q9UBU7	674 aa	Predicted RBP	13.58	□□□□□ -0.24
TFIP11-215	ENST00000493698	ZNF521	Q96K83	1311 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 20 ms