RNA–Protein interactions for RNA: ENST00000493615.5

NECTIN3-211, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NECTIN3, Length 1,876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-211ENST00000493615 ATG3Q9NT62 314 aa24.03■■□□□ 1.44
NECTIN3-211ENST00000493615 USP16Q9Y5T5 823 aa24.03■■□□□ 1.44
NECTIN3-211ENST00000493615 ANXA1P04083 346 aa24.02■■□□□ 1.44
NECTIN3-211ENST00000493615 FAM196AQ6ZSG2 479 aa24.02■■□□□ 1.44
NECTIN3-211ENST00000493615 KCPQ6ZWJ8 1503 aa24.02■■□□□ 1.44
NECTIN3-211ENST00000493615 MVPQ14764 893 aaKnown RBP24.02■■□□□ 1.44
NECTIN3-211ENST00000493615 API5Q9BZZ5 524 aaKnown RBP24.02■■□□□ 1.44
NECTIN3-211ENST00000493615 ITGB4P16144 1822 aa24.01■■□□□ 1.43
NECTIN3-211ENST00000493615 PAPPAQ13219 1627 aa24.01■■□□□ 1.43
NECTIN3-211ENST00000493615 PHAXQ9H814 394 aaKnown RBP24.01■■□□□ 1.43
NECTIN3-211ENST00000493615 ABCC4O15439 1325 aa24.01■■□□□ 1.43
NECTIN3-211ENST00000493615 PTPRCP08575 1304 aa24.01■■□□□ 1.43
NECTIN3-211ENST00000493615 FLIIQ13045 1269 aa24■■□□□ 1.43
NECTIN3-211ENST00000493615 PROSER3Q2NL68 480 aa24■■□□□ 1.43
NECTIN3-211ENST00000493615 CHMP4AQ9BY43 222 aa24■■□□□ 1.43
NECTIN3-211ENST00000493615 C5P01031 1676 aa24■■□□□ 1.43
NECTIN3-211ENST00000493615 DOT1LQ8TEK3 1739 aa23.99■■□□□ 1.43
NECTIN3-211ENST00000493615 ITPRIPQ8IWB1 547 aa23.99■■□□□ 1.43
NECTIN3-211ENST00000493615 KCNQ2O43526 872 aa23.98■■□□□ 1.43
NECTIN3-211ENST00000493615 PDIA6Q15084 440 aa23.98■■□□□ 1.43
NECTIN3-211ENST00000493615 DBF4Q9UBU7 674 aaPredicted RBP23.98■■□□□ 1.43
NECTIN3-211ENST00000493615 UBR2Q8IWV8 1755 aa23.98■■□□□ 1.43
NECTIN3-211ENST00000493615 CCDC136Q96JN2 1154 aa23.98■■□□□ 1.43
NECTIN3-211ENST00000493615 SBF2Q86WG5 1849 aa23.98■■□□□ 1.43
NECTIN3-211ENST00000493615 F6X3S4 739 aa23.97■■□□□ 1.43
NECTIN3-211ENST00000493615 TRIM37O94972 964 aa23.97■■□□□ 1.43
NECTIN3-211ENST00000493615 PTF1AQ7RTS3 328 aa23.97■■□□□ 1.43
NECTIN3-211ENST00000493615 FKBP5Q13451 457 aaPredicted RBP23.96■■□□□ 1.43
NECTIN3-211ENST00000493615 DDX21Q9NR30 783 aaKnown RBP eCLIP23.95■■□□□ 1.42
NECTIN3-211ENST00000493615 PIP4K2AP48426 406 aaPredicted RBP23.94■■□□□ 1.42
NECTIN3-211ENST00000493615 SLC4A9Q96Q91 983 aa23.94■■□□□ 1.42
NECTIN3-211ENST00000493615 RBM42Q9BTD8 480 aaKnown RBP23.94■■□□□ 1.42
NECTIN3-211ENST00000493615 DDX19BQ9UMR2 479 aa23.94■■□□□ 1.42
NECTIN3-211ENST00000493615 CACNA1FO60840 1977 aa23.92■■□□□ 1.42
NECTIN3-211ENST00000493615 INTS3Q68E01 1043 aaKnown RBP23.92■■□□□ 1.42
NECTIN3-211ENST00000493615 MYL6BP14649 208 aa23.92■■□□□ 1.42
NECTIN3-211ENST00000493615 LRP10Q7Z4F1 713 aa23.92■■□□□ 1.42
NECTIN3-211ENST00000493615 HYPKQ9NX55 129 aa23.92■■□□□ 1.42
NECTIN3-211ENST00000493615 ZBTB7BO15156 539 aaPredicted RBP23.9■■□□□ 1.42
NECTIN3-211ENST00000493615 SLC4A10Q6U841 1118 aa23.9■■□□□ 1.42
NECTIN3-211ENST00000493615 DNAJC10Q8IXB1 793 aa23.9■■□□□ 1.42
NECTIN3-211ENST00000493615 VSIG10Q8N0Z9 540 aa23.9■■□□□ 1.42
NECTIN3-211ENST00000493615 NBPF26B4DH59 902 aa23.9■■□□□ 1.42
NECTIN3-211ENST00000493615 A1BGP04217 495 aa23.9■■□□□ 1.42
NECTIN3-211ENST00000493615 NBPF14Q5TI25 921 aa23.9■■□□□ 1.42
NECTIN3-211ENST00000493615 NBPF10Q6P3W6 841 aaKnown RBP23.9■■□□□ 1.42
NECTIN3-211ENST00000493615 NBPF15Q8N660 670 aa23.9■■□□□ 1.42
NECTIN3-211ENST00000493615 BCL11BQ9C0K0 894 aaPredicted RBP23.9■■□□□ 1.42
NECTIN3-211ENST00000493615 ZBTB40Q9NUA8 1239 aa23.9■■□□□ 1.42
NECTIN3-211ENST00000493615 NHSQ6T4R5 1651 aa23.89■■□□□ 1.42
NECTIN3-211ENST00000493615 PCDHB15Q9Y5E8 787 aa23.89■■□□□ 1.41
NECTIN3-211ENST00000493615 PI4KAP2A4QPH2 592 aa23.88■■□□□ 1.41
NECTIN3-211ENST00000493615 PI4KAP1Q8N8J0 262 aa23.88■■□□□ 1.41
NECTIN3-211ENST00000493615 AIMP1Q12904 312 aaKnown RBP23.87■■□□□ 1.41
NECTIN3-211ENST00000493615 AAMPQ13685 434 aa23.87■■□□□ 1.41
NECTIN3-211ENST00000493615 ADCY9O60503 1353 aa23.87■■□□□ 1.41
NECTIN3-211ENST00000493615 LAMB4A4D0S4 1761 aa23.87■■□□□ 1.41
NECTIN3-211ENST00000493615 XAGE3Q8WTP9 111 aa23.86■■□□□ 1.41
NECTIN3-211ENST00000493615 COPS6Q7L5N1 327 aa23.85■■□□□ 1.41
NECTIN3-211ENST00000493615 TEX13AQ9BXU3 409 aaPredicted RBP23.85■■□□□ 1.41
NECTIN3-211ENST00000493615 BTAF1O14981 1849 aa23.85■■□□□ 1.41
NECTIN3-211ENST00000493615 APBA3O96018 575 aa23.85■■□□□ 1.41
NECTIN3-211ENST00000493615 ERBB4Q15303 1308 aa23.84■■□□□ 1.41
NECTIN3-211ENST00000493615 PALLDQ8WX93 1383 aa23.84■■□□□ 1.41
NECTIN3-211ENST00000493615 CCT4P50991 539 aaKnown RBP23.84■■□□□ 1.41
NECTIN3-211ENST00000493615 UPF1Q92900 1129 aaKnown RBP eCLIP23.84■■□□□ 1.41
NECTIN3-211ENST00000493615 KSR2Q6VAB6 950 aa23.83■■□□□ 1.41
NECTIN3-211ENST00000493615 DNAAF4Q8WXU2 420 aa23.83■■□□□ 1.41
NECTIN3-211ENST00000493615 LOC102724428A0A0B4J2F2 783 aa23.83■■□□□ 1.4
NECTIN3-211ENST00000493615 CYP19A1P11511 503 aaPredicted RBP23.83■■□□□ 1.4
NECTIN3-211ENST00000493615 SIK1P57059 783 aa23.83■■□□□ 1.4
NECTIN3-211ENST00000493615 SF3B2Q13435 895 aaKnown RBP23.83■■□□□ 1.4
NECTIN3-211ENST00000493615 MAP3K2Q9Y2U5 619 aa23.83■■□□□ 1.4
NECTIN3-211ENST00000493615 TNS1Q9HBL0 1735 aaKnown RBP23.82■■□□□ 1.4
NECTIN3-211ENST00000493615 STARD3NLO95772 234 aa23.82■■□□□ 1.4
NECTIN3-211ENST00000493615 IGHDP01880 384 aa23.82■■□□□ 1.4
NECTIN3-211ENST00000493615 SMARCC1Q92922 1105 aaPredicted RBP23.82■■□□□ 1.4
NECTIN3-211ENST00000493615 MEIS3Q99687 375 aa23.81■■□□□ 1.4
NECTIN3-211ENST00000493615 C1orf115Q9H7X2 142 aa23.81■■□□□ 1.4
NECTIN3-211ENST00000493615 KDM2BQ8NHM5 1336 aa23.8■■□□□ 1.4
NECTIN3-211ENST00000493615 ATP6V1AP38606 617 aa23.8■■□□□ 1.4
NECTIN3-211ENST00000493615 ITPK1Q13572 414 aa23.8■■□□□ 1.4
NECTIN3-211ENST00000493615 BEND3Q5T5X7 828 aa23.8■■□□□ 1.4
NECTIN3-211ENST00000493615 PXDNLA1KZ92 1463 aa23.79■■□□□ 1.4
NECTIN3-211ENST00000493615 DDX58O95786 925 aaKnown RBP23.79■■□□□ 1.4
NECTIN3-211ENST00000493615 DEFB132Q7Z7B7 95 aa23.79■■□□□ 1.4
NECTIN3-211ENST00000493615 CHMP4BQ9H444 224 aaKnown RBP23.79■■□□□ 1.4
NECTIN3-211ENST00000493615 TTLL7Q6ZT98 887 aa23.78■■□□□ 1.4
NECTIN3-211ENST00000493615 ANKRD13DQ6ZTN6 518 aa23.78■■□□□ 1.4
NECTIN3-211ENST00000493615 RIC3Q7Z5B4 369 aa23.78■■□□□ 1.4
NECTIN3-211ENST00000493615 CCDC125Q86Z20 511 aa23.78■■□□□ 1.4
NECTIN3-211ENST00000493615 TJP1Q07157 1748 aa23.77■■□□□ 1.4
NECTIN3-211ENST00000493615 EN1Q05925 392 aaPredicted RBP23.77■■□□□ 1.4
NECTIN3-211ENST00000493615 SRCIN1Q9C0H9 1055 aa23.77■■□□□ 1.4
NECTIN3-211ENST00000493615 KCNQ4P56696 695 aa23.76■■□□□ 1.39
NECTIN3-211ENST00000493615 ZBTB1Q9Y2K1 713 aa23.76■■□□□ 1.39
NECTIN3-211ENST00000493615 ATP10DQ9P241 1426 aa23.75■■□□□ 1.39
NECTIN3-211ENST00000493615 USP44Q9H0E7 712 aa23.75■■□□□ 1.39
NECTIN3-211ENST00000493615 BAG6P46379 1132 aa23.75■■□□□ 1.39
NECTIN3-211ENST00000493615 ZNF330Q9Y3S2 320 aaPredicted RBP23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms