RNA–Protein interactions for RNA: ENST00000493518.5

CACUL1-206, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-206ENST00000493518 CPSF1Q10570 1443 aaKnown RBP18.78■□□□□ 0.6
CACUL1-206ENST00000493518 SOS1Q07889 1333 aaPredicted RBP18.78■□□□□ 0.6
CACUL1-206ENST00000493518 LTKP29376 864 aa18.78■□□□□ 0.6
CACUL1-206ENST00000493518 KIAA2012Q0VF49 1180 aa18.78■□□□□ 0.6
CACUL1-206ENST00000493518 CHPF2Q9P2E5 772 aa18.78■□□□□ 0.6
CACUL1-206ENST00000493518 LGR6Q9HBX8 967 aa18.77■□□□□ 0.6
CACUL1-206ENST00000493518 SYT1P21579 422 aa18.77■□□□□ 0.59
CACUL1-206ENST00000493518 PDLIM2Q96JY6 352 aa18.77■□□□□ 0.59
CACUL1-206ENST00000493518 WDR33Q9C0J8 1336 aaKnown RBP18.77■□□□□ 0.59
CACUL1-206ENST00000493518 ATP7BP35670 1465 aa18.77■□□□□ 0.59
CACUL1-206ENST00000493518 ADCK5Q3MIX3 580 aa18.76■□□□□ 0.59
CACUL1-206ENST00000493518 MPRIPQ6WCQ1 1025 aa18.76■□□□□ 0.59
CACUL1-206ENST00000493518 COL9A3Q14050 684 aaPredicted RBP18.76■□□□□ 0.59
CACUL1-206ENST00000493518 SNX14Q9Y5W7 946 aa18.76■□□□□ 0.59
CACUL1-206ENST00000493518 FBXW7Q969H0 707 aa18.76■□□□□ 0.59
CACUL1-206ENST00000493518 TFIP11Q9UBB9 837 aaKnown RBP18.76■□□□□ 0.59
CACUL1-206ENST00000493518 AATKQ6ZMQ8 1374 aa18.75■□□□□ 0.59
CACUL1-206ENST00000493518 CCDC8Q9H0W5 538 aaPredicted RBP18.75■□□□□ 0.59
CACUL1-206ENST00000493518 C9orf78Q9NZ63 289 aaPredicted RBP18.75■□□□□ 0.59
CACUL1-206ENST00000493518 AMOTL2Q9Y2J4 779 aa18.75■□□□□ 0.59
CACUL1-206ENST00000493518 TMEM131LA2VDJ0 1609 aa18.75■□□□□ 0.59
CACUL1-206ENST00000493518 ARHGAP31Q2M1Z3 1444 aa18.75■□□□□ 0.59
CACUL1-206ENST00000493518 MCM2P49736 904 aa18.75■□□□□ 0.59
CACUL1-206ENST00000493518 CKAP2LQ8IYA6 745 aa18.75■□□□□ 0.59
CACUL1-206ENST00000493518 NDUFB9Q9Y6M9 179 aa18.75■□□□□ 0.59
CACUL1-206ENST00000493518 STX6O43752 255 aa18.74■□□□□ 0.59
CACUL1-206ENST00000493518 PTH1RQ03431 593 aa18.74■□□□□ 0.59
CACUL1-206ENST00000493518 CEBPZQ03701 1054 aaKnown RBP18.74■□□□□ 0.59
CACUL1-206ENST00000493518 GJB2P29033 226 aa18.74■□□□□ 0.59
CACUL1-206ENST00000493518 RUFY3Q7L099 469 aa18.74■□□□□ 0.59
CACUL1-206ENST00000493518 NAP1L2Q9ULW6 460 aaPredicted RBP18.74■□□□□ 0.59
CACUL1-206ENST00000493518 A2ML1A8K2U0 1454 aa18.74■□□□□ 0.59
CACUL1-206ENST00000493518 SETD1BQ9UPS6 1966 aaKnown RBP18.74■□□□□ 0.59
CACUL1-206ENST00000493518 DLG5Q8TDM6 1919 aa18.74■□□□□ 0.59
CACUL1-206ENST00000493518 CWF19L2Q2TBE0 894 aaKnown RBP18.74■□□□□ 0.59
CACUL1-206ENST00000493518 KLHDC4Q8TBB5 520 aa18.74■□□□□ 0.59
CACUL1-206ENST00000493518 OSBPL3Q9H4L5 887 aa18.74■□□□□ 0.59
CACUL1-206ENST00000493518 IBTKQ9P2D0 1353 aaPredicted RBP18.73■□□□□ 0.59
CACUL1-206ENST00000493518 PIP4K2AP48426 406 aaPredicted RBP18.73■□□□□ 0.59
CACUL1-206ENST00000493518 HDGFP51858 240 aaKnown RBP18.73■□□□□ 0.59
CACUL1-206ENST00000493518 DRC7Q8IY82 874 aa18.73■□□□□ 0.59
CACUL1-206ENST00000493518 CUL4AQ13619 759 aa18.72■□□□□ 0.59
CACUL1-206ENST00000493518 CNTROBQ8N137 903 aa18.72■□□□□ 0.59
CACUL1-206ENST00000493518 LRRC59Q96AG4 307 aaKnown RBP18.72■□□□□ 0.59
CACUL1-206ENST00000493518 KIAA0232Q92628 1395 aa18.72■□□□□ 0.59
CACUL1-206ENST00000493518 CRB1P82279 1406 aa18.72■□□□□ 0.59
CACUL1-206ENST00000493518 PRAMEF22A3QJZ6 481 aa18.72■□□□□ 0.59
CACUL1-206ENST00000493518 KIF20BQ96Q89 1820 aa18.72■□□□□ 0.59
CACUL1-206ENST00000493518 PHF14O94880 888 aa18.71■□□□□ 0.59
CACUL1-206ENST00000493518 IFIT2P09913 472 aaKnown RBP18.71■□□□□ 0.59
CACUL1-206ENST00000493518 ZSCAN22P10073 491 aaPredicted RBP18.71■□□□□ 0.59
CACUL1-206ENST00000493518 ZNF500O60304 480 aaPredicted RBP18.71■□□□□ 0.59
CACUL1-206ENST00000493518 HSPA4P34932 840 aa18.71■□□□□ 0.59
CACUL1-206ENST00000493518 TEFQ10587 303 aa18.71■□□□□ 0.59
CACUL1-206ENST00000493518 BOLA2Q9H3K6 86 aa18.71■□□□□ 0.59
CACUL1-206ENST00000493518 AACSQ86V21 672 aa18.7■□□□□ 0.58
CACUL1-206ENST00000493518 EDC3Q96F86 508 aaKnown RBP18.7■□□□□ 0.58
CACUL1-206ENST00000493518 PDRG1Q9NUG6 133 aa18.7■□□□□ 0.58
CACUL1-206ENST00000493518 FAM227BQ96M60 508 aa18.7■□□□□ 0.58
CACUL1-206ENST00000493518 LIMCH1Q9UPQ0 1083 aa18.7■□□□□ 0.58
CACUL1-206ENST00000493518 SGSM2O43147 1006 aa18.7■□□□□ 0.58
CACUL1-206ENST00000493518 KIF24Q5T7B8 1368 aa18.69■□□□□ 0.58
CACUL1-206ENST00000493518 GOLGA6L4A6NEF3 574 aa18.69■□□□□ 0.58
CACUL1-206ENST00000493518 CSPP1Q1MSJ5 1256 aa18.69■□□□□ 0.58
CACUL1-206ENST00000493518 CLASRPQ8N2M8 674 aaKnown RBP18.69■□□□□ 0.58
CACUL1-206ENST00000493518 IGSF3O75054 1194 aa18.68■□□□□ 0.58
CACUL1-206ENST00000493518 CBX1P83916 185 aa18.68■□□□□ 0.58
CACUL1-206ENST00000493518 CCDC183Q5T5S1 534 aa18.68■□□□□ 0.58
CACUL1-206ENST00000493518 DDX11Q96FC9 970 aa18.68■□□□□ 0.58
CACUL1-206ENST00000493518 NOLC1Q14978 699 aaKnown RBP eCLIP18.68■□□□□ 0.58
CACUL1-206ENST00000493518 SASS6Q6UVJ0 657 aa18.68■□□□□ 0.58
CACUL1-206ENST00000493518 KIF1BPQ96EK5 621 aa18.68■□□□□ 0.58
CACUL1-206ENST00000493518 ZHX1Q9UKY1 873 aaPredicted RBP18.68■□□□□ 0.58
CACUL1-206ENST00000493518 F13A1P00488 732 aa18.68■□□□□ 0.58
CACUL1-206ENST00000493518 PI4K2BQ8TCG2 481 aa18.68■□□□□ 0.58
CACUL1-206ENST00000493518 PREX1Q8TCU6 1659 aa18.68■□□□□ 0.58
CACUL1-206ENST00000493518 TCHHQ07283 1943 aa18.68■□□□□ 0.58
CACUL1-206ENST00000493518 SPDYE4A6NLX3 237 aa18.67■□□□□ 0.58
CACUL1-206ENST00000493518 CHGBP05060 677 aa18.67■□□□□ 0.58
CACUL1-206ENST00000493518 PROSER3Q2NL68 480 aa18.67■□□□□ 0.58
CACUL1-206ENST00000493518 LARP1BQ659C4 914 aaKnown RBP18.67■□□□□ 0.58
CACUL1-206ENST00000493518 INTS4Q96HW7 963 aaKnown RBP18.67■□□□□ 0.58
CACUL1-206ENST00000493518 LRRC2Q9BYS8 371 aa18.67■□□□□ 0.58
CACUL1-206ENST00000493518 SALL3Q9BXA9 1300 aa18.67■□□□□ 0.58
CACUL1-206ENST00000493518 NEO1Q92859 1461 aa18.67■□□□□ 0.58
CACUL1-206ENST00000493518 DNAAF4Q8WXU2 420 aa18.67■□□□□ 0.58
CACUL1-206ENST00000493518 TSPOAP1O95153 1857 aa18.67■□□□□ 0.58
CACUL1-206ENST00000493518 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.66■□□□□ 0.58
CACUL1-206ENST00000493518 TAF6LQ9Y6J9 622 aa18.66■□□□□ 0.58
CACUL1-206ENST00000493518 A0A087WWV3 80 aa18.66■□□□□ 0.58
CACUL1-206ENST00000493518 RAB11FIP3O75154 756 aa18.66■□□□□ 0.58
CACUL1-206ENST00000493518 HOXC9P31274 260 aa18.66■□□□□ 0.58
CACUL1-206ENST00000493518 ANAPC15P60006 121 aa18.66■□□□□ 0.58
CACUL1-206ENST00000493518 RIMS1Q86UR5 1692 aaKnown RBP18.66■□□□□ 0.58
CACUL1-206ENST00000493518 MYL6BP14649 208 aa18.66■□□□□ 0.58
CACUL1-206ENST00000493518 HS1BP3Q53T59 392 aa18.66■□□□□ 0.58
CACUL1-206ENST00000493518 LSG1Q9H089 658 aaKnown RBP18.66■□□□□ 0.58
CACUL1-206ENST00000493518 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.66■□□□□ 0.58
CACUL1-206ENST00000493518 LUZP1Q86V48 1076 aa18.65■□□□□ 0.58
CACUL1-206ENST00000493518 MAP3K2Q9Y2U5 619 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms