RNA–Protein interactions for RNA: ENST00000493672.1

SNRNP25-207, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 5

Gene SNRNP25, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-207ENST00000493672 CHD4Q14839 1912 aa16.04■□□□□ 0.16
SNRNP25-207ENST00000493672 A0A087WZG4 1122 aa16.04■□□□□ 0.16
SNRNP25-207ENST00000493672 NFE2L2Q16236 605 aa16.04■□□□□ 0.16
SNRNP25-207ENST00000493672 PNISRQ8TF01 805 aaKnown RBP16.04■□□□□ 0.16
SNRNP25-207ENST00000493672 ZBTB1Q9Y2K1 713 aa16.04■□□□□ 0.16
SNRNP25-207ENST00000493672 DLG5Q8TDM6 1919 aa16.04■□□□□ 0.16
SNRNP25-207ENST00000493672 TAF7Q15545 349 aaPredicted RBP16.03■□□□□ 0.16
SNRNP25-207ENST00000493672 SRP68Q9UHB9 627 aaKnown RBP16.03■□□□□ 0.16
SNRNP25-207ENST00000493672 NARFQ9UHQ1 456 aa16.03■□□□□ 0.16
SNRNP25-207ENST00000493672 CANXP27824 592 aaKnown RBP16.02■□□□□ 0.16
SNRNP25-207ENST00000493672 DCTN1Q14203 1278 aa16.02■□□□□ 0.16
SNRNP25-207ENST00000493672 FKBP8Q14318 412 aa16.02■□□□□ 0.16
SNRNP25-207ENST00000493672 USPL1Q5W0Q7 1092 aa16.02■□□□□ 0.16
SNRNP25-207ENST00000493672 PRKRIP1Q9H875 184 aaPredicted RBP16.02■□□□□ 0.16
SNRNP25-207ENST00000493672 KIF13BQ9NQT8 1826 aa16.02■□□□□ 0.16
SNRNP25-207ENST00000493672 KCNQ3O43525 872 aa16.01■□□□□ 0.15
SNRNP25-207ENST00000493672 SNRPA1P09661 255 aaKnown RBP16.01■□□□□ 0.15
SNRNP25-207ENST00000493672 EIF5P55010 431 aaKnown RBP16.01■□□□□ 0.15
SNRNP25-207ENST00000493672 TGFB2P61812 414 aa16.01■□□□□ 0.15
SNRNP25-207ENST00000493672 NPM2Q86SE8 214 aaKnown RBP16.01■□□□□ 0.15
SNRNP25-207ENST00000493672 C10orf71Q711Q0 1435 aa16.01■□□□□ 0.15
SNRNP25-207ENST00000493672 IL6STP40189 918 aaPredicted RBP16■□□□□ 0.15
SNRNP25-207ENST00000493672 WDR43Q15061 677 aaKnown RBP eCLIP16■□□□□ 0.15
SNRNP25-207ENST00000493672 YBX3P16989 372 aaKnown RBP eCLIP15.99■□□□□ 0.159e-7■□□□□ 9.3
SNRNP25-207ENST00000493672 TM4SF1P30408 202 aa15.99■□□□□ 0.15
SNRNP25-207ENST00000493672 LMOD3Q0VAK6 560 aa15.99■□□□□ 0.15
SNRNP25-207ENST00000493672 POLRMTO00411 1230 aaKnown RBP15.97■□□□□ 0.15
SNRNP25-207ENST00000493672 A1BGP04217 495 aa15.97■□□□□ 0.15
SNRNP25-207ENST00000493672 RIPK4P57078 832 aa15.97■□□□□ 0.15
SNRNP25-207ENST00000493672 DDR1Q08345 913 aa15.97■□□□□ 0.15
SNRNP25-207ENST00000493672 USP16Q9Y5T5 823 aa15.97■□□□□ 0.15
SNRNP25-207ENST00000493672 PXDNLA1KZ92 1463 aa15.97■□□□□ 0.15
SNRNP25-207ENST00000493672 KDM3BQ7LBC6 1761 aa15.96■□□□□ 0.15
SNRNP25-207ENST00000493672 RUNDC1Q96C34 613 aa15.96■□□□□ 0.15
SNRNP25-207ENST00000493672 BCL2L12Q9HB09 334 aa15.96■□□□□ 0.15
SNRNP25-207ENST00000493672 ZNF330Q9Y3S2 320 aaPredicted RBP15.96■□□□□ 0.15
SNRNP25-207ENST00000493672 ZNF316A6NFI3 1004 aaPredicted RBP15.95■□□□□ 0.14
SNRNP25-207ENST00000493672 TMPOP42166 694 aaKnown RBP15.95■□□□□ 0.14
SNRNP25-207ENST00000493672 NFIXQ14938 502 aa15.95■□□□□ 0.14
SNRNP25-207ENST00000493672 BABAM1Q9NWV8 329 aa15.95■□□□□ 0.14
SNRNP25-207ENST00000493672 KIAA1551Q9HCM1 1747 aa15.94■□□□□ 0.14
SNRNP25-207ENST00000493672 THUMPD2Q9BTF0 503 aaKnown RBP15.94■□□□□ 0.14
SNRNP25-207ENST00000493672 MIS18AQ9NYP9 233 aa15.94■□□□□ 0.14
SNRNP25-207ENST00000493672 SCN7AQ01118 1682 aa15.94■□□□□ 0.14
SNRNP25-207ENST00000493672 LAMB4A4D0S4 1761 aa15.93■□□□□ 0.14
SNRNP25-207ENST00000493672 N4BP2Q86UW6 1770 aaPredicted RBP15.93■□□□□ 0.14
SNRNP25-207ENST00000493672 A0A0G2JLW4 131 aa15.93■□□□□ 0.14
SNRNP25-207ENST00000493672 PRAMEF22A3QJZ6 481 aa15.93■□□□□ 0.14
SNRNP25-207ENST00000493672 DPEP1P16444 411 aa15.93■□□□□ 0.14
SNRNP25-207ENST00000493672 DZIP3Q86Y13 1208 aaKnown RBP15.93■□□□□ 0.14
SNRNP25-207ENST00000493672 TBC1D2BQ9UPU7 963 aa15.93■□□□□ 0.14
SNRNP25-207ENST00000493672 NRXN2Q9P2S2 1712 aa15.92■□□□□ 0.14
SNRNP25-207ENST00000493672 RGL2O15211 777 aa15.92■□□□□ 0.14
SNRNP25-207ENST00000493672 SERPINB2P05120 415 aa15.92■□□□□ 0.14
SNRNP25-207ENST00000493672 EIF4A1P60842 406 aaKnown RBP15.92■□□□□ 0.14
SNRNP25-207ENST00000493672 CCDC146Q8IYE0 955 aa15.92■□□□□ 0.14
SNRNP25-207ENST00000493672 ZNF784Q8NCA9 323 aaPredicted RBP15.92■□□□□ 0.14
SNRNP25-207ENST00000493672 ADAMTS8Q9UP79 889 aa15.92■□□□□ 0.14
SNRNP25-207ENST00000493672 AFDNP55196 1824 aaKnown RBP15.91■□□□□ 0.14
SNRNP25-207ENST00000493672 GIGYF1O75420 1035 aaPredicted RBP15.91■□□□□ 0.14
SNRNP25-207ENST00000493672 CAMTA2O94983 1202 aa15.91■□□□□ 0.14
SNRNP25-207ENST00000493672 CLEC4GQ6UXB4 293 aa15.91■□□□□ 0.14
SNRNP25-207ENST00000493672 PIM2Q9P1W9 311 aa15.91■□□□□ 0.14
SNRNP25-207ENST00000493672 TSPYL4Q9UJ04 414 aa15.91■□□□□ 0.14
SNRNP25-207ENST00000493672 WWC3Q9ULE0 1092 aa15.91■□□□□ 0.14
SNRNP25-207ENST00000493672 TBC1D9BQ66K14 1250 aa15.9■□□□□ 0.14
SNRNP25-207ENST00000493672 BICDL1Q6ZP65 573 aa15.9■□□□□ 0.14
SNRNP25-207ENST00000493672 BCS1LQ9Y276 419 aa15.9■□□□□ 0.14
SNRNP25-207ENST00000493672 ZNF652Q9Y2D9 606 aa15.9■□□□□ 0.14
SNRNP25-207ENST00000493672 BRCA1P38398 1863 aaKnown RBP15.9■□□□□ 0.14
SNRNP25-207ENST00000493672 BCORQ6W2J9 1755 aa15.9■□□□□ 0.14
SNRNP25-207ENST00000493672 CARMIL3Q8ND23 1372 aa15.89■□□□□ 0.13
SNRNP25-207ENST00000493672 NBPF26B4DH59 902 aa15.89■□□□□ 0.13
SNRNP25-207ENST00000493672 NEUROD2Q15784 382 aa15.89■□□□□ 0.13
SNRNP25-207ENST00000493672 NBPF10Q6P3W6 841 aaKnown RBP15.89■□□□□ 0.13
SNRNP25-207ENST00000493672 NBPF15Q8N660 670 aa15.89■□□□□ 0.13
SNRNP25-207ENST00000493672 SETDB2Q96T68 719 aa15.89■□□□□ 0.13
SNRNP25-207ENST00000493672 RRP7AQ9Y3A4 280 aaKnown RBP15.89■□□□□ 0.13
SNRNP25-207ENST00000493672 ERBB4Q15303 1308 aa15.89■□□□□ 0.13
SNRNP25-207ENST00000493672 KCNA3P22001 575 aa15.88■□□□□ 0.13
SNRNP25-207ENST00000493672 PIP4K2AP48426 406 aaPredicted RBP15.88■□□□□ 0.13
SNRNP25-207ENST00000493672 DALRD3Q5D0E6 543 aaKnown RBP15.88■□□□□ 0.13
SNRNP25-207ENST00000493672 PDZRN3Q9UPQ7 1066 aa15.88■□□□□ 0.13
SNRNP25-207ENST00000493672 ARFGEF1Q9Y6D6 1849 aa15.87■□□□□ 0.13
SNRNP25-207ENST00000493672 CHRNA5P30532 468 aa15.86■□□□□ 0.13
SNRNP25-207ENST00000493672 TRIM35Q9UPQ4 493 aa15.86■□□□□ 0.13
SNRNP25-207ENST00000493672 CHL1O00533 1208 aa15.85■□□□□ 0.13
SNRNP25-207ENST00000493672 NPHP1O15259 732 aa15.85■□□□□ 0.13
SNRNP25-207ENST00000493672 ANP32CO43423 234 aa15.85■□□□□ 0.13
SNRNP25-207ENST00000493672 PDE6BP35913 854 aa15.85■□□□□ 0.13
SNRNP25-207ENST00000493672 PRR5LQ6MZQ0 368 aa15.85■□□□□ 0.13
SNRNP25-207ENST00000493672 BRIP1Q9BX63 1249 aa15.85■□□□□ 0.13
SNRNP25-207ENST00000493672 DLEC1Q9Y238 1755 aa15.85■□□□□ 0.13
SNRNP25-207ENST00000493672 ERVV-1B6SEH8 477 aa15.84■□□□□ 0.13
SNRNP25-207ENST00000493672 H0YIN7 160 aa15.84■□□□□ 0.13
SNRNP25-207ENST00000493672 ST5P78524 1137 aa15.84■□□□□ 0.13
SNRNP25-207ENST00000493672 CALD1Q05682 793 aaKnown RBP15.84■□□□□ 0.13
SNRNP25-207ENST00000493672 ARHGAP27Q6ZUM4 889 aa15.84■□□□□ 0.13
SNRNP25-207ENST00000493672 C2CD5Q86YS7 1000 aa15.84■□□□□ 0.13
SNRNP25-207ENST00000493672 CNBD1Q8NA66 436 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms