RNA–Protein interactions for RNA: ENST00000493546.1

PLXNA3-207, Transcript of plexin A3, humanhuman

TSL 3

Gene PLXNA3, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA3-207ENST00000493546 HOXB7P09629 217 aa12.86□□□□□ -0.35
PLXNA3-207ENST00000493546 ZNF827Q17R98 1081 aa12.86□□□□□ -0.35
PLXNA3-207ENST00000493546 TSPYL6Q8N831 410 aa12.85□□□□□ -0.35
PLXNA3-207ENST00000493546 SYTL4Q96C24 671 aaPredicted RBP12.85□□□□□ -0.35
PLXNA3-207ENST00000493546 LRRC4BQ9NT99 713 aa12.85□□□□□ -0.35
PLXNA3-207ENST00000493546 CEMIPQ8WUJ3 1361 aa12.84□□□□□ -0.35
PLXNA3-207ENST00000493546 BTAF1O14981 1849 aa12.84□□□□□ -0.35
PLXNA3-207ENST00000493546 TMEM57Q8N5G2 664 aa12.84□□□□□ -0.35
PLXNA3-207ENST00000493546 ARXQ96QS3 562 aa12.84□□□□□ -0.35
PLXNA3-207ENST00000493546 SGIP1Q9BQI5 828 aa12.84□□□□□ -0.35
PLXNA3-207ENST00000493546 RLBP1P12271 317 aa12.83□□□□□ -0.36
PLXNA3-207ENST00000493546 KLHL34Q8N239 644 aa12.83□□□□□ -0.36
PLXNA3-207ENST00000493546 ZBTB47Q9UFB7 747 aaPredicted RBP12.83□□□□□ -0.36
PLXNA3-207ENST00000493546 ABCC4O15439 1325 aa12.83□□□□□ -0.36
PLXNA3-207ENST00000493546 PAPPAQ13219 1627 aa12.82□□□□□ -0.36
PLXNA3-207ENST00000493546 BTBD11A6QL63 1104 aa12.82□□□□□ -0.36
PLXNA3-207ENST00000493546 CCT4P50991 539 aaKnown RBP12.82□□□□□ -0.36
PLXNA3-207ENST00000493546 KCNQ4P56696 695 aa12.82□□□□□ -0.36
PLXNA3-207ENST00000493546 HDAC1Q13547 482 aaPredicted RBP12.82□□□□□ -0.36
PLXNA3-207ENST00000493546 IFNL2Q8IZJ0 200 aa12.82□□□□□ -0.36
PLXNA3-207ENST00000493546 IL17REQ8NFR9 667 aa12.82□□□□□ -0.36
PLXNA3-207ENST00000493546 RBM19Q9Y4C8 960 aaKnown RBP12.82□□□□□ -0.36
PLXNA3-207ENST00000493546 RNMTO43148 476 aaKnown RBP12.81□□□□□ -0.36
PLXNA3-207ENST00000493546 SLC4A2P04920 1241 aa12.81□□□□□ -0.36
PLXNA3-207ENST00000493546 PRIM1P49642 420 aaKnown RBP12.81□□□□□ -0.36
PLXNA3-207ENST00000493546 SLC27A3Q5K4L6 730 aa12.81□□□□□ -0.36
PLXNA3-207ENST00000493546 HDGFL1Q5TGJ6 251 aa12.8□□□□□ -0.36
PLXNA3-207ENST00000493546 ZNF784Q8NCA9 323 aaPredicted RBP12.8□□□□□ -0.36
PLXNA3-207ENST00000493546 ZCRB1Q8TBF4 217 aaKnown RBP12.8□□□□□ -0.36
PLXNA3-207ENST00000493546 AKT1S1Q96B36 256 aa12.8□□□□□ -0.36
PLXNA3-207ENST00000493546 ZBTB40Q9NUA8 1239 aa12.8□□□□□ -0.36
PLXNA3-207ENST00000493546 TFCP2L1Q9NZI6 479 aa12.8□□□□□ -0.36
PLXNA3-207ENST00000493546 POLD1P28340 1107 aa12.79□□□□□ -0.36
PLXNA3-207ENST00000493546 ANP32AP39687 249 aaKnown RBP12.79□□□□□ -0.36
PLXNA3-207ENST00000493546 INTS3Q68E01 1043 aaKnown RBP12.79□□□□□ -0.36
PLXNA3-207ENST00000493546 DCAF5Q96JK2 942 aa12.79□□□□□ -0.36
PLXNA3-207ENST00000493546 MIS18AQ9NYP9 233 aa12.79□□□□□ -0.36
PLXNA3-207ENST00000493546 PCDH11XQ9BZA7 1347 aa12.79□□□□□ -0.36
PLXNA3-207ENST00000493546 PCDH11YQ9BZA8 1340 aa12.79□□□□□ -0.36
PLXNA3-207ENST00000493546 GPR162Q16538 588 aa12.78□□□□□ -0.36
PLXNA3-207ENST00000493546 MPRIPQ6WCQ1 1025 aa12.78□□□□□ -0.36
PLXNA3-207ENST00000493546 TTC5Q8N0Z6 440 aa12.78□□□□□ -0.36
PLXNA3-207ENST00000493546 GCC1Q96CN9 775 aa12.78□□□□□ -0.36
PLXNA3-207ENST00000493546 HDAC5Q9UQL6 1122 aa12.78□□□□□ -0.36
PLXNA3-207ENST00000493546 PNPLA7Q6ZV29 1317 aa12.78□□□□□ -0.36
PLXNA3-207ENST00000493546 GOLGB1Q14789 3259 aaKnown RBP12.78□□□□□ -0.36
PLXNA3-207ENST00000493546 MEGF6O75095 1541 aa12.78□□□□□ -0.36
PLXNA3-207ENST00000493546 MSH5O43196 834 aa12.77□□□□□ -0.37
PLXNA3-207ENST00000493546 EIF5BO60841 1220 aaKnown RBP12.77□□□□□ -0.37
PLXNA3-207ENST00000493546 HMMRO75330 724 aa12.77□□□□□ -0.37
PLXNA3-207ENST00000493546 FKBP5Q13451 457 aaPredicted RBP12.77□□□□□ -0.37
PLXNA3-207ENST00000493546 SLC16A10Q8TF71 515 aa12.77□□□□□ -0.37
PLXNA3-207ENST00000493546 CCNL1Q9UK58 526 aaPredicted RBP12.77□□□□□ -0.37
PLXNA3-207ENST00000493546 TNNQ9UQP3 1299 aa12.77□□□□□ -0.37
PLXNA3-207ENST00000493546 PHKG2P15735 406 aa12.76□□□□□ -0.37
PLXNA3-207ENST00000493546 RGS3P49796 1198 aa12.76□□□□□ -0.37
PLXNA3-207ENST00000493546 EIF4A1P60842 406 aaKnown RBP12.76□□□□□ -0.37
PLXNA3-207ENST00000493546 PCDHB15Q9Y5E8 787 aa12.76□□□□□ -0.37
PLXNA3-207ENST00000493546 DOT1LQ8TEK3 1739 aa12.76□□□□□ -0.37
PLXNA3-207ENST00000493546 RGPD2P0DJD1 1756 aa12.76□□□□□ -0.37
PLXNA3-207ENST00000493546 PXDNLA1KZ92 1463 aa12.75□□□□□ -0.37
PLXNA3-207ENST00000493546 ZBTB7BO15156 539 aaPredicted RBP12.75□□□□□ -0.37
PLXNA3-207ENST00000493546 DDX58O95786 925 aaKnown RBP12.75□□□□□ -0.37
PLXNA3-207ENST00000493546 IGHDP01880 384 aa12.75□□□□□ -0.37
PLXNA3-207ENST00000493546 GNAI3P08754 354 aa12.75□□□□□ -0.37
PLXNA3-207ENST00000493546 FLIIQ13045 1269 aa12.75□□□□□ -0.37
PLXNA3-207ENST00000493546 KRT24Q2M2I5 525 aa12.75□□□□□ -0.37
PLXNA3-207ENST00000493546 FAM161AQ3B820 660 aa12.75□□□□□ -0.37
PLXNA3-207ENST00000493546 LGR6Q9HBX8 967 aa12.75□□□□□ -0.37
PLXNA3-207ENST00000493546 DBF4Q9UBU7 674 aaPredicted RBP12.75□□□□□ -0.37
PLXNA3-207ENST00000493546 PDE4AP27815 886 aa12.74□□□□□ -0.37
PLXNA3-207ENST00000493546 CABP4P57796 275 aa12.74□□□□□ -0.37
PLXNA3-207ENST00000493546 SLC4A10Q6U841 1118 aa12.74□□□□□ -0.37
PLXNA3-207ENST00000493546 RPAP2Q8IXW5 612 aaPredicted RBP12.74□□□□□ -0.37
PLXNA3-207ENST00000493546 SLC52A2Q9HAB3 445 aa12.74□□□□□ -0.37
PLXNA3-207ENST00000493546 UPF2Q9HAU5 1272 aaKnown RBP12.74□□□□□ -0.37
PLXNA3-207ENST00000493546 NLGN2Q8NFZ4 835 aa12.73□□□□□ -0.37
PLXNA3-207ENST00000493546 SHANK3Q9BYB0 1731 aa12.73□□□□□ -0.37
PLXNA3-207ENST00000493546 EIF2S2P20042 333 aaKnown RBP12.72□□□□□ -0.37
PLXNA3-207ENST00000493546 MSL1Q68DK7 614 aa12.72□□□□□ -0.37
PLXNA3-207ENST00000493546 COL23A1Q86Y22 540 aaPredicted RBP12.72□□□□□ -0.37
PLXNA3-207ENST00000493546 BACH2Q9BYV9 841 aa12.72□□□□□ -0.37
PLXNA3-207ENST00000493546 HYPKQ9NX55 129 aa12.72□□□□□ -0.37
PLXNA3-207ENST00000493546 PDZRN3Q9UPQ7 1066 aa12.72□□□□□ -0.37
PLXNA3-207ENST00000493546 CHD4Q14839 1912 aa12.72□□□□□ -0.37
PLXNA3-207ENST00000493546 TUBGCP6Q96RT7 1819 aa12.72□□□□□ -0.37
PLXNA3-207ENST00000493546 QSER1Q2KHR3 1735 aa12.71□□□□□ -0.37
PLXNA3-207ENST00000493546 ERVV-2B6SEH9 535 aa12.71□□□□□ -0.37
PLXNA3-207ENST00000493546 SMC5Q8IY18 1101 aa12.71□□□□□ -0.37
PLXNA3-207ENST00000493546 FMNL2Q96PY5 1086 aa12.71□□□□□ -0.37
PLXNA3-207ENST00000493546 KDM3BQ7LBC6 1761 aa12.71□□□□□ -0.38
PLXNA3-207ENST00000493546 LY75O60449 1722 aa12.71□□□□□ -0.38
PLXNA3-207ENST00000493546 GNAI2P04899 355 aa12.7□□□□□ -0.38
PLXNA3-207ENST00000493546 ZNF790Q6PG37 636 aa12.7□□□□□ -0.38
PLXNA3-207ENST00000493546 ERICH6Q7L0X2 663 aa12.7□□□□□ -0.38
PLXNA3-207ENST00000493546 DDRGK1Q96HY6 314 aa12.7□□□□□ -0.38
PLXNA3-207ENST00000493546 PKD1L3Q7Z443 1732 aa12.7□□□□□ -0.38
PLXNA3-207ENST00000493546 GIGYF1O75420 1035 aaPredicted RBP12.69□□□□□ -0.38
PLXNA3-207ENST00000493546 SNRPA1P09661 255 aaKnown RBP12.69□□□□□ -0.38
PLXNA3-207ENST00000493546 NECTIN2Q92692 538 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms