RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 ZCCHC2Q9C0B9 1178 aaKnown RBP7.25□□□□□ -1.25
PTCD3-218ENST00000493430 CABP1Q9NZU7 370 aa7.25□□□□□ -1.25
PTCD3-218ENST00000493430 IQSEC3Q9UPP2 1182 aaPredicted RBP7.25□□□□□ -1.25
PTCD3-218ENST00000493430 C2CD2LO14523 706 aa7.24□□□□□ -1.25
PTCD3-218ENST00000493430 TATP17735 454 aaPredicted RBP7.24□□□□□ -1.25
PTCD3-218ENST00000493430 GTF2IP78347 998 aa7.24□□□□□ -1.25
PTCD3-218ENST00000493430 NCOA4Q13772 614 aa7.24□□□□□ -1.25
PTCD3-218ENST00000493430 ZNF295-AS1Q8N0V1 137 aa7.24□□□□□ -1.25
PTCD3-218ENST00000493430 DNAAF2Q9NVR5 837 aaKnown RBP7.24□□□□□ -1.25
PTCD3-218ENST00000493430 A0A1W2PNR3 127 aa7.23□□□□□ -1.25
PTCD3-218ENST00000493430 SHISA8B8ZZ34 492 aa7.23□□□□□ -1.25
PTCD3-218ENST00000493430 ATXN7O15265 892 aaPredicted RBP7.23□□□□□ -1.25
PTCD3-218ENST00000493430 C1orf229Q6ZS94 237 aaPredicted RBP7.23□□□□□ -1.25
PTCD3-218ENST00000493430 DCAF5Q96JK2 942 aa7.23□□□□□ -1.25
PTCD3-218ENST00000493430 ZDHHC3Q9NYG2 299 aa7.23□□□□□ -1.25
PTCD3-218ENST00000493430 USP17L5A8MUK1 530 aa7.22□□□□□ -1.25
PTCD3-218ENST00000493430 SUZ12Q15022 739 aaKnown RBP7.22□□□□□ -1.25
PTCD3-218ENST00000493430 DEPDC4Q8N2C3 294 aa7.22□□□□□ -1.25
PTCD3-218ENST00000493430 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.22□□□□□ -1.25
PTCD3-218ENST00000493430 RRAGCQ9HB90 399 aa7.22□□□□□ -1.25
PTCD3-218ENST00000493430 SCHIP1Q9P0W5 487 aaPredicted RBP7.22□□□□□ -1.25
PTCD3-218ENST00000493430 GGA1Q9UJY5 639 aa7.22□□□□□ -1.25
PTCD3-218ENST00000493430 USP3Q9Y6I4 520 aa7.22□□□□□ -1.25
PTCD3-218ENST00000493430 ARAFP10398 606 aa7.21□□□□□ -1.26
PTCD3-218ENST00000493430 AMPD1P23109 780 aa7.21□□□□□ -1.26
PTCD3-218ENST00000493430 SNRPNP63162 240 aaKnown RBP7.21□□□□□ -1.26
PTCD3-218ENST00000493430 TNP2Q05952 138 aa7.21□□□□□ -1.26
PTCD3-218ENST00000493430 SLCO4C1Q6ZQN7 724 aa7.21□□□□□ -1.26
PTCD3-218ENST00000493430 TRIM50Q86XT4 487 aa7.21□□□□□ -1.26
PTCD3-218ENST00000493430 ZIC5Q96T25 663 aa7.21□□□□□ -1.26
PTCD3-218ENST00000493430 ZNF358Q9NW07 568 aa7.21□□□□□ -1.26
PTCD3-218ENST00000493430 MKL2Q9ULH7 1088 aa7.21□□□□□ -1.26
PTCD3-218ENST00000493430 GJA3Q9Y6H8 435 aa7.21□□□□□ -1.26
PTCD3-218ENST00000493430 POM121CA8CG34 1229 aa7.2□□□□□ -1.26
PTCD3-218ENST00000493430 MAPTP10636 758 aaKnown RBP7.2□□□□□ -1.26
PTCD3-218ENST00000493430 HDGFL1Q5TGJ6 251 aa7.2□□□□□ -1.26
PTCD3-218ENST00000493430 BICDL1Q6ZP65 573 aa7.2□□□□□ -1.26
PTCD3-218ENST00000493430 PARP3Q9Y6F1 533 aa7.2□□□□□ -1.26
PTCD3-218ENST00000493430 DCDC2BA2VCK2 349 aa7.19□□□□□ -1.26
PTCD3-218ENST00000493430 KHNYNO15037 678 aaKnown RBP7.19□□□□□ -1.26
PTCD3-218ENST00000493430 ATP1A2P50993 1020 aa7.19□□□□□ -1.26
PTCD3-218ENST00000493430 TEAD4Q15561 434 aa7.19□□□□□ -1.26
PTCD3-218ENST00000493430 PLA2G4EQ3MJ16 856 aa7.19□□□□□ -1.26
PTCD3-218ENST00000493430 FAM182BQ5T319 152 aa7.19□□□□□ -1.26
PTCD3-218ENST00000493430 L3MBTL2Q969R5 705 aa7.19□□□□□ -1.26
PTCD3-218ENST00000493430 NEURL1BA8MQ27 555 aa7.18□□□□□ -1.26
PTCD3-218ENST00000493430 MSTNO14793 375 aa7.18□□□□□ -1.26
PTCD3-218ENST00000493430 EPXP11678 715 aa7.18□□□□□ -1.26
PTCD3-218ENST00000493430 CD33P20138 364 aa7.18□□□□□ -1.26
PTCD3-218ENST00000493430 NOS2P35228 1153 aa7.18□□□□□ -1.26
PTCD3-218ENST00000493430 PLEKHM2Q8IWE5 1019 aa7.18□□□□□ -1.26
PTCD3-218ENST00000493430 TNS4Q8IZW8 715 aa7.18□□□□□ -1.26
PTCD3-218ENST00000493430 ADAMTS19Q8TE59 1207 aa7.18□□□□□ -1.26
PTCD3-218ENST00000493430 BTBD6Q96KE9 485 aa7.18□□□□□ -1.26
PTCD3-218ENST00000493430 USP17L3A6NCW0 530 aa7.17□□□□□ -1.26
PTCD3-218ENST00000493430 USP17L4A6NCW7 530 aa7.17□□□□□ -1.26
PTCD3-218ENST00000493430 PIK3R2O00459 728 aa7.17□□□□□ -1.26
PTCD3-218ENST00000493430 FAM157BP0CG42 384 aa7.17□□□□□ -1.26
PTCD3-218ENST00000493430 ADH6P28332 368 aa7.17□□□□□ -1.26
PTCD3-218ENST00000493430 TXLNAP40222 546 aa7.17□□□□□ -1.26
PTCD3-218ENST00000493430 EPHA4P54764 986 aa7.17□□□□□ -1.26
PTCD3-218ENST00000493430 SAMD5Q5TGI4 173 aa7.17□□□□□ -1.26
PTCD3-218ENST00000493430 USP17L2Q6R6M4 530 aa7.17□□□□□ -1.26
PTCD3-218ENST00000493430 USP17L1Q7RTZ2 530 aa7.17□□□□□ -1.26
PTCD3-218ENST00000493430 ALYREFQ86V81 257 aaKnown RBP7.17□□□□□ -1.26
PTCD3-218ENST00000493430 ZDHHC1Q8WTX9 485 aa7.17□□□□□ -1.26
PTCD3-218ENST00000493430 AVENQ9NQS1 362 aaPredicted RBP7.17□□□□□ -1.26
PTCD3-218ENST00000493430 ZNF232Q9UNY5 417 aa7.17□□□□□ -1.26
PTCD3-218ENST00000493430 ZBTB7BO15156 539 aaPredicted RBP7.16□□□□□ -1.26
PTCD3-218ENST00000493430 ATP9BO43861 1147 aa7.16□□□□□ -1.26
PTCD3-218ENST00000493430 LAMC2Q13753 1193 aa7.16□□□□□ -1.26
PTCD3-218ENST00000493430 CCDC102BQ68D86 513 aa7.16□□□□□ -1.26
PTCD3-218ENST00000493430 LINC00114Q6XXX2 140 aa7.16□□□□□ -1.26
PTCD3-218ENST00000493430 SLC9A9Q8IVB4 645 aa7.16□□□□□ -1.26
PTCD3-218ENST00000493430 TPCN2Q8NHX9 752 aa7.16□□□□□ -1.26
PTCD3-218ENST00000493430 NEUROD4Q9HD90 331 aa7.16□□□□□ -1.26
PTCD3-218ENST00000493430 PRR12Q9ULL5 1215 aa7.16□□□□□ -1.26
PTCD3-218ENST00000493430 SERTM1A2A2V5 107 aa7.15□□□□□ -1.26
PTCD3-218ENST00000493430 CLDN10P78369 228 aa7.15□□□□□ -1.26
PTCD3-218ENST00000493430 TBCELQ5QJ74 424 aa7.15□□□□□ -1.26
PTCD3-218ENST00000493430 UCN2Q96RP3 112 aa7.15□□□□□ -1.26
PTCD3-218ENST00000493430 SPOCK3Q9BQ16 436 aa7.15□□□□□ -1.26
PTCD3-218ENST00000493430 MARK1Q9P0L2 795 aa7.15□□□□□ -1.26
PTCD3-218ENST00000493430 HCN2Q9UL51 889 aa7.15□□□□□ -1.26
PTCD3-218ENST00000493430 PALM3A6NDB9 673 aaPredicted RBP7.14□□□□□ -1.27
PTCD3-218ENST00000493430 EML1O00423 815 aa7.14□□□□□ -1.27
PTCD3-218ENST00000493430 GNB5O14775 395 aa7.14□□□□□ -1.27
PTCD3-218ENST00000493430 HOXB4P17483 251 aaPredicted RBP7.14□□□□□ -1.27
PTCD3-218ENST00000493430 LRRC69Q6ZNQ3 347 aa7.14□□□□□ -1.27
PTCD3-218ENST00000493430 LARGE2Q8N3Y3 721 aa7.14□□□□□ -1.27
PTCD3-218ENST00000493430 OGFOD1Q8N543 542 aa7.14□□□□□ -1.27
PTCD3-218ENST00000493430 MKRN1Q9UHC7 482 aaKnown RBP7.14□□□□□ -1.27
PTCD3-218ENST00000493430 KLF15Q9UIH9 416 aa7.14□□□□□ -1.27
PTCD3-218ENST00000493430 KIAA1024Q9UPX6 916 aa7.14□□□□□ -1.27
PTCD3-218ENST00000493430 CHMP3Q9Y3E7 222 aa7.14□□□□□ -1.27
PTCD3-218ENST00000493430 GPC6Q9Y625 555 aaPredicted RBP7.14□□□□□ -1.27
PTCD3-218ENST00000493430 LOC100996750A0A140TA64 210 aa7.13□□□□□ -1.27
PTCD3-218ENST00000493430 M0R2N6 131 aa7.13□□□□□ -1.27
PTCD3-218ENST00000493430 EFSO43281 561 aa7.13□□□□□ -1.27
PTCD3-218ENST00000493430 ITGB2P05107 769 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms