RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 EZH2Q15910 746 aaKnown RBP14.86□□□□□ -0.03
LSM2-214ENST00000493387 HDGFL1Q5TGJ6 251 aa14.86□□□□□ -0.03
LSM2-214ENST00000493387 DEFB132Q7Z7B7 95 aa14.86□□□□□ -0.03
LSM2-214ENST00000493387 CNTNAP4Q9C0A0 1308 aa14.86□□□□□ -0.03
LSM2-214ENST00000493387 PRAMEF22A3QJZ6 481 aa14.85□□□□□ -0.03
LSM2-214ENST00000493387 STK31Q9BXU1 1019 aa14.85□□□□□ -0.03
LSM2-214ENST00000493387 LRRC4BQ9NT99 713 aa14.85□□□□□ -0.03
LSM2-214ENST00000493387 CCDC87Q9NVE4 849 aa14.85□□□□□ -0.03
LSM2-214ENST00000493387 CICQ96RK0 1608 aaPredicted RBP14.84□□□□□ -0.03
LSM2-214ENST00000493387 CRKLP46109 303 aaKnown RBP14.84□□□□□ -0.03
LSM2-214ENST00000493387 ALDH1L2Q3SY69 923 aa14.84□□□□□ -0.03
LSM2-214ENST00000493387 LINC00116Q8NCU8 138 aa14.84□□□□□ -0.03
LSM2-214ENST00000493387 DBF4Q9UBU7 674 aaPredicted RBP14.84□□□□□ -0.03
LSM2-214ENST00000493387 KCNQ4P56696 695 aa14.83□□□□□ -0.04
LSM2-214ENST00000493387 NPM2Q86SE8 214 aaKnown RBP14.83□□□□□ -0.04
LSM2-214ENST00000493387 AK7Q96M32 723 aa14.83□□□□□ -0.04
LSM2-214ENST00000493387 DDX21Q9NR30 783 aaKnown RBP eCLIP14.83□□□□□ -0.04
LSM2-214ENST00000493387 A1BGP04217 495 aa14.82□□□□□ -0.04
LSM2-214ENST00000493387 NBPF14Q5TI25 921 aa14.82□□□□□ -0.04
LSM2-214ENST00000493387 INTS5Q6P9B9 1019 aaKnown RBP14.82□□□□□ -0.04
LSM2-214ENST00000493387 HYPKQ9NX55 129 aa14.82□□□□□ -0.04
LSM2-214ENST00000493387 C5P01031 1676 aa14.81□□□□□ -0.04
LSM2-214ENST00000493387 RPS6KA4O75676 772 aa14.81□□□□□ -0.04
LSM2-214ENST00000493387 IL6STP40189 918 aaPredicted RBP14.81□□□□□ -0.04
LSM2-214ENST00000493387 NECTIN2Q92692 538 aa14.81□□□□□ -0.04
LSM2-214ENST00000493387 STK32BQ9NY57 414 aa14.81□□□□□ -0.04
LSM2-214ENST00000493387 TJP1Q07157 1748 aa14.8□□□□□ -0.04
LSM2-214ENST00000493387 A0A087WZG4 1122 aa14.8□□□□□ -0.04
LSM2-214ENST00000493387 GNPATO15228 680 aa14.8□□□□□ -0.04
LSM2-214ENST00000493387 CANXP27824 592 aaKnown RBP14.8□□□□□ -0.04
LSM2-214ENST00000493387 RARSP54136 660 aaKnown RBP14.8□□□□□ -0.04
LSM2-214ENST00000493387 FLAD1Q8NFF5 587 aa14.8□□□□□ -0.04
LSM2-214ENST00000493387 CHPF2Q9P2E5 772 aa14.8□□□□□ -0.04
LSM2-214ENST00000493387 RTCBQ9Y3I0 505 aaKnown RBP14.8□□□□□ -0.04
LSM2-214ENST00000493387 LAMB4A4D0S4 1761 aa14.8□□□□□ -0.04
LSM2-214ENST00000493387 NBPF26B4DH59 902 aa14.79□□□□□ -0.04
LSM2-214ENST00000493387 SOCS7O14512 581 aa14.79□□□□□ -0.04
LSM2-214ENST00000493387 SLC4A2P04920 1241 aa14.79□□□□□ -0.04
LSM2-214ENST00000493387 BRPF1P55201 1214 aaPredicted RBP14.79□□□□□ -0.04
LSM2-214ENST00000493387 PDIA6Q15084 440 aa14.79□□□□□ -0.04
LSM2-214ENST00000493387 NBPF10Q6P3W6 841 aaKnown RBP14.79□□□□□ -0.04
LSM2-214ENST00000493387 NBPF15Q8N660 670 aa14.79□□□□□ -0.04
LSM2-214ENST00000493387 SSH1Q8WYL5 1049 aa14.79□□□□□ -0.04
LSM2-214ENST00000493387 AKT1S1Q96B36 256 aa14.79□□□□□ -0.04
LSM2-214ENST00000493387 SMC4Q9NTJ3 1288 aa14.79□□□□□ -0.04
LSM2-214ENST00000493387 RCAN3Q9UKA8 241 aa14.79□□□□□ -0.04
LSM2-214ENST00000493387 ZBTB1Q9Y2K1 713 aa14.79□□□□□ -0.04
LSM2-214ENST00000493387 CENPBP07199 599 aaPredicted RBP14.78□□□□□ -0.04
LSM2-214ENST00000493387 SSFA2P28290 1259 aa14.78□□□□□ -0.04
LSM2-214ENST00000493387 EIF5P55010 431 aaKnown RBP14.78□□□□□ -0.04
LSM2-214ENST00000493387 TFCP2L1Q9NZI6 479 aa14.78□□□□□ -0.04
LSM2-214ENST00000493387 TAF1LQ8IZX4 1826 aa14.78□□□□□ -0.04
LSM2-214ENST00000493387 C4BP0C0L5 1744 aa14.78□□□□□ -0.04
LSM2-214ENST00000493387 COL5A3P25940 1745 aaPredicted RBP14.78□□□□□ -0.04
LSM2-214ENST00000493387 MYL6BP14649 208 aa14.77□□□□□ -0.05
LSM2-214ENST00000493387 SLC15A2Q16348 729 aa14.77□□□□□ -0.05
LSM2-214ENST00000493387 TRAPPC3LQ5T215 181 aa14.77□□□□□ -0.05
LSM2-214ENST00000493387 MRPL50Q8N5N7 158 aaKnown RBP14.77□□□□□ -0.05
LSM2-214ENST00000493387 RREB1Q92766 1687 aa14.77□□□□□ -0.05
LSM2-214ENST00000493387 CACNA1FO60840 1977 aa14.76□□□□□ -0.05
LSM2-214ENST00000493387 TCERG1O14776 1098 aaKnown RBP14.76□□□□□ -0.05
LSM2-214ENST00000493387 IPO8O15397 1037 aaKnown RBP14.76□□□□□ -0.05
LSM2-214ENST00000493387 DDX58O95786 925 aaKnown RBP14.76□□□□□ -0.05
LSM2-214ENST00000493387 PROSER3Q2NL68 480 aa14.76□□□□□ -0.05
LSM2-214ENST00000493387 KIF16BQ96L93 1317 aa14.75□□□□□ -0.05
LSM2-214ENST00000493387 MYH14Q7Z406 1995 aaKnown RBP14.75□□□□□ -0.05
LSM2-214ENST00000493387 RGL2O15211 777 aa14.75□□□□□ -0.05
LSM2-214ENST00000493387 PIP4K2AP48426 406 aaPredicted RBP14.75□□□□□ -0.05
LSM2-214ENST00000493387 ZNF827Q17R98 1081 aa14.75□□□□□ -0.05
LSM2-214ENST00000493387 KIF6Q6ZMV9 814 aa14.75□□□□□ -0.05
LSM2-214ENST00000493387 COPS6Q7L5N1 327 aa14.75□□□□□ -0.05
LSM2-214ENST00000493387 LRP10Q7Z4F1 713 aa14.75□□□□□ -0.05
LSM2-214ENST00000493387 ZNF330Q9Y3S2 320 aaPredicted RBP14.75□□□□□ -0.05
LSM2-214ENST00000493387 PTPRCP08575 1304 aa14.74□□□□□ -0.05
LSM2-214ENST00000493387 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.74□□□□□ -0.05
LSM2-214ENST00000493387 ANXA1P04083 346 aa14.74□□□□□ -0.05
LSM2-214ENST00000493387 RFC4P35249 363 aa14.74□□□□□ -0.05
LSM2-214ENST00000493387 FLIIQ13045 1269 aa14.74□□□□□ -0.05
LSM2-214ENST00000493387 DZIP3Q86Y13 1208 aaKnown RBP14.74□□□□□ -0.05
LSM2-214ENST00000493387 XAGE3Q8WTP9 111 aa14.74□□□□□ -0.05
LSM2-214ENST00000493387 ARHGAP45Q92619 1136 aa14.74□□□□□ -0.05
LSM2-214ENST00000493387 BCL2L13Q9BXK5 485 aa14.74□□□□□ -0.05
LSM2-214ENST00000493387 EP400Q96L91 3159 aa14.74□□□□□ -0.05
LSM2-214ENST00000493387 COL15A1P39059 1388 aa14.73□□□□□ -0.05
LSM2-214ENST00000493387 NUP188Q5SRE5 1749 aa14.73□□□□□ -0.05
LSM2-214ENST00000493387 ERVV-1B6SEH8 477 aa14.73□□□□□ -0.05
LSM2-214ENST00000493387 ZPR1O75312 459 aa14.73□□□□□ -0.05
LSM2-214ENST00000493387 AIMP1Q12904 312 aaKnown RBP14.73□□□□□ -0.05
LSM2-214ENST00000493387 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.73□□□□□ -0.05
LSM2-214ENST00000493387 ARHGEF1Q92888 912 aaKnown RBP14.73□□□□□ -0.05
LSM2-214ENST00000493387 ARXQ96QS3 562 aa14.73□□□□□ -0.05
LSM2-214ENST00000493387 PHAXQ9H814 394 aaKnown RBP14.73□□□□□ -0.05
LSM2-214ENST00000493387 ANO8Q9HCE9 1232 aaPredicted RBP14.73□□□□□ -0.05
LSM2-214ENST00000493387 BCAR3O75815 825 aa14.72□□□□□ -0.05
LSM2-214ENST00000493387 PHF14O94880 888 aa14.72□□□□□ -0.05
LSM2-214ENST00000493387 FKBP5Q13451 457 aaPredicted RBP14.72□□□□□ -0.05
LSM2-214ENST00000493387 ANKRD13DQ6ZTN6 518 aa14.72□□□□□ -0.05
LSM2-214ENST00000493387 PLBD2Q8NHP8 589 aa14.72□□□□□ -0.05
LSM2-214ENST00000493387 API5Q9BZZ5 524 aaKnown RBP14.72□□□□□ -0.05
LSM2-214ENST00000493387 NARFQ9UHQ1 456 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms