RNA–Protein interactions for RNA: ENST00000493619.1

RTN4IP1-202, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 3

Gene RTN4IP1, Length 208 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-202ENST00000493619 SYT17Q9BSW7 474 aa7.87□□□□□ -1.15
RTN4IP1-202ENST00000493619 IGSF1Q8N6C5 1336 aa7.86□□□□□ -1.15
RTN4IP1-202ENST00000493619 RRS1Q15050 365 aaKnown RBP7.86□□□□□ -1.15
RTN4IP1-202ENST00000493619 PLEKHO1Q53GL0 409 aaPredicted RBP7.86□□□□□ -1.15
RTN4IP1-202ENST00000493619 SPNS2Q8IVW8 549 aa7.86□□□□□ -1.15
RTN4IP1-202ENST00000493619 LTV1Q96GA3 475 aaPredicted RBP7.86□□□□□ -1.15
RTN4IP1-202ENST00000493619 DCAF5Q96JK2 942 aa7.86□□□□□ -1.15
RTN4IP1-202ENST00000493619 AK7Q96M32 723 aa7.86□□□□□ -1.15
RTN4IP1-202ENST00000493619 TMOD3Q9NYL9 352 aa7.86□□□□□ -1.15
RTN4IP1-202ENST00000493619 KNSTRNQ9Y448 316 aa7.86□□□□□ -1.15
RTN4IP1-202ENST00000493619 TAF1LQ8IZX4 1826 aa7.86□□□□□ -1.15
RTN4IP1-202ENST00000493619 ITGB4P16144 1822 aa7.85□□□□□ -1.15
RTN4IP1-202ENST00000493619 PNPLA7Q6ZV29 1317 aa7.85□□□□□ -1.15
RTN4IP1-202ENST00000493619 RGPD2P0DJD1 1756 aa7.85□□□□□ -1.15
RTN4IP1-202ENST00000493619 ZBTB7AO95365 584 aa7.85□□□□□ -1.15
RTN4IP1-202ENST00000493619 HSP90AB2PQ58FF8 381 aa7.85□□□□□ -1.15
RTN4IP1-202ENST00000493619 RC3H1Q5TC82 1133 aaKnown RBP7.85□□□□□ -1.15
RTN4IP1-202ENST00000493619 DPY19L2Q6NUT2 758 aa7.85□□□□□ -1.15
RTN4IP1-202ENST00000493619 FHDC1Q9C0D6 1143 aaPredicted RBP7.85□□□□□ -1.15
RTN4IP1-202ENST00000493619 C4BP0C0L5 1744 aa7.85□□□□□ -1.15
RTN4IP1-202ENST00000493619 KDRP35968 1356 aa7.84□□□□□ -1.15
RTN4IP1-202ENST00000493619 EMP3P54852 163 aa7.84□□□□□ -1.15
RTN4IP1-202ENST00000493619 MMRN1Q13201 1228 aa7.84□□□□□ -1.15
RTN4IP1-202ENST00000493619 C1orf141Q5JVX7 400 aa7.84□□□□□ -1.15
RTN4IP1-202ENST00000493619 CCER1Q8TC90 406 aaPredicted RBP7.84□□□□□ -1.15
RTN4IP1-202ENST00000493619 CARD14Q9BXL6 1004 aa7.84□□□□□ -1.15
RTN4IP1-202ENST00000493619 LRRC4BQ9NT99 713 aa7.84□□□□□ -1.15
RTN4IP1-202ENST00000493619 POLKQ9UBT6 870 aa7.84□□□□□ -1.15
RTN4IP1-202ENST00000493619 TUBGCP6Q96RT7 1819 aa7.83□□□□□ -1.16
RTN4IP1-202ENST00000493619 PHKG2P15735 406 aa7.83□□□□□ -1.16
RTN4IP1-202ENST00000493619 NLGN1Q8N2Q7 840 aa7.83□□□□□ -1.16
RTN4IP1-202ENST00000493619 BOLA1Q9Y3E2 137 aa7.83□□□□□ -1.16
RTN4IP1-202ENST00000493619 CNTNAP4Q9C0A0 1308 aa7.82□□□□□ -1.16
RTN4IP1-202ENST00000493619 LOC102724428A0A0B4J2F2 783 aa7.82□□□□□ -1.16
RTN4IP1-202ENST00000493619 G3V3G9 751 aa7.82□□□□□ -1.16
RTN4IP1-202ENST00000493619 CYP27B1O15528 508 aa7.82□□□□□ -1.16
RTN4IP1-202ENST00000493619 SIK1P57059 783 aa7.82□□□□□ -1.16
RTN4IP1-202ENST00000493619 GPR162Q16538 588 aa7.82□□□□□ -1.16
RTN4IP1-202ENST00000493619 ZNF827Q17R98 1081 aa7.82□□□□□ -1.16
RTN4IP1-202ENST00000493619 MPRIPQ6WCQ1 1025 aa7.82□□□□□ -1.16
RTN4IP1-202ENST00000493619 UBR3Q6ZT12 1888 aa7.82□□□□□ -1.16
RTN4IP1-202ENST00000493619 MORC1Q86VD1 984 aa7.82□□□□□ -1.16
RTN4IP1-202ENST00000493619 EYA1Q99502 592 aa7.82□□□□□ -1.16
RTN4IP1-202ENST00000493619 PDZRN3Q9UPQ7 1066 aa7.82□□□□□ -1.16
RTN4IP1-202ENST00000493619 EMILIN1Q9Y6C2 1016 aa7.82□□□□□ -1.16
RTN4IP1-202ENST00000493619 TOGARAM1Q9Y4F4 1720 aa7.81□□□□□ -1.16
RTN4IP1-202ENST00000493619 PPM1GO15355 546 aaPredicted RBP7.81□□□□□ -1.16
RTN4IP1-202ENST00000493619 TGFB2P61812 414 aa7.81□□□□□ -1.16
RTN4IP1-202ENST00000493619 EIF4A2Q14240 407 aaKnown RBP7.81□□□□□ -1.16
RTN4IP1-202ENST00000493619 PTF1AQ7RTS3 328 aa7.81□□□□□ -1.16
RTN4IP1-202ENST00000493619 RNF25Q96BH1 459 aaPredicted RBP7.81□□□□□ -1.16
RTN4IP1-202ENST00000493619 RTCBQ9Y3I0 505 aaKnown RBP7.81□□□□□ -1.16
RTN4IP1-202ENST00000493619 AKAP4Q5JQC9 854 aa7.8□□□□□ -1.16
RTN4IP1-202ENST00000493619 PIGBQ92521 554 aa7.8□□□□□ -1.16
RTN4IP1-202ENST00000493619 TEX13AQ9BXU3 409 aaPredicted RBP7.8□□□□□ -1.16
RTN4IP1-202ENST00000493619 PCGF6Q9BYE7 350 aa7.8□□□□□ -1.16
RTN4IP1-202ENST00000493619 PANK3Q9H999 370 aa7.8□□□□□ -1.16
RTN4IP1-202ENST00000493619 MRC1P22897 1456 aa7.8□□□□□ -1.16
RTN4IP1-202ENST00000493619 KIF13BQ9NQT8 1826 aa7.8□□□□□ -1.16
RTN4IP1-202ENST00000493619 ZC3H4Q9UPT8 1303 aaKnown RBP7.79□□□□□ -1.16
RTN4IP1-202ENST00000493619 COL5A3P25940 1745 aaPredicted RBP7.79□□□□□ -1.16
RTN4IP1-202ENST00000493619 GTPBP6O43824 516 aaPredicted RBP7.79□□□□□ -1.16
RTN4IP1-202ENST00000493619 HSPA5P11021 654 aaKnown RBP7.79□□□□□ -1.16
RTN4IP1-202ENST00000493619 HS3ST6Q96QI5 342 aa7.79□□□□□ -1.16
RTN4IP1-202ENST00000493619 UTRNP46939 3433 aa7.78□□□□□ -1.16
RTN4IP1-202ENST00000493619 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.78□□□□□ -1.16
RTN4IP1-202ENST00000493619 FAM205CA6NFA0 338 aa7.78□□□□□ -1.16
RTN4IP1-202ENST00000493619 ATP6V1AP38606 617 aa7.78□□□□□ -1.16
RTN4IP1-202ENST00000493619 MTHFSP49914 203 aa7.78□□□□□ -1.16
RTN4IP1-202ENST00000493619 CABP4P57796 275 aa7.78□□□□□ -1.16
RTN4IP1-202ENST00000493619 TRAPPC3LQ5T215 181 aa7.78□□□□□ -1.16
RTN4IP1-202ENST00000493619 COL23A1Q86Y22 540 aaPredicted RBP7.78□□□□□ -1.16
RTN4IP1-202ENST00000493619 CFAP53Q96M91 514 aa7.78□□□□□ -1.16
RTN4IP1-202ENST00000493619 CCDC87Q9NVE4 849 aa7.78□□□□□ -1.16
RTN4IP1-202ENST00000493619 SCN11AQ9UI33 1791 aa7.78□□□□□ -1.16
RTN4IP1-202ENST00000493619 ADAMTS7Q9UKP4 1686 aa7.77□□□□□ -1.17
RTN4IP1-202ENST00000493619 POTEB3A0JP26 581 aa7.77□□□□□ -1.17
RTN4IP1-202ENST00000493619 GIGYF1O75420 1035 aaPredicted RBP7.77□□□□□ -1.17
RTN4IP1-202ENST00000493619 RPS6KA4O75676 772 aa7.77□□□□□ -1.17
RTN4IP1-202ENST00000493619 HOXB3P14651 431 aaPredicted RBP7.77□□□□□ -1.17
RTN4IP1-202ENST00000493619 RFC4P35249 363 aa7.77□□□□□ -1.17
RTN4IP1-202ENST00000493619 ZNF530Q6P9A1 599 aaPredicted RBP7.77□□□□□ -1.17
RTN4IP1-202ENST00000493619 POTEBQ6S5H4 581 aa7.77□□□□□ -1.17
RTN4IP1-202ENST00000493619 USHBP1Q8N6Y0 703 aa7.77□□□□□ -1.17
RTN4IP1-202ENST00000493619 ZNF784Q8NCA9 323 aaPredicted RBP7.77□□□□□ -1.17
RTN4IP1-202ENST00000493619 GAS2L2Q8NHY3 880 aa7.77□□□□□ -1.17
RTN4IP1-202ENST00000493619 PNNQ9H307 717 aaKnown RBP7.77□□□□□ -1.17
RTN4IP1-202ENST00000493619 NUDCQ9Y266 331 aa7.77□□□□□ -1.17
RTN4IP1-202ENST00000493619 A0A087WZG4 1122 aa7.76□□□□□ -1.17
RTN4IP1-202ENST00000493619 GNPATO15228 680 aa7.76□□□□□ -1.17
RTN4IP1-202ENST00000493619 DIAPH1O60610 1272 aaKnown RBP7.76□□□□□ -1.17
RTN4IP1-202ENST00000493619 NEFMP07197 916 aa7.76□□□□□ -1.17
RTN4IP1-202ENST00000493619 EFCAB3Q8N7B9 438 aa7.76□□□□□ -1.17
RTN4IP1-202ENST00000493619 KRTAP3-3Q9BYR6 98 aa7.76□□□□□ -1.17
RTN4IP1-202ENST00000493619 KRTAP3-2Q9BYR7 98 aa7.76□□□□□ -1.17
RTN4IP1-202ENST00000493619 PDGFDQ9GZP0 370 aaPredicted RBP7.76□□□□□ -1.17
RTN4IP1-202ENST00000493619 ATG3Q9NT62 314 aa7.76□□□□□ -1.17
RTN4IP1-202ENST00000493619 STARD3NLO95772 234 aa7.75□□□□□ -1.17
RTN4IP1-202ENST00000493619 IL13P35225 146 aa7.75□□□□□ -1.17
RTN4IP1-202ENST00000493619 NPM2Q86SE8 214 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms