RNA–Protein interactions for RNA: ENST00000493298.1

TM4SF1-203, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 4

Gene TM4SF1, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-203ENST00000493298 DLEC1Q9Y238 1755 aa11.9□□□□□ -0.5
TM4SF1-203ENST00000493298 GNPATO15228 680 aa11.9□□□□□ -0.5
TM4SF1-203ENST00000493298 ANKRD31Q8N7Z5 1873 aa11.9□□□□□ -0.5
TM4SF1-203ENST00000493298 AK7Q96M32 723 aa11.9□□□□□ -0.5
TM4SF1-203ENST00000493298 ARFGEF1Q9Y6D6 1849 aa11.9□□□□□ -0.5
TM4SF1-203ENST00000493298 PTCD1O75127 700 aaKnown RBP11.89□□□□□ -0.51
TM4SF1-203ENST00000493298 RPS6KA4O75676 772 aa11.89□□□□□ -0.51
TM4SF1-203ENST00000493298 PHF14O94880 888 aa11.89□□□□□ -0.51
TM4SF1-203ENST00000493298 CRKLP46109 303 aaKnown RBP11.89□□□□□ -0.51
TM4SF1-203ENST00000493298 MCM10Q7L590 875 aa11.89□□□□□ -0.51
TM4SF1-203ENST00000493298 WDR63Q8IWG1 891 aa11.89□□□□□ -0.51
TM4SF1-203ENST00000493298 FLAD1Q8NFF5 587 aa11.89□□□□□ -0.51
TM4SF1-203ENST00000493298 CYP19A1P11511 503 aaPredicted RBP11.88□□□□□ -0.51
TM4SF1-203ENST00000493298 DNAJC10Q8IXB1 793 aa11.88□□□□□ -0.51
TM4SF1-203ENST00000493298 NGEFQ8N5V2 710 aa11.88□□□□□ -0.51
TM4SF1-203ENST00000493298 ARHGEF1Q92888 912 aaKnown RBP11.88□□□□□ -0.51
TM4SF1-203ENST00000493298 RBM42Q9BTD8 480 aaKnown RBP11.88□□□□□ -0.51
TM4SF1-203ENST00000493298 C10orf71Q711Q0 1435 aa11.87□□□□□ -0.51
TM4SF1-203ENST00000493298 GNAT3A8MTJ3 354 aa11.87□□□□□ -0.51
TM4SF1-203ENST00000493298 KCNQ3O43525 872 aa11.87□□□□□ -0.51
TM4SF1-203ENST00000493298 GYS1P13807 737 aa11.87□□□□□ -0.51
TM4SF1-203ENST00000493298 GOLGA2Q08379 1002 aa11.87□□□□□ -0.51
TM4SF1-203ENST00000493298 PXDNLA1KZ92 1463 aa11.87□□□□□ -0.51
TM4SF1-203ENST00000493298 SOS1Q07889 1333 aaPredicted RBP11.86□□□□□ -0.51
TM4SF1-203ENST00000493298 MAPK8IP3Q9UPT6 1336 aa11.86□□□□□ -0.51
TM4SF1-203ENST00000493298 CHL1O00533 1208 aa11.86□□□□□ -0.51
TM4SF1-203ENST00000493298 YBX3P16989 372 aaKnown RBP eCLIP11.86□□□□□ -0.51
TM4SF1-203ENST00000493298 ADRA2BP18089 450 aa11.86□□□□□ -0.51
TM4SF1-203ENST00000493298 GAS2L2Q8NHY3 880 aa11.86□□□□□ -0.51
TM4SF1-203ENST00000493298 ZNF496Q96IT1 587 aaPredicted RBP11.86□□□□□ -0.51
TM4SF1-203ENST00000493298 PNNQ9H307 717 aaKnown RBP11.86□□□□□ -0.51
TM4SF1-203ENST00000493298 IL16Q14005 1332 aa11.86□□□□□ -0.51
TM4SF1-203ENST00000493298 USP42Q9H9J4 1324 aaKnown RBP11.86□□□□□ -0.51
TM4SF1-203ENST00000493298 SBF1O95248 1867 aa11.85□□□□□ -0.51
TM4SF1-203ENST00000493298 HEG1Q9ULI3 1381 aa11.85□□□□□ -0.51
TM4SF1-203ENST00000493298 HMGB2P26583 209 aaKnown RBP11.85□□□□□ -0.51
TM4SF1-203ENST00000493298 POLD1P28340 1107 aa11.85□□□□□ -0.51
TM4SF1-203ENST00000493298 ZNF790Q6PG37 636 aa11.85□□□□□ -0.51
TM4SF1-203ENST00000493298 VSIG10Q8N0Z9 540 aa11.85□□□□□ -0.51
TM4SF1-203ENST00000493298 TSR2Q969E8 191 aaKnown RBP11.85□□□□□ -0.51
TM4SF1-203ENST00000493298 BCL2L12Q9HB09 334 aa11.85□□□□□ -0.51
TM4SF1-203ENST00000493298 MIS18AQ9NYP9 233 aa11.85□□□□□ -0.51
TM4SF1-203ENST00000493298 RTCBQ9Y3I0 505 aaKnown RBP11.85□□□□□ -0.51
TM4SF1-203ENST00000493298 CD2APQ9Y5K6 639 aa11.85□□□□□ -0.51
TM4SF1-203ENST00000493298 COL11A2P13942 1736 aaPredicted RBP11.85□□□□□ -0.51
TM4SF1-203ENST00000493298 FANCIQ9NVI1 1328 aa11.85□□□□□ -0.51
TM4SF1-203ENST00000493298 CEP350Q5VT06 3117 aa11.84□□□□□ -0.51
TM4SF1-203ENST00000493298 HTATSF1O43719 755 aaKnown RBP11.84□□□□□ -0.51
TM4SF1-203ENST00000493298 DDR1Q08345 913 aa11.84□□□□□ -0.51
TM4SF1-203ENST00000493298 KRT24Q2M2I5 525 aa11.84□□□□□ -0.51
TM4SF1-203ENST00000493298 SRP68Q9UHB9 627 aaKnown RBP11.84□□□□□ -0.51
TM4SF1-203ENST00000493298 ZBTB1Q9Y2K1 713 aa11.84□□□□□ -0.51
TM4SF1-203ENST00000493298 RNF123Q5XPI4 1314 aa11.84□□□□□ -0.51
TM4SF1-203ENST00000493298 NUP98P52948 1817 aa11.83□□□□□ -0.51
TM4SF1-203ENST00000493298 MSH5O43196 834 aa11.83□□□□□ -0.52
TM4SF1-203ENST00000493298 MMP10P09238 476 aa11.83□□□□□ -0.52
TM4SF1-203ENST00000493298 FKBP8Q14318 412 aa11.83□□□□□ -0.52
TM4SF1-203ENST00000493298 TRAPPC3LQ5T215 181 aa11.83□□□□□ -0.52
TM4SF1-203ENST00000493298 TSPYL6Q8N831 410 aa11.83□□□□□ -0.52
TM4SF1-203ENST00000493298 MBIPQ9NS73 344 aa11.83□□□□□ -0.52
TM4SF1-203ENST00000493298 CCDC87Q9NVE4 849 aa11.83□□□□□ -0.52
TM4SF1-203ENST00000493298 COL15A1P39059 1388 aa11.82□□□□□ -0.52
TM4SF1-203ENST00000493298 PRAMEF22A3QJZ6 481 aa11.82□□□□□ -0.52
TM4SF1-203ENST00000493298 E9PSI1 815 aa11.82□□□□□ -0.52
TM4SF1-203ENST00000493298 TM4SF1P30408 202 aa11.82□□□□□ -0.52
TM4SF1-203ENST00000493298 EIF5P55010 431 aaKnown RBP11.82□□□□□ -0.52
TM4SF1-203ENST00000493298 C8orf58Q8NAV2 365 aa11.82□□□□□ -0.52
TM4SF1-203ENST00000493298 KCNA3P22001 575 aa11.81□□□□□ -0.52
TM4SF1-203ENST00000493298 CFAP44Q96MT7 982 aa11.81□□□□□ -0.52
TM4SF1-203ENST00000493298 IFT57Q9NWB7 429 aa11.81□□□□□ -0.52
TM4SF1-203ENST00000493298 ARFGEF2Q9Y6D5 1785 aa11.81□□□□□ -0.52
TM4SF1-203ENST00000493298 CCDC88AQ3V6T2 1871 aa11.8□□□□□ -0.52
TM4SF1-203ENST00000493298 EXOSC9Q06265 439 aaKnown RBP11.8□□□□□ -0.52
TM4SF1-203ENST00000493298 ADCY9O60503 1353 aa11.79□□□□□ -0.52
TM4SF1-203ENST00000493298 CACNA1SQ13698 1873 aa11.79□□□□□ -0.52
TM4SF1-203ENST00000493298 POLRMTO00411 1230 aaKnown RBP11.79□□□□□ -0.52
TM4SF1-203ENST00000493298 VAMP4O75379 141 aa11.79□□□□□ -0.52
TM4SF1-203ENST00000493298 NLGN1Q8N2Q7 840 aa11.79□□□□□ -0.52
TM4SF1-203ENST00000493298 USP16Q9Y5T5 823 aa11.79□□□□□ -0.52
TM4SF1-203ENST00000493298 NBPF26B4DH59 902 aa11.78□□□□□ -0.52
TM4SF1-203ENST00000493298 YY1P25490 414 aa11.78□□□□□ -0.52
TM4SF1-203ENST00000493298 RFC4P35249 363 aa11.78□□□□□ -0.52
TM4SF1-203ENST00000493298 TEFQ10587 303 aa11.78□□□□□ -0.52
TM4SF1-203ENST00000493298 NBPF10Q6P3W6 841 aaKnown RBP11.78□□□□□ -0.52
TM4SF1-203ENST00000493298 NBPF15Q8N660 670 aa11.78□□□□□ -0.52
TM4SF1-203ENST00000493298 NARFQ9UHQ1 456 aa11.78□□□□□ -0.52
TM4SF1-203ENST00000493298 CARMIL3Q8ND23 1372 aa11.78□□□□□ -0.52
TM4SF1-203ENST00000493298 FER1L6Q2WGJ9 1857 aa11.77□□□□□ -0.53
TM4SF1-203ENST00000493298 BTBD11A6QL63 1104 aa11.77□□□□□ -0.53
TM4SF1-203ENST00000493298 BCAR3O75815 825 aa11.77□□□□□ -0.53
TM4SF1-203ENST00000493298 A1BGP04217 495 aa11.77□□□□□ -0.53
TM4SF1-203ENST00000493298 NFIXQ14938 502 aa11.77□□□□□ -0.53
TM4SF1-203ENST00000493298 TAF7Q15545 349 aaPredicted RBP11.77□□□□□ -0.53
TM4SF1-203ENST00000493298 USPL1Q5W0Q7 1092 aa11.77□□□□□ -0.53
TM4SF1-203ENST00000493298 KLHL34Q8N239 644 aa11.77□□□□□ -0.53
TM4SF1-203ENST00000493298 SUPT16HQ9Y5B9 1047 aaKnown RBP11.77□□□□□ -0.53
TM4SF1-203ENST00000493298 ANKRD36CQ5JPF3 1778 aa11.77□□□□□ -0.53
TM4SF1-203ENST00000493298 CENPBP07199 599 aaPredicted RBP11.76□□□□□ -0.53
TM4SF1-203ENST00000493298 GNAI1P63096 354 aa11.76□□□□□ -0.53
TM4SF1-203ENST00000493298 LMOD3Q0VAK6 560 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 178.5 ms